RNA–Protein interactions for RNA: ENST00000448087.5

GTF3C3-205, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 1,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-205ENST00000448087 CENPFP49454 3210 aa1.17□□□□□ -2.22
GTF3C3-205ENST00000448087 SPEGQ15772 3267 aa1.17□□□□□ -2.22
GTF3C3-205ENST00000448087 PKD1L2Q7Z442 2459 aa1.16□□□□□ -2.22
GTF3C3-205ENST00000448087 Q5VSD8 79 aa1.16□□□□□ -2.22
GTF3C3-205ENST00000448087 RELNP78509 3460 aa1.16□□□□□ -2.22
GTF3C3-205ENST00000448087 A0A0D9SG42 100 aa1.15□□□□□ -2.22
GTF3C3-205ENST00000448087 UTRNP46939 3433 aa1.15□□□□□ -2.23
GTF3C3-205ENST00000448087 BOD1L1Q8NFC6 3051 aa1.14□□□□□ -2.23
GTF3C3-205ENST00000448087 CELSR3Q9NYQ7 3312 aa1.14□□□□□ -2.23
GTF3C3-205ENST00000448087 SETD2Q9BYW2 2564 aaPredicted RBP1.14□□□□□ -2.23
GTF3C3-205ENST00000448087 DMBT1Q9UGM3 2413 aaPredicted RBP1.14□□□□□ -2.23
GTF3C3-205ENST00000448087 AKAP13Q12802 2813 aa1.14□□□□□ -2.23
GTF3C3-205ENST00000448087 CELSR1Q9NYQ6 3014 aa1.14□□□□□ -2.23
GTF3C3-205ENST00000448087 HECTD1Q9ULT8 2610 aa1.13□□□□□ -2.23
GTF3C3-205ENST00000448087 CFAP47Q6ZTR5 3102 aa1.13□□□□□ -2.23
GTF3C3-205ENST00000448087 PCNTO95613 3336 aa1.13□□□□□ -2.23
GTF3C3-205ENST00000448087 EP300Q09472 2414 aaPredicted RBP1.13□□□□□ -2.23
GTF3C3-205ENST00000448087 RIF1Q5UIP0 2472 aaKnown RBP1.13□□□□□ -2.23
GTF3C3-205ENST00000448087 WDFY4Q6ZS81 3184 aa1.13□□□□□ -2.23
GTF3C3-205ENST00000448087 ATMQ13315 3056 aa1.13□□□□□ -2.23
GTF3C3-205ENST00000448087 CCDC168Q8NDH2 2452 aa1.13□□□□□ -2.23
GTF3C3-205ENST00000448087 TTC28Q96AY4 2481 aa1.13□□□□□ -2.23
GTF3C3-205ENST00000448087 APC2O95996 2303 aa1.13□□□□□ -2.23
GTF3C3-205ENST00000448087 ITPR1Q14643 2758 aa1.12□□□□□ -2.23
GTF3C3-205ENST00000448087 DEFB136Q30KP8 78 aa1.12□□□□□ -2.23
GTF3C3-205ENST00000448087 H3BUX3 64 aa1.12□□□□□ -2.23
GTF3C3-205ENST00000448087 NF1P21359 2839 aa1.11□□□□□ -2.23
GTF3C3-205ENST00000448087 ZNF292O60281 2723 aa1.11□□□□□ -2.23
GTF3C3-205ENST00000448087 COL12A1Q99715 3063 aa1.11□□□□□ -2.23
GTF3C3-205ENST00000448087 ZZEF1O43149 2961 aa1.11□□□□□ -2.23
GTF3C3-205ENST00000448087 NOP10Q9NPE3 64 aaKnown RBP1.11□□□□□ -2.23
GTF3C3-205ENST00000448087 NBASA2RRP1 2371 aa1.11□□□□□ -2.23
GTF3C3-205ENST00000448087 MAP1BP46821 2468 aaKnown RBP1.1□□□□□ -2.23
GTF3C3-205ENST00000448087 FRYQ5TBA9 3013 aa1.1□□□□□ -2.23
GTF3C3-205ENST00000448087 CHD9Q3L8U1 2897 aa1.09□□□□□ -2.23
GTF3C3-205ENST00000448087 ZFHX4Q86UP3 3567 aa1.09□□□□□ -2.24
GTF3C3-205ENST00000448087 COL6A5A8TX70 2615 aa1.09□□□□□ -2.24
GTF3C3-205ENST00000448087 DCHS1Q96JQ0 3298 aa1.09□□□□□ -2.24
GTF3C3-205ENST00000448087 MEGF8Q7Z7M0 2845 aa1.09□□□□□ -2.24
GTF3C3-205ENST00000448087 MUC3AQ02505 3323 aa1.09□□□□□ -2.24
GTF3C3-205ENST00000448087 DNAH12Q6ZR08 3092 aa1.08□□□□□ -2.24
GTF3C3-205ENST00000448087 BDP1A6H8Y1 2624 aa1.08□□□□□ -2.24
GTF3C3-205ENST00000448087 MAP1AP78559 2803 aaPredicted RBP1.08□□□□□ -2.24
GTF3C3-205ENST00000448087 LRBAP50851 2863 aa1.08□□□□□ -2.24
GTF3C3-205ENST00000448087 DMXL2Q8TDJ6 3036 aa1.08□□□□□ -2.24
GTF3C3-205ENST00000448087 DMXL1Q9Y485 3027 aa1.08□□□□□ -2.24
GTF3C3-205ENST00000448087 XIRP2A4UGR9 3374 aa1.08□□□□□ -2.24
GTF3C3-205ENST00000448087 DCHS2Q6V1P9 2916 aa1.08□□□□□ -2.24
GTF3C3-205ENST00000448087 CD52P31358 61 aa1.08□□□□□ -2.24
GTF3C3-205ENST00000448087 A0A096LNI7 61 aa1.07□□□□□ -2.24
GTF3C3-205ENST00000448087 FREM2Q5SZK8 3169 aa1.07□□□□□ -2.24
GTF3C3-205ENST00000448087 EPG5Q9HCE0 2579 aa1.06□□□□□ -2.24
GTF3C3-205ENST00000448087 HIVEP3Q5T1R4 2406 aa1.06□□□□□ -2.24
GTF3C3-205ENST00000448087 FAM186AA6NE01 2351 aa1.06□□□□□ -2.24
GTF3C3-205ENST00000448087 ATRQ13535 2644 aa1.06□□□□□ -2.24
GTF3C3-205ENST00000448087 LAMA2P24043 3122 aaKnown RBP1.06□□□□□ -2.24
GTF3C3-205ENST00000448087 USP9YO00507 2555 aaPredicted RBP1.06□□□□□ -2.24
GTF3C3-205ENST00000448087 POLQO75417 2590 aa1.06□□□□□ -2.24
GTF3C3-205ENST00000448087 KALRNO60229 2985 aa1.05□□□□□ -2.24
GTF3C3-205ENST00000448087 M0QZ58 72 aa1.05□□□□□ -2.24
GTF3C3-205ENST00000448087 ASPMQ8IZT6 3477 aa1.05□□□□□ -2.24
GTF3C3-205ENST00000448087 PDZD2O15018 2839 aa1.05□□□□□ -2.24
GTF3C3-205ENST00000448087 NBPF19A0A087WUL8 3843 aa1.04□□□□□ -2.24
GTF3C3-205ENST00000448087 SPINK6Q6UWN8 80 aa1.04□□□□□ -2.24
GTF3C3-205ENST00000448087 SPG11Q96JI7 2443 aa1.04□□□□□ -2.24
GTF3C3-205ENST00000448087 A0A096LPF7 62 aa1.03□□□□□ -2.24
GTF3C3-205ENST00000448087 LAMA3Q16787 3333 aa1.03□□□□□ -2.24
GTF3C3-205ENST00000448087 SONP18583 2426 aaKnown RBP1.03□□□□□ -2.24
GTF3C3-205ENST00000448087 DMDP11532 3685 aa1.03□□□□□ -2.24
GTF3C3-205ENST00000448087 EP400Q96L91 3159 aa1.03□□□□□ -2.24
GTF3C3-205ENST00000448087 PIEZO1Q92508 2521 aa1.03□□□□□ -2.24
GTF3C3-205ENST00000448087 USP34Q70CQ2 3546 aa1.03□□□□□ -2.24
GTF3C3-205ENST00000448087 USP24Q9UPU5 2620 aa1.03□□□□□ -2.25
GTF3C3-205ENST00000448087 LOC400499M0QZD8 3231 aa1.03□□□□□ -2.25
GTF3C3-205ENST00000448087 PTPN13Q12923 2485 aa1.02□□□□□ -2.25
GTF3C3-205ENST00000448087 LRRK2Q5S007 2527 aa1.02□□□□□ -2.25
GTF3C3-205ENST00000448087 SPTBN5Q9NRC6 3674 aaKnown RBP1.02□□□□□ -2.25
GTF3C3-205ENST00000448087 Q9Y3F1 56 aa1.01□□□□□ -2.25
GTF3C3-205ENST00000448087 UTP20O75691 2785 aaKnown RBP1.01□□□□□ -2.25
GTF3C3-205ENST00000448087 NCOR2Q9Y618 2525 aa1.01□□□□□ -2.25
GTF3C3-205ENST00000448087 LAMA1P25391 3075 aa1.01□□□□□ -2.25
GTF3C3-205ENST00000448087 ITPR3Q14573 2671 aa1.01□□□□□ -2.25
GTF3C3-205ENST00000448087 LAMA5O15230 3695 aa1.01□□□□□ -2.25
GTF3C3-205ENST00000448087 UNC80Q8N2C7 3258 aa1.01□□□□□ -2.25
GTF3C3-205ENST00000448087 ANKHD1Q8IWZ3 2542 aaKnown RBP1.01□□□□□ -2.25
GTF3C3-205ENST00000448087 APCP25054 2843 aa1.01□□□□□ -2.25
GTF3C3-205ENST00000448087 NIPBLQ6KC79 2804 aaeCLIP1.01□□□□□ -2.25
GTF3C3-205ENST00000448087 COL7A1Q02388 2944 aa1.01□□□□□ -2.25
GTF3C3-205ENST00000448087 DNAH11Q96DT5 4516 aa1□□□□□ -2.25
GTF3C3-205ENST00000448087 DEFB124Q8NES8 71 aa1□□□□□ -2.25
GTF3C3-205ENST00000448087 CSMD3Q7Z407 3707 aa1□□□□□ -2.25
GTF3C3-205ENST00000448087 VPS13DQ5THJ4 4388 aa1□□□□□ -2.25
GTF3C3-205ENST00000448087 FLNCQ14315 2725 aa0.99□□□□□ -2.25
GTF3C3-205ENST00000448087 DEFB133Q30KQ1 61 aa0.98□□□□□ -2.25
GTF3C3-205ENST00000448087 BRCA2P51587 3418 aa0.98□□□□□ -2.25
GTF3C3-205ENST00000448087 SPENQ96T58 3664 aaKnown RBP0.98□□□□□ -2.25
GTF3C3-205ENST00000448087 VCANP13611 3396 aa0.98□□□□□ -2.25
GTF3C3-205ENST00000448087 AKAP9Q99996 3911 aa0.98□□□□□ -2.25
GTF3C3-205ENST00000448087 MYCBP2O75592 4640 aa0.97□□□□□ -2.25
GTF3C3-205ENST00000448087 NBEAL2Q6ZNJ1 2754 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms