RNA–Protein interactions for RNA: ENST00000449193.6

SKIDA1-202, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS P2 TSL 3 BASIC

Gene SKIDA1, Length 6,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-202ENST00000449193 TACC2O95359 2948 aa9.33□□□□□ -0.92
SKIDA1-202ENST00000449193 FLNCQ14315 2725 aa9.3□□□□□ -0.92
SKIDA1-202ENST00000449193 PRO2289Q9P1D8 64 aa9.29□□□□□ -0.92
SKIDA1-202ENST00000449193 REV3LO60673 3130 aa9.27□□□□□ -0.92
SKIDA1-202ENST00000449193 VPS13AQ96RL7 3174 aa9.24□□□□□ -0.93
SKIDA1-202ENST00000449193 CRYBG3Q68DQ2 2970 aa9.23□□□□□ -0.93
SKIDA1-202ENST00000449193 BRCA2P51587 3418 aa9.22□□□□□ -0.93
SKIDA1-202ENST00000449193 KRTAP13-3Q3SY46 172 aa9.21□□□□□ -0.94
SKIDA1-202ENST00000449193 NIPBLQ6KC79 2804 aaeCLIP9.2□□□□□ -0.94
SKIDA1-202ENST00000449193 ATMQ13315 3056 aa9.2□□□□□ -0.94
SKIDA1-202ENST00000449193 KALRNO60229 2985 aa9.19□□□□□ -0.94
SKIDA1-202ENST00000449193 COL12A1Q99715 3063 aa9.18□□□□□ -0.94
SKIDA1-202ENST00000449193 LRBAP50851 2863 aa9.18□□□□□ -0.94
SKIDA1-202ENST00000449193 DMXL2Q8TDJ6 3036 aa9.15□□□□□ -0.94
SKIDA1-202ENST00000449193 UNC80Q8N2C7 3258 aa9.14□□□□□ -0.95
SKIDA1-202ENST00000449193 CELSR3Q9NYQ7 3312 aa9.12□□□□□ -0.95
SKIDA1-202ENST00000449193 H0YAA0 97 aa9.11□□□□□ -0.95
SKIDA1-202ENST00000449193 FREM2Q5SZK8 3169 aa9.1□□□□□ -0.95
SKIDA1-202ENST00000449193 ASH1LQ9NR48 2969 aaKnown RBP9.08□□□□□ -0.96
SKIDA1-202ENST00000449193 LAMA1P25391 3075 aa9.06□□□□□ -0.96
SKIDA1-202ENST00000449193 FRYLO94915 3013 aa9.05□□□□□ -0.96
SKIDA1-202ENST00000449193 P0C880 135 aa9.03□□□□□ -0.96
SKIDA1-202ENST00000449193 CELSR2Q9HCU4 2923 aa9.02□□□□□ -0.97
SKIDA1-202ENST00000449193 CDH23Q9H251 3354 aa8.94□□□□□ -0.98
SKIDA1-202ENST00000449193 DNAH14Q0VDD8 3507 aa8.94□□□□□ -0.98
SKIDA1-202ENST00000449193 DCHS2Q6V1P9 2916 aa8.93□□□□□ -0.98
SKIDA1-202ENST00000449193 SZT2Q5T011 3432 aa8.93□□□□□ -0.98
SKIDA1-202ENST00000449193 ADGRG4Q8IZF6 3080 aa8.92□□□□□ -0.98
SKIDA1-202ENST00000449193 TENM1Q9UKZ4 2725 aa8.9□□□□□ -0.98
SKIDA1-202ENST00000449193 EYSQ5T1H1 3165 aa8.9□□□□□ -0.98
SKIDA1-202ENST00000449193 ZZEF1O43149 2961 aa8.89□□□□□ -0.99
SKIDA1-202ENST00000449193 TENM3Q9P273 2699 aa8.89□□□□□ -0.99
SKIDA1-202ENST00000449193 TENM2Q9NT68 2774 aa8.84□□□□□ -0.99
SKIDA1-202ENST00000449193 NBEAQ8NFP9 2946 aa8.82□□□□□ -1
SKIDA1-202ENST00000449193 BOD1L1Q8NFC6 3051 aa8.82□□□□□ -1
SKIDA1-202ENST00000449193 COL6A3P12111 3177 aa8.77□□□□□ -1.01
SKIDA1-202ENST00000449193 NF1P21359 2839 aa8.73□□□□□ -1.01
SKIDA1-202ENST00000449193 CFAP47Q6ZTR5 3102 aa8.72□□□□□ -1.01
SKIDA1-202ENST00000449193 ZANQ9Y493 2812 aa8.71□□□□□ -1.01
SKIDA1-202ENST00000449193 VCANP13611 3396 aa8.67□□□□□ -1.02
SKIDA1-202ENST00000449193 KRTAP12-2P59991 146 aa8.62□□□□□ -1.03
SKIDA1-202ENST00000449193 KRTAP13-4Q3LI77 160 aa8.6□□□□□ -1.03
SKIDA1-202ENST00000449193 TGP01266 2768 aa8.6□□□□□ -1.03
SKIDA1-202ENST00000449193 HRNRQ86YZ3 2850 aaPredicted RBP8.56□□□□□ -1.04
SKIDA1-202ENST00000449193 SPEGQ15772 3267 aa8.56□□□□□ -1.04
SKIDA1-202ENST00000449193 TNRC18O15417 2968 aaPredicted RBP8.53□□□□□ -1.04
SKIDA1-202ENST00000449193 CELSR1Q9NYQ6 3014 aa8.5□□□□□ -1.05
SKIDA1-202ENST00000449193 FBN2P35556 2912 aa8.5□□□□□ -1.05
SKIDA1-202ENST00000449193 USP34Q70CQ2 3546 aa8.48□□□□□ -1.05
SKIDA1-202ENST00000449193 KRTAP12-1P59990 96 aa8.47□□□□□ -1.05
SKIDA1-202ENST00000449193 PKD1L1Q8TDX9 2849 aa8.44□□□□□ -1.06
SKIDA1-202ENST00000449193 MXRA5Q9NR99 2828 aa8.44□□□□□ -1.06
SKIDA1-202ENST00000449193 MYO15AQ9UKN7 3530 aa8.42□□□□□ -1.06
SKIDA1-202ENST00000449193 DMXL1Q9Y485 3027 aa8.41□□□□□ -1.06
SKIDA1-202ENST00000449193 PDZD2O15018 2839 aa8.37□□□□□ -1.07
SKIDA1-202ENST00000449193 KRTAP3-1Q9BYR8 98 aa8.36□□□□□ -1.07
SKIDA1-202ENST00000449193 KRTAP15-1Q3LI76 137 aa8.35□□□□□ -1.07
SKIDA1-202ENST00000449193 SPTBN5Q9NRC6 3674 aaKnown RBP8.33□□□□□ -1.08
SKIDA1-202ENST00000449193 VWFP04275 2813 aa8.3□□□□□ -1.08
SKIDA1-202ENST00000449193 ASPMQ8IZT6 3477 aa8.26□□□□□ -1.09
SKIDA1-202ENST00000449193 WDFY3Q8IZQ1 3526 aa8.17□□□□□ -1.1
SKIDA1-202ENST00000449193 MT1HL1P0DM35 61 aa8.15□□□□□ -1.11
SKIDA1-202ENST00000449193 KRTAP10-6P60371 365 aaPredicted RBP8.14□□□□□ -1.11
SKIDA1-202ENST00000449193 LOC400499M0QZD8 3231 aa8.08□□□□□ -1.12
SKIDA1-202ENST00000449193 DCHS1Q96JQ0 3298 aa8.04□□□□□ -1.12
SKIDA1-202ENST00000449193 KRTAP10-12P60413 245 aa7.99□□□□□ -1.13
SKIDA1-202ENST00000449193 SRRM2Q9UQ35 2752 aaKnown RBP7.91□□□□□ -1.14
SKIDA1-202ENST00000449193 FBN3Q75N90 2809 aa7.9□□□□□ -1.14
SKIDA1-202ENST00000449193 CRCT1Q9UGL9 99 aa7.89□□□□□ -1.15
SKIDA1-202ENST00000449193 KRTAP4-5Q9BYR2 181 aa7.86□□□□□ -1.15
SKIDA1-202ENST00000449193 OTOGQ6ZRI0 2925 aa7.86□□□□□ -1.15
SKIDA1-202ENST00000449193 NBPF19A0A087WUL8 3843 aa7.86□□□□□ -1.15
SKIDA1-202ENST00000449193 LAMA5O15230 3695 aa7.83□□□□□ -1.16
SKIDA1-202ENST00000449193 FBN1P35555 2871 aaKnown RBP7.82□□□□□ -1.16
SKIDA1-202ENST00000449193 KRTAP3-3Q9BYR6 98 aa7.82□□□□□ -1.16
SKIDA1-202ENST00000449193 KRTAP3-2Q9BYR7 98 aa7.81□□□□□ -1.16
SKIDA1-202ENST00000449193 RELNP78509 3460 aa7.81□□□□□ -1.16
SKIDA1-202ENST00000449193 KRTAP10-4P60372 401 aaPredicted RBP7.8□□□□□ -1.16
SKIDA1-202ENST00000449193 MEGF8Q7Z7M0 2845 aa7.76□□□□□ -1.17
SKIDA1-202ENST00000449193 CSMD1Q96PZ7 3565 aa7.76□□□□□ -1.17
SKIDA1-202ENST00000449193 ZFHX4Q86UP3 3567 aa7.74□□□□□ -1.17
SKIDA1-202ENST00000449193 INE1O15225 51 aa7.74□□□□□ -1.17
SKIDA1-202ENST00000449193 KRTAP12-3P60328 96 aa7.72□□□□□ -1.17
SKIDA1-202ENST00000449193 ANK3Q12955 4377 aaKnown RBP7.71□□□□□ -1.17
SKIDA1-202ENST00000449193 COL7A1Q02388 2944 aa7.65□□□□□ -1.18
SKIDA1-202ENST00000449193 ZFHX3Q15911 3703 aa7.64□□□□□ -1.19
SKIDA1-202ENST00000449193 KRTAP23-1A1A580 65 aa7.61□□□□□ -1.19
SKIDA1-202ENST00000449193 LCE3AQ5TA76 89 aa7.56□□□□□ -1.2
SKIDA1-202ENST00000449193 KRTAP8-1Q8IUC2 63 aa7.49□□□□□ -1.21
SKIDA1-202ENST00000449193 CUBNO60494 3623 aa7.48□□□□□ -1.21
SKIDA1-202ENST00000449193 ALMS1Q8TCU4 4167 aa7.44□□□□□ -1.22
SKIDA1-202ENST00000449193 SMG1Q96Q15 3661 aaKnown RBP7.43□□□□□ -1.22
SKIDA1-202ENST00000449193 SPENQ96T58 3664 aaKnown RBP7.42□□□□□ -1.22
SKIDA1-202ENST00000449193 LORP23490 312 aaPredicted RBP7.4□□□□□ -1.23
SKIDA1-202ENST00000449193 HUWE1Q7Z6Z7 4374 aaKnown RBP7.38□□□□□ -1.23
SKIDA1-202ENST00000449193 SVEP1Q4LDE5 3571 aa7.34□□□□□ -1.23
SKIDA1-202ENST00000449193 TRRAPQ9Y4A5 3859 aa7.3□□□□□ -1.24
SKIDA1-202ENST00000449193 DMDP11532 3685 aa7.29□□□□□ -1.24
SKIDA1-202ENST00000449193 KRTAP10-5P60370 271 aa7.28□□□□□ -1.24
SKIDA1-202ENST00000449193 CSMD2Q7Z408 3487 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms