RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 A0A087WTM6 91 aa9.43□□□□□ -0.9
CHRD-205ENST00000448472 ZNF861PO60384 105 aa9.43□□□□□ -0.9
CHRD-205ENST00000448472 HUWE1Q7Z6Z7 4374 aaKnown RBP9.42□□□□□ -0.9
CHRD-205ENST00000448472 Q5W150 140 aa9.42□□□□□ -0.9
CHRD-205ENST00000448472 NUPR2A6NF83 97 aa9.42□□□□□ -0.9
CHRD-205ENST00000448472 IGLV5-52A0A0A0MRZ9 124 aa9.42□□□□□ -0.9
CHRD-205ENST00000448472 RBM12B-AS1Q9P1G2 102 aa9.4□□□□□ -0.9
CHRD-205ENST00000448472 ACYP2P14621 99 aa9.38□□□□□ -0.91
CHRD-205ENST00000448472 Q6ZRN7 208 aaPredicted RBP9.38□□□□□ -0.91
CHRD-205ENST00000448472 LINC00483Q53H64 154 aa9.36□□□□□ -0.91
CHRD-205ENST00000448472 ASB16-AS1Q495Z4 193 aa9.35□□□□□ -0.91
CHRD-205ENST00000448472 DNAH9Q9NYC9 4486 aa9.35□□□□□ -0.91
CHRD-205ENST00000448472 A6NN06 94 aa9.33□□□□□ -0.92
CHRD-205ENST00000448472 LINC00313P59037 77 aa9.32□□□□□ -0.92
CHRD-205ENST00000448472 IGKV2D-30A0A075B6S6 120 aa9.32□□□□□ -0.92
CHRD-205ENST00000448472 A0A1B0GU69 56 aa9.32□□□□□ -0.92
CHRD-205ENST00000448472 IGKV2-30P06310 120 aa9.32□□□□□ -0.92
CHRD-205ENST00000448472 C7orf65Q6ZTY9 151 aa9.32□□□□□ -0.92
CHRD-205ENST00000448472 DNAH1Q9P2D7 4330 aa9.3□□□□□ -0.92
CHRD-205ENST00000448472 IGLV7-43P04211 117 aa9.29□□□□□ -0.92
CHRD-205ENST00000448472 LY6G6CO95867 125 aa9.28□□□□□ -0.92
CHRD-205ENST00000448472 CMYA5Q8N3K9 4069 aa9.27□□□□□ -0.93
CHRD-205ENST00000448472 FBN3Q75N90 2809 aa9.27□□□□□ -0.93
CHRD-205ENST00000448472 SPINK1P00995 79 aa9.26□□□□□ -0.93
CHRD-205ENST00000448472 PRAC1Q96KF2 57 aa9.26□□□□□ -0.93
CHRD-205ENST00000448472 C1orf134Q5TEV5 83 aa9.25□□□□□ -0.93
CHRD-205ENST00000448472 PLAC8Q9NZF1 115 aa9.25□□□□□ -0.93
CHRD-205ENST00000448472 FAM229AH3BQW9 127 aa9.23□□□□□ -0.93
CHRD-205ENST00000448472 C8orf87E5RJ46 101 aa9.22□□□□□ -0.93
CHRD-205ENST00000448472 MEGF8Q7Z7M0 2845 aa9.2□□□□□ -0.94
CHRD-205ENST00000448472 SSBP3-AS1Q7Z2R9 100 aa9.19□□□□□ -0.94
CHRD-205ENST00000448472 DNAH7Q8WXX0 4024 aa9.18□□□□□ -0.94
CHRD-205ENST00000448472 DNHD1Q96M86 4753 aa9.18□□□□□ -0.94
CHRD-205ENST00000448472 C4orf48Q5BLP8 95 aa9.17□□□□□ -0.94
CHRD-205ENST00000448472 ADM2Q7Z4H4 148 aa9.16□□□□□ -0.94
CHRD-205ENST00000448472 PLECQ15149 4684 aaKnown RBP9.15□□□□□ -0.94
CHRD-205ENST00000448472 DMAC1Q96GE9 116 aa9.15□□□□□ -0.95
CHRD-205ENST00000448472 DNAH3Q8TD57 4116 aa9.14□□□□□ -0.95
CHRD-205ENST00000448472 MIR22HGQ0VDD5 57 aa9.14□□□□□ -0.95
CHRD-205ENST00000448472 UQCR11O14957 56 aa9.11□□□□□ -0.95
CHRD-205ENST00000448472 KRTAP13-3Q3SY46 172 aa9.1□□□□□ -0.95
CHRD-205ENST00000448472 FRAS1Q86XX4 4008 aa9.08□□□□□ -0.96
CHRD-205ENST00000448472 Q8N1X5 172 aa9.08□□□□□ -0.96
CHRD-205ENST00000448472 KRTAP10-2P60368 255 aa9.07□□□□□ -0.96
CHRD-205ENST00000448472 KRTAP13-2Q52LG2 175 aa9.04□□□□□ -0.96
CHRD-205ENST00000448472 PLA2G1BP04054 148 aaKnown RBP9.01□□□□□ -0.97
CHRD-205ENST00000448472 DNAH8Q96JB1 4490 aa9.01□□□□□ -0.97
CHRD-205ENST00000448472 TYMSOSQ8TAI1 123 aa9□□□□□ -0.97
CHRD-205ENST00000448472 SPATA8Q6RVD6 105 aa8.97□□□□□ -0.97
CHRD-205ENST00000448472 PRKDCP78527 4128 aaKnown RBP8.96□□□□□ -0.97
CHRD-205ENST00000448472 STARD9Q9P2P6 4700 aa8.94□□□□□ -0.98
CHRD-205ENST00000448472 KRTAP10-1P60331 282 aa8.93□□□□□ -0.98
CHRD-205ENST00000448472 KMT2AQ03164 3969 aa8.92□□□□□ -0.98
CHRD-205ENST00000448472 LINC01554Q52M75 96 aa8.91□□□□□ -0.98
CHRD-205ENST00000448472 CSAG1Q6PB30 78 aa8.91□□□□□ -0.98
CHRD-205ENST00000448472 FLG2Q5D862 2391 aaPredicted RBP8.9□□□□□ -0.98
CHRD-205ENST00000448472 C9orf92A6NGG3 77 aa8.9□□□□□ -0.99
CHRD-205ENST00000448472 KRTAP16-1A8MUX0 517 aa8.88□□□□□ -0.99
CHRD-205ENST00000448472 DNAH17Q9UFH2 4485 aa8.87□□□□□ -0.99
CHRD-205ENST00000448472 HECTD4Q9Y4D8 3996 aa8.84□□□□□ -0.99
CHRD-205ENST00000448472 SMR3BP02814 79 aaPredicted RBP8.81□□□□□ -1
CHRD-205ENST00000448472 VPS13DQ5THJ4 4388 aa8.81□□□□□ -1
CHRD-205ENST00000448472 KRTAP1-4P0C5Y4 121 aa8.8□□□□□ -1
CHRD-205ENST00000448472 LINC00304Q8N9R0 145 aa8.8□□□□□ -1
CHRD-205ENST00000448472 DMBT1Q9UGM3 2413 aaPredicted RBP8.79□□□□□ -1
CHRD-205ENST00000448472 DNAH11Q96DT5 4516 aa8.79□□□□□ -1
CHRD-205ENST00000448472 DNAH2Q9P225 4427 aa8.78□□□□□ -1
CHRD-205ENST00000448472 DNAH6Q9C0G6 4158 aa8.74□□□□□ -1.01
CHRD-205ENST00000448472 DYNC2H1Q8NCM8 4307 aaKnown RBP8.73□□□□□ -1.01
CHRD-205ENST00000448472 A0A1B0GU33 70 aa8.7□□□□□ -1.02
CHRD-205ENST00000448472 CRIPTQ9P021 101 aa8.7□□□□□ -1.02
CHRD-205ENST00000448472 ALMS1Q8TCU4 4167 aa8.69□□□□□ -1.02
CHRD-205ENST00000448472 LRP1BQ9NZR2 4599 aa8.68□□□□□ -1.02
CHRD-205ENST00000448472 Q6ZSA8 131 aa8.68□□□□□ -1.02
CHRD-205ENST00000448472 H0YAA0 97 aa8.64□□□□□ -1.03
CHRD-205ENST00000448472 K7ERS5 55 aa8.64□□□□□ -1.03
CHRD-205ENST00000448472 H3BS24 57 aa8.57□□□□□ -1.04
CHRD-205ENST00000448472 H1FX-AS1Q4G0G2 97 aa8.56□□□□□ -1.04
CHRD-205ENST00000448472 DNAH5Q8TE73 4624 aa8.55□□□□□ -1.04
CHRD-205ENST00000448472 A8MUU9 505 aa8.52□□□□□ -1.05
CHRD-205ENST00000448472 A0A0D9SG42 100 aa8.52□□□□□ -1.05
CHRD-205ENST00000448472 VPS13BQ7Z7G8 4022 aa8.51□□□□□ -1.05
CHRD-205ENST00000448472 KRTAP3-1Q9BYR8 98 aa8.49□□□□□ -1.05
CHRD-205ENST00000448472 KRTAP25-1Q3LHN0 102 aa8.48□□□□□ -1.05
CHRD-205ENST00000448472 HYDINQ4G0P3 5121 aa8.45□□□□□ -1.06
CHRD-205ENST00000448472 C20orf166-AS1Q96NR2 134 aa8.44□□□□□ -1.06
CHRD-205ENST00000448472 COX6B2Q6YFQ2 88 aa8.43□□□□□ -1.06
CHRD-205ENST00000448472 RPS29P62273 56 aaKnown RBP8.4□□□□□ -1.06
CHRD-205ENST00000448472 ROMO1P60602 79 aa8.32□□□□□ -1.08
CHRD-205ENST00000448472 FAT1Q14517 4588 aa8.32□□□□□ -1.08
CHRD-205ENST00000448472 FAT2Q9NYQ8 4349 aa8.31□□□□□ -1.08
CHRD-205ENST00000448472 SPINT4Q6UDR6 99 aa8.3□□□□□ -1.08
CHRD-205ENST00000448472 RPL37P61927 97 aaKnown RBP8.29□□□□□ -1.08
CHRD-205ENST00000448472 PKHD1P08F94 4074 aa8.27□□□□□ -1.09
CHRD-205ENST00000448472 PKD1P98161 4303 aa8.25□□□□□ -1.09
CHRD-205ENST00000448472 KMT2CQ8NEZ4 4911 aaKnown RBP8.24□□□□□ -1.09
CHRD-205ENST00000448472 S4R3F8 94 aa8.2□□□□□ -1.1
CHRD-205ENST00000448472 C10orf95Q9H7T3 257 aa8.18□□□□□ -1.1
CHRD-205ENST00000448472 KRTAP21-3Q3LHN1 58 aa8.17□□□□□ -1.1
CHRD-205ENST00000448472 KRTAP13-4Q3LI77 160 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms