RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 DMXL1Q9Y485 3027 aa6.5□□□□□ -1.37
FN1-211ENST00000443816 Q6ZRN7 208 aaPredicted RBP6.49□□□□□ -1.37
FN1-211ENST00000443816 ROMO1P60602 79 aa6.48□□□□□ -1.37
FN1-211ENST00000443816 CELSR2Q9HCU4 2923 aa6.47□□□□□ -1.37
FN1-211ENST00000443816 NBPF19A0A087WUL8 3843 aa6.45□□□□□ -1.38
FN1-211ENST00000443816 Q5VV11 94 aa6.41□□□□□ -1.38
FN1-211ENST00000443816 Q5XG85 94 aa6.41□□□□□ -1.38
FN1-211ENST00000443816 TENM1Q9UKZ4 2725 aa6.4□□□□□ -1.38
FN1-211ENST00000443816 A8MUU9 505 aa6.39□□□□□ -1.39
FN1-211ENST00000443816 A0A0A0MQY5 61 aa6.37□□□□□ -1.39
FN1-211ENST00000443816 C20orf166-AS1Q96NR2 134 aa6.37□□□□□ -1.39
FN1-211ENST00000443816 LOC400499M0QZD8 3231 aa6.36□□□□□ -1.39
FN1-211ENST00000443816 KRTAP29-1A8MX34 341 aaPredicted RBP6.36□□□□□ -1.39
FN1-211ENST00000443816 CELSR1Q9NYQ6 3014 aa6.35□□□□□ -1.39
FN1-211ENST00000443816 WDFY3Q8IZQ1 3526 aa6.34□□□□□ -1.39
FN1-211ENST00000443816 KRTAP11-1Q8IUC1 163 aa6.33□□□□□ -1.4
FN1-211ENST00000443816 TENM4Q6N022 2769 aa6.33□□□□□ -1.4
FN1-211ENST00000443816 DCHS2Q6V1P9 2916 aa6.33□□□□□ -1.4
FN1-211ENST00000443816 SPATA8Q6RVD6 105 aa6.32□□□□□ -1.4
FN1-211ENST00000443816 NOTCH2NLQ7Z3S9 236 aa6.32□□□□□ -1.4
FN1-211ENST00000443816 NIPBLQ6KC79 2804 aaeCLIP6.3□□□□□ -1.4
FN1-211ENST00000443816 ASPMQ8IZT6 3477 aa6.3□□□□□ -1.4
FN1-211ENST00000443816 KRTAP13-2Q52LG2 175 aa6.3□□□□□ -1.4
FN1-211ENST00000443816 NF1P21359 2839 aa6.3□□□□□ -1.4
FN1-211ENST00000443816 MYO15AQ9UKN7 3530 aa6.29□□□□□ -1.4
FN1-211ENST00000443816 KRTAP13-1Q8IUC0 172 aa6.29□□□□□ -1.4
FN1-211ENST00000443816 CYSTM1Q9H1C7 97 aa6.29□□□□□ -1.4
FN1-211ENST00000443816 ZANQ9Y493 2812 aa6.28□□□□□ -1.4
FN1-211ENST00000443816 HRNRQ86YZ3 2850 aaPredicted RBP6.24□□□□□ -1.41
FN1-211ENST00000443816 FBN2P35556 2912 aa6.24□□□□□ -1.41
FN1-211ENST00000443816 PRAC1Q96KF2 57 aa6.24□□□□□ -1.41
FN1-211ENST00000443816 KRTAP7-1Q8IUC3 87 aa6.22□□□□□ -1.41
FN1-211ENST00000443816 TNP1P09430 55 aa6.18□□□□□ -1.42
FN1-211ENST00000443816 LAMA5O15230 3695 aa6.13□□□□□ -1.43
FN1-211ENST00000443816 TPRXLQ17RH7 258 aa6.11□□□□□ -1.43
FN1-211ENST00000443816 TENM3Q9P273 2699 aa6.09□□□□□ -1.43
FN1-211ENST00000443816 XP32Q5T750 250 aa6.08□□□□□ -1.44
FN1-211ENST00000443816 A8MU10 97 aa6.06□□□□□ -1.44
FN1-211ENST00000443816 ZFHX3Q15911 3703 aa6.06□□□□□ -1.44
FN1-211ENST00000443816 RELNP78509 3460 aa6.03□□□□□ -1.44
FN1-211ENST00000443816 PRO2289Q9P1D8 64 aa6.03□□□□□ -1.44
FN1-211ENST00000443816 DCHS1Q96JQ0 3298 aa6.03□□□□□ -1.44
FN1-211ENST00000443816 KRTAP10-8P60410 259 aa6.03□□□□□ -1.44
FN1-211ENST00000443816 PKD1L1Q8TDX9 2849 aa6.01□□□□□ -1.45
FN1-211ENST00000443816 MXRA5Q9NR99 2828 aa6.01□□□□□ -1.45
FN1-211ENST00000443816 KRTAP1-4P0C5Y4 121 aa6.01□□□□□ -1.45
FN1-211ENST00000443816 KRTAP25-1Q3LHN0 102 aa6.01□□□□□ -1.45
FN1-211ENST00000443816 ZFHX4Q86UP3 3567 aa5.98□□□□□ -1.45
FN1-211ENST00000443816 KRTAP10-10P60014 251 aa5.97□□□□□ -1.45
FN1-211ENST00000443816 A0A1B0GVY2 172 aa5.97□□□□□ -1.45
FN1-211ENST00000443816 PP632Q6XCG6 107 aa5.96□□□□□ -1.45
FN1-211ENST00000443816 H3BS24 57 aa5.95□□□□□ -1.46
FN1-211ENST00000443816 DMDP11532 3685 aa5.94□□□□□ -1.46
FN1-211ENST00000443816 TENM2Q9NT68 2774 aa5.94□□□□□ -1.46
FN1-211ENST00000443816 VWFP04275 2813 aa5.94□□□□□ -1.46
FN1-211ENST00000443816 PDZD2O15018 2839 aa5.93□□□□□ -1.46
FN1-211ENST00000443816 TGP01266 2768 aa5.92□□□□□ -1.46
FN1-211ENST00000443816 SPENQ96T58 3664 aaKnown RBP5.92□□□□□ -1.46
FN1-211ENST00000443816 CSMD1Q96PZ7 3565 aa5.92□□□□□ -1.46
FN1-211ENST00000443816 C10orf95Q9H7T3 257 aa5.89□□□□□ -1.47
FN1-211ENST00000443816 KRTAP13-3Q3SY46 172 aa5.89□□□□□ -1.47
FN1-211ENST00000443816 A6NN06 94 aa5.87□□□□□ -1.47
FN1-211ENST00000443816 KRTAP16-1A8MUX0 517 aa5.84□□□□□ -1.47
FN1-211ENST00000443816 BSNQ9UPA5 3926 aa5.78□□□□□ -1.48
FN1-211ENST00000443816 SMG1Q96Q15 3661 aaKnown RBP5.77□□□□□ -1.49
FN1-211ENST00000443816 COL7A1Q02388 2944 aa5.73□□□□□ -1.49
FN1-211ENST00000443816 NDUFAF8A1L188 74 aa5.71□□□□□ -1.5
FN1-211ENST00000443816 TRRAPQ9Y4A5 3859 aa5.7□□□□□ -1.5
FN1-211ENST00000443816 MUC3AQ02505 3323 aa5.7□□□□□ -1.5
FN1-211ENST00000443816 H0YAA0 97 aa5.69□□□□□ -1.5
FN1-211ENST00000443816 VPS13CQ709C8 3753 aa5.65□□□□□ -1.51
FN1-211ENST00000443816 FBN1P35555 2871 aaKnown RBP5.63□□□□□ -1.51
FN1-211ENST00000443816 SVEP1Q4LDE5 3571 aa5.63□□□□□ -1.51
FN1-211ENST00000443816 P0C880 135 aa5.62□□□□□ -1.51
FN1-211ENST00000443816 MEGF8Q7Z7M0 2845 aa5.56□□□□□ -1.52
FN1-211ENST00000443816 CSMD2Q7Z408 3487 aa5.52□□□□□ -1.53
FN1-211ENST00000443816 OTOGQ6ZRI0 2925 aa5.52□□□□□ -1.53
FN1-211ENST00000443816 FBN3Q75N90 2809 aa5.52□□□□□ -1.53
FN1-211ENST00000443816 CUBNO60494 3623 aa5.5□□□□□ -1.53
FN1-211ENST00000443816 AKAP9Q99996 3911 aa5.49□□□□□ -1.53
FN1-211ENST00000443816 SRRM2Q9UQ35 2752 aaKnown RBP5.49□□□□□ -1.53
FN1-211ENST00000443816 ANK3Q12955 4377 aaKnown RBP5.47□□□□□ -1.53
FN1-211ENST00000443816 KRTAP13-4Q3LI77 160 aa5.43□□□□□ -1.54
FN1-211ENST00000443816 KRTAP12-2P59991 146 aa5.4□□□□□ -1.55
FN1-211ENST00000443816 ZNF469Q96JG9 3925 aaPredicted RBP5.36□□□□□ -1.55
FN1-211ENST00000443816 ALMS1Q8TCU4 4167 aa5.33□□□□□ -1.56
FN1-211ENST00000443816 KRTAP12-1P59990 96 aa5.31□□□□□ -1.56
FN1-211ENST00000443816 CSMD3Q7Z407 3707 aa5.27□□□□□ -1.57
FN1-211ENST00000443816 HUWE1Q7Z6Z7 4374 aaKnown RBP5.26□□□□□ -1.57
FN1-211ENST00000443816 KRTAP15-1Q3LI76 137 aa5.26□□□□□ -1.57
FN1-211ENST00000443816 MT1HL1P0DM35 61 aa5.21□□□□□ -1.58
FN1-211ENST00000443816 KRTAP3-1Q9BYR8 98 aa5.2□□□□□ -1.58
FN1-211ENST00000443816 DNAH1Q9P2D7 4330 aa5.15□□□□□ -1.58
FN1-211ENST00000443816 KRTAP10-12P60413 245 aa5.09□□□□□ -1.59
FN1-211ENST00000443816 KRTAP10-6P60371 365 aaPredicted RBP5.07□□□□□ -1.6
FN1-211ENST00000443816 KRTAP4-5Q9BYR2 181 aa5.05□□□□□ -1.6
FN1-211ENST00000443816 DNAH3Q8TD57 4116 aa5.03□□□□□ -1.6
FN1-211ENST00000443816 KRTAP10-4P60372 401 aaPredicted RBP4.99□□□□□ -1.61
FN1-211ENST00000443816 DNAH7Q8WXX0 4024 aa4.96□□□□□ -1.62
FN1-211ENST00000443816 CRCT1Q9UGL9 99 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms