RNA–Protein interactions for RNA: ENST00000448087.5

GTF3C3-205, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 1,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-205ENST00000448087 AEBP2Q6ZN18 517 aaPredicted RBP23.45■■□□□ 1.34
GTF3C3-205ENST00000448087 CHIC1Q5VXU3 224 aa22.98■■□□□ 1.27
GTF3C3-205ENST00000448087 PHF23Q9BUL5 403 aaPredicted RBP20.24■□□□□ 0.83
GTF3C3-205ENST00000448087 SENP3Q9H4L4 574 aaPredicted RBP19.86■□□□□ 0.77
GTF3C3-205ENST00000448087 PLPPR3Q6T4P5 718 aa18.7■□□□□ 0.58
GTF3C3-205ENST00000448087 FOXD1Q16676 465 aa18.44■□□□□ 0.54
GTF3C3-205ENST00000448087 PPP6R1Q9UPN7 881 aa17.84■□□□□ 0.45
GTF3C3-205ENST00000448087 ADRA2BP18089 450 aa17.82■□□□□ 0.44
GTF3C3-205ENST00000448087 PIAS4Q8N2W9 510 aaPredicted RBP17.41■□□□□ 0.38
GTF3C3-205ENST00000448087 MSH5O43196 834 aa16.93■□□□□ 0.3
GTF3C3-205ENST00000448087 PPP4R3CPQ6ZMV5 832 aa16.5■□□□□ 0.23
GTF3C3-205ENST00000448087 POTEDQ86YR6 584 aa16.33■□□□□ 0.21
GTF3C3-205ENST00000448087 SCAF1Q9H7N4 1312 aaKnown RBP16.27■□□□□ 0.19
GTF3C3-205ENST00000448087 KCNA4P22459 653 aa16.25■□□□□ 0.19
GTF3C3-205ENST00000448087 MAPK8IP2Q13387 824 aaPredicted RBP16.14■□□□□ 0.17
GTF3C3-205ENST00000448087 NCBP3Q53F19 620 aaKnown RBP16.08■□□□□ 0.16
GTF3C3-205ENST00000448087 CNKSR2Q8WXI2 1034 aa16■□□□□ 0.15
GTF3C3-205ENST00000448087 DMRT2Q9Y5R5 561 aa15.87■□□□□ 0.13
GTF3C3-205ENST00000448087 NPM3O75607 178 aaKnown RBP15.86■□□□□ 0.13
GTF3C3-205ENST00000448087 RNF216Q9NWF9 866 aaPredicted RBP15.67■□□□□ 0.1
GTF3C3-205ENST00000448087 HOXD11P31277 338 aaPredicted RBP15.58■□□□□ 0.08
GTF3C3-205ENST00000448087 SLC4A1APQ9BWU0 796 aaKnown RBP15.48■□□□□ 0.07
GTF3C3-205ENST00000448087 DNAJC5BQ9UF47 199 aa15.37■□□□□ 0.05
GTF3C3-205ENST00000448087 DCAF8L1A6NGE4 600 aa15.19■□□□□ 0.02
GTF3C3-205ENST00000448087 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
GTF3C3-205ENST00000448087 ZBTB22O15209 634 aa14.97□□□□□ -0.01
GTF3C3-205ENST00000448087 SLC4A2P04920 1241 aa14.97□□□□□ -0.01
GTF3C3-205ENST00000448087 CSRNP3Q8WYN3 585 aa14.95□□□□□ -0.02
GTF3C3-205ENST00000448087 FOXD4L1Q9NU39 408 aa14.9□□□□□ -0.02
GTF3C3-205ENST00000448087 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.86□□□□□ -0.03
GTF3C3-205ENST00000448087 MYCNP04198 464 aaPredicted RBP14.65□□□□□ -0.06
GTF3C3-205ENST00000448087 U3KPZ7 1027 aaPredicted RBP14.63□□□□□ -0.07
GTF3C3-205ENST00000448087 RNF39Q9H2S5 420 aa14.54□□□□□ -0.08
GTF3C3-205ENST00000448087 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.45□□□□□ -0.1
GTF3C3-205ENST00000448087 HNRNPUL2Q1KMD3 747 aaKnown RBP14.45□□□□□ -0.1
GTF3C3-205ENST00000448087 SAMD1Q6SPF0 538 aaPredicted RBP14.41□□□□□ -0.1
GTF3C3-205ENST00000448087 ATXN8OSP0DMR3 200 aa14.36□□□□□ -0.11
GTF3C3-205ENST00000448087 C1QBPQ07021 282 aaKnown RBP14.35□□□□□ -0.11
GTF3C3-205ENST00000448087 ATF5Q9Y2D1 282 aaPredicted RBP14.28□□□□□ -0.12
GTF3C3-205ENST00000448087 APLP2Q06481 763 aa14.27□□□□□ -0.13
GTF3C3-205ENST00000448087 SPINK5Q9NQ38 1064 aaPredicted RBP14.21□□□□□ -0.14
GTF3C3-205ENST00000448087 CAPN15O75808 1086 aa14.13□□□□□ -0.15
GTF3C3-205ENST00000448087 TRHP20396 242 aaPredicted RBP14.09□□□□□ -0.15
GTF3C3-205ENST00000448087 CACNB1Q02641 598 aaPredicted RBP14.08□□□□□ -0.16
GTF3C3-205ENST00000448087 ZNF219Q9P2Y4 722 aaPredicted RBP14.07□□□□□ -0.16
GTF3C3-205ENST00000448087 POLA2Q14181 598 aa13.9□□□□□ -0.18
GTF3C3-205ENST00000448087 ABCB7O75027 752 aa13.89□□□□□ -0.19
GTF3C3-205ENST00000448087 DSG3P32926 999 aa13.87□□□□□ -0.19
GTF3C3-205ENST00000448087 MKRN4PQ13434 485 aaPredicted RBP13.66□□□□□ -0.22
GTF3C3-205ENST00000448087 FBLN2P98095 1184 aa13.64□□□□□ -0.23
GTF3C3-205ENST00000448087 ZBTB12Q9Y330 459 aaPredicted RBP13.64□□□□□ -0.23
GTF3C3-205ENST00000448087 FKBP8Q14318 412 aa13.5□□□□□ -0.25
GTF3C3-205ENST00000448087 OSCARQ8IYS5 282 aa13.42□□□□□ -0.26
GTF3C3-205ENST00000448087 SPDYE4A6NLX3 237 aa13.39□□□□□ -0.27
GTF3C3-205ENST00000448087 SPDYE2BA6NHP3 402 aa13.29□□□□□ -0.28
GTF3C3-205ENST00000448087 SPDYE6P0CI01 402 aa13.29□□□□□ -0.28
GTF3C3-205ENST00000448087 SPDYE2Q495Y8 402 aa13.29□□□□□ -0.28
GTF3C3-205ENST00000448087 ZNF692Q9BU19 519 aaPredicted RBP13.26□□□□□ -0.29
GTF3C3-205ENST00000448087 SSUH2Q9Y2M2 353 aa13.2□□□□□ -0.3
GTF3C3-205ENST00000448087 RBM42Q9BTD8 480 aaKnown RBP13.19□□□□□ -0.3
GTF3C3-205ENST00000448087 PROM2Q8N271 834 aa13.18□□□□□ -0.3
GTF3C3-205ENST00000448087 PABPN1Q86U42 306 aaKnown RBP eCLIP13.1□□□□□ -0.31
GTF3C3-205ENST00000448087 AKT1S1Q96B36 256 aa13.06□□□□□ -0.32
GTF3C3-205ENST00000448087 FBXO3Q9UK99 471 aa12.97□□□□□ -0.33
GTF3C3-205ENST00000448087 REM2Q8IYK8 340 aaPredicted RBP12.95□□□□□ -0.34
GTF3C3-205ENST00000448087 SPDYE1Q8NFV5 336 aaPredicted RBP12.87□□□□□ -0.35
GTF3C3-205ENST00000448087 STAG3Q9UJ98 1225 aa12.87□□□□□ -0.35
GTF3C3-205ENST00000448087 CLEC11AQ9Y240 323 aa12.83□□□□□ -0.36
GTF3C3-205ENST00000448087 VASPP50552 380 aaPredicted RBP12.82□□□□□ -0.36
GTF3C3-205ENST00000448087 PITPNM1O00562 1244 aa12.81□□□□□ -0.36
GTF3C3-205ENST00000448087 PRR29P0C7W0 189 aa12.72□□□□□ -0.37
GTF3C3-205ENST00000448087 MIER1Q8N108 512 aa12.68□□□□□ -0.38
GTF3C3-205ENST00000448087 PLCD3Q8N3E9 789 aa12.68□□□□□ -0.38
GTF3C3-205ENST00000448087 IFNLR1Q8IU57 520 aaPredicted RBP12.65□□□□□ -0.38
GTF3C3-205ENST00000448087 CHRDL2Q6WN34 429 aa12.62□□□□□ -0.39
GTF3C3-205ENST00000448087 PLEKHG5O94827 1062 aa12.59□□□□□ -0.39
GTF3C3-205ENST00000448087 CREBZFQ9NS37 354 aa12.59□□□□□ -0.39
GTF3C3-205ENST00000448087 KLHL34Q8N239 644 aa12.56□□□□□ -0.4
GTF3C3-205ENST00000448087 POTEHQ6S545 545 aa12.55□□□□□ -0.4
GTF3C3-205ENST00000448087 FXR2P51116 673 aaKnown RBP eCLIP12.54□□□□□ -0.4
GTF3C3-205ENST00000448087 CHADLQ6NUI6 762 aa12.51□□□□□ -0.41
GTF3C3-205ENST00000448087 ZBTB47Q9UFB7 747 aaPredicted RBP12.51□□□□□ -0.41
GTF3C3-205ENST00000448087 PIP4P2Q8N4L2 257 aa12.5□□□□□ -0.41
GTF3C3-205ENST00000448087 PRKAR2AP13861 404 aaKnown RBP12.48□□□□□ -0.41
GTF3C3-205ENST00000448087 MNX1P50219 401 aaPredicted RBP12.48□□□□□ -0.41
GTF3C3-205ENST00000448087 SPOCK2Q92563 424 aa12.47□□□□□ -0.41
GTF3C3-205ENST00000448087 AMER1Q5JTC6 1135 aaPredicted RBP12.46□□□□□ -0.41
GTF3C3-205ENST00000448087 RTN4Q9NQC3 1192 aaKnown RBP12.45□□□□□ -0.42
GTF3C3-205ENST00000448087 FARP1Q9Y4F1 1045 aaPredicted RBP12.4□□□□□ -0.43
GTF3C3-205ENST00000448087 NPM1P06748 294 aaKnown RBP eCLIP12.36□□□□□ -0.43
GTF3C3-205ENST00000448087 NUBP1P53384 320 aa12.35□□□□□ -0.43
GTF3C3-205ENST00000448087 RASEFQ8IZ41 740 aa12.28□□□□□ -0.44
GTF3C3-205ENST00000448087 CIZ1Q9ULV3 898 aaPredicted RBP12.27□□□□□ -0.45
GTF3C3-205ENST00000448087 PKD2Q13563 968 aa12.26□□□□□ -0.45
GTF3C3-205ENST00000448087 FAM212AQ96EL1 285 aa12.24□□□□□ -0.45
GTF3C3-205ENST00000448087 DCAF8Q5TAQ9 597 aa12.23□□□□□ -0.45
GTF3C3-205ENST00000448087 GSE1Q14687 1217 aa12.22□□□□□ -0.45
GTF3C3-205ENST00000448087 TSPYL2Q9H2G4 693 aaPredicted RBP12.19□□□□□ -0.46
GTF3C3-205ENST00000448087 ECM2O94769 699 aaPredicted RBP12.17□□□□□ -0.46
GTF3C3-205ENST00000448087 CD44P16070 742 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms