RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 SPART-AS1P0CW21 52 aa1.06□□□□□ -2.24
HMGB3P30-201ENST00000457863 CHD8Q9HCK8 2581 aa1.06□□□□□ -2.24
HMGB3P30-201ENST00000457863 MAP1BP46821 2468 aaKnown RBP1.05□□□□□ -2.24
HMGB3P30-201ENST00000457863 DEFB136Q30KP8 78 aa1.05□□□□□ -2.24
HMGB3P30-201ENST00000457863 DNAH12Q6ZR08 3092 aa1.05□□□□□ -2.24
HMGB3P30-201ENST00000457863 NBEAQ8NFP9 2946 aa1.05□□□□□ -2.24
HMGB3P30-201ENST00000457863 BSNQ9UPA5 3926 aa1.05□□□□□ -2.24
HMGB3P30-201ENST00000457863 SRRM2Q9UQ35 2752 aaKnown RBP1.04□□□□□ -2.24
HMGB3P30-201ENST00000457863 WDR87Q6ZQQ6 2873 aa1.04□□□□□ -2.24
HMGB3P30-201ENST00000457863 EP400Q96L91 3159 aa1.04□□□□□ -2.24
HMGB3P30-201ENST00000457863 CENPFP49454 3210 aa1.04□□□□□ -2.24
HMGB3P30-201ENST00000457863 GOLGB1Q14789 3259 aaKnown RBP1.04□□□□□ -2.24
HMGB3P30-201ENST00000457863 COL6A5A8TX70 2615 aa1.03□□□□□ -2.24
HMGB3P30-201ENST00000457863 CCDC168Q8NDH2 2452 aa1.03□□□□□ -2.24
HMGB3P30-201ENST00000457863 KRTAP2-3P0C7H8 128 aa1.03□□□□□ -2.24
HMGB3P30-201ENST00000457863 KRTAP2-4Q9BYR9 128 aa1.03□□□□□ -2.24
HMGB3P30-201ENST00000457863 KRTAP2-1Q9BYU5 128 aa1.03□□□□□ -2.24
HMGB3P30-201ENST00000457863 TNXBP22105 4242 aa1.03□□□□□ -2.24
HMGB3P30-201ENST00000457863 CELSR1Q9NYQ6 3014 aa1.02□□□□□ -2.25
HMGB3P30-201ENST00000457863 PCNTO95613 3336 aa1.02□□□□□ -2.25
HMGB3P30-201ENST00000457863 UBR5O95071 2799 aaPredicted RBP1.02□□□□□ -2.25
HMGB3P30-201ENST00000457863 TNP1P09430 55 aa1.02□□□□□ -2.25
HMGB3P30-201ENST00000457863 CEP350Q5VT06 3117 aa1.02□□□□□ -2.25
HMGB3P30-201ENST00000457863 PRKDCP78527 4128 aaKnown RBP1.02□□□□□ -2.25
HMGB3P30-201ENST00000457863 FBN2P35556 2912 aa1.02□□□□□ -2.25
HMGB3P30-201ENST00000457863 DMBT1Q9UGM3 2413 aaPredicted RBP1.01□□□□□ -2.25
HMGB3P30-201ENST00000457863 CHD7Q9P2D1 2997 aa1.01□□□□□ -2.25
HMGB3P30-201ENST00000457863 CEP250Q9BV73 2442 aa1.01□□□□□ -2.25
HMGB3P30-201ENST00000457863 HTTP42858 3142 aa1.01□□□□□ -2.25
HMGB3P30-201ENST00000457863 HIVEP3Q5T1R4 2406 aa1□□□□□ -2.25
HMGB3P30-201ENST00000457863 TNRC18O15417 2968 aaPredicted RBP1□□□□□ -2.25
HMGB3P30-201ENST00000457863 FRAS1Q86XX4 4008 aa1□□□□□ -2.25
HMGB3P30-201ENST00000457863 SPTBN4Q9H254 2564 aa1□□□□□ -2.25
HMGB3P30-201ENST00000457863 ANKHD1Q8IWZ3 2542 aaKnown RBP0.99□□□□□ -2.25
HMGB3P30-201ENST00000457863 A0A096LPF7 62 aa0.99□□□□□ -2.25
HMGB3P30-201ENST00000457863 H3BNG1 76 aa0.99□□□□□ -2.25
HMGB3P30-201ENST00000457863 VPS13BQ7Z7G8 4022 aa0.99□□□□□ -2.25
HMGB3P30-201ENST00000457863 LYSTQ99698 3801 aa0.99□□□□□ -2.25
HMGB3P30-201ENST00000457863 OTOGQ6ZRI0 2925 aa0.99□□□□□ -2.25
HMGB3P30-201ENST00000457863 FAT2Q9NYQ8 4349 aa0.98□□□□□ -2.25
HMGB3P30-201ENST00000457863 RANBP2P49792 3224 aaKnown RBP0.98□□□□□ -2.25
HMGB3P30-201ENST00000457863 KRTAP19-3Q7Z4W3 81 aa0.98□□□□□ -2.25
HMGB3P30-201ENST00000457863 DEFB124Q8NES8 71 aa0.98□□□□□ -2.25
HMGB3P30-201ENST00000457863 ZZEF1O43149 2961 aa0.98□□□□□ -2.25
HMGB3P30-201ENST00000457863 SPTAN1Q13813 2472 aaKnown RBP0.97□□□□□ -2.25
HMGB3P30-201ENST00000457863 MAP1AP78559 2803 aaPredicted RBP0.97□□□□□ -2.25
HMGB3P30-201ENST00000457863 FRYQ5TBA9 3013 aa0.97□□□□□ -2.25
HMGB3P30-201ENST00000457863 ZNF469Q96JG9 3925 aaPredicted RBP0.96□□□□□ -2.25
HMGB3P30-201ENST00000457863 FRYLO94915 3013 aa0.96□□□□□ -2.26
HMGB3P30-201ENST00000457863 TENM2Q9NT68 2774 aa0.96□□□□□ -2.26
HMGB3P30-201ENST00000457863 C9orf92A6NGG3 77 aa0.96□□□□□ -2.26
HMGB3P30-201ENST00000457863 XIRP2A4UGR9 3374 aa0.96□□□□□ -2.26
HMGB3P30-201ENST00000457863 DNAH11Q96DT5 4516 aa0.96□□□□□ -2.26
HMGB3P30-201ENST00000457863 APC2O95996 2303 aa0.95□□□□□ -2.26
HMGB3P30-201ENST00000457863 RIF1Q5UIP0 2472 aaKnown RBP0.95□□□□□ -2.26
HMGB3P30-201ENST00000457863 TACC2O95359 2948 aa0.95□□□□□ -2.26
HMGB3P30-201ENST00000457863 PRM1P04553 51 aa0.95□□□□□ -2.26
HMGB3P30-201ENST00000457863 HTN3P15516 51 aa0.95□□□□□ -2.26
HMGB3P30-201ENST00000457863 LINC01556Q5JQF7 62 aa0.95□□□□□ -2.26
HMGB3P30-201ENST00000457863 ANKRD11Q6UB99 2663 aaPredicted RBP0.95□□□□□ -2.26
HMGB3P30-201ENST00000457863 PTPN13Q12923 2485 aa0.95□□□□□ -2.26
HMGB3P30-201ENST00000457863 C5orf42Q9H799 3197 aa0.95□□□□□ -2.26
HMGB3P30-201ENST00000457863 TRIOO75962 3097 aa0.95□□□□□ -2.26
HMGB3P30-201ENST00000457863 KMT2AQ03164 3969 aa0.94□□□□□ -2.26
HMGB3P30-201ENST00000457863 KALRNO60229 2985 aa0.94□□□□□ -2.26
HMGB3P30-201ENST00000457863 UTRNP46939 3433 aa0.94□□□□□ -2.26
HMGB3P30-201ENST00000457863 TENM1Q9UKZ4 2725 aa0.94□□□□□ -2.26
HMGB3P30-201ENST00000457863 DEFB4AO15263 64 aa0.94□□□□□ -2.26
HMGB3P30-201ENST00000457863 MGAQ8IWI9 3026 aa0.94□□□□□ -2.26
HMGB3P30-201ENST00000457863 TLN1Q9Y490 2541 aaKnown RBP0.94□□□□□ -2.26
HMGB3P30-201ENST00000457863 SETXQ7Z333 2677 aaKnown RBP0.94□□□□□ -2.26
HMGB3P30-201ENST00000457863 PRUNE2Q8WUY3 3088 aa0.94□□□□□ -2.26
HMGB3P30-201ENST00000457863 CFAP54Q96N23 3096 aa0.94□□□□□ -2.26
HMGB3P30-201ENST00000457863 ACANP16112 2415 aa0.94□□□□□ -2.26
HMGB3P30-201ENST00000457863 EPG5Q9HCE0 2579 aa0.94□□□□□ -2.26
HMGB3P30-201ENST00000457863 ITPR1Q14643 2758 aa0.93□□□□□ -2.26
HMGB3P30-201ENST00000457863 HRNRQ86YZ3 2850 aaPredicted RBP0.93□□□□□ -2.26
HMGB3P30-201ENST00000457863 NOTCH1P46531 2555 aa0.93□□□□□ -2.26
HMGB3P30-201ENST00000457863 UNC80Q8N2C7 3258 aa0.93□□□□□ -2.26
HMGB3P30-201ENST00000457863 LAMA2P24043 3122 aaKnown RBP0.93□□□□□ -2.26
HMGB3P30-201ENST00000457863 GCN1Q92616 2671 aaKnown RBP0.93□□□□□ -2.26
HMGB3P30-201ENST00000457863 USP24Q9UPU5 2620 aa0.93□□□□□ -2.26
HMGB3P30-201ENST00000457863 FREM2Q5SZK8 3169 aa0.93□□□□□ -2.26
HMGB3P30-201ENST00000457863 SZT2Q5T011 3432 aa0.93□□□□□ -2.26
HMGB3P30-201ENST00000457863 VPS13DQ5THJ4 4388 aa0.93□□□□□ -2.26
HMGB3P30-201ENST00000457863 MYO9AB2RTY4 2548 aa0.92□□□□□ -2.26
HMGB3P30-201ENST00000457863 ZFYVE26Q68DK2 2539 aa0.92□□□□□ -2.26
HMGB3P30-201ENST00000457863 TLN2Q9Y4G6 2542 aa0.92□□□□□ -2.26
HMGB3P30-201ENST00000457863 COL6A3P12111 3177 aa0.92□□□□□ -2.26
HMGB3P30-201ENST00000457863 VPS13AQ96RL7 3174 aa0.92□□□□□ -2.26
HMGB3P30-201ENST00000457863 UTP20O75691 2785 aaKnown RBP0.92□□□□□ -2.26
HMGB3P30-201ENST00000457863 LAMA1P25391 3075 aa0.92□□□□□ -2.26
HMGB3P30-201ENST00000457863 LAMA3Q16787 3333 aa0.92□□□□□ -2.26
HMGB3P30-201ENST00000457863 PDZD2O15018 2839 aa0.92□□□□□ -2.26
HMGB3P30-201ENST00000457863 CEP295Q9C0D2 2601 aa0.91□□□□□ -2.26
HMGB3P30-201ENST00000457863 CFAP47Q6ZTR5 3102 aa0.91□□□□□ -2.26
HMGB3P30-201ENST00000457863 NF1P21359 2839 aa0.91□□□□□ -2.26
HMGB3P30-201ENST00000457863 DCHS2Q6V1P9 2916 aa0.91□□□□□ -2.26
HMGB3P30-201ENST00000457863 SPG11Q96JI7 2443 aa0.9□□□□□ -2.26
HMGB3P30-201ENST00000457863 MKI67P46013 3256 aaKnown RBP0.9□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms