RNA–Protein interactions for RNA: ENST00000442398.6

C2CD3-207, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 3,951 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-207ENST00000442398 MRPL34Q9BQ48 92 aaKnown RBP3.69□□□□□ -1.82
C2CD3-207ENST00000442398 LCA10Q71F78 164 aa3.68□□□□□ -1.82
C2CD3-207ENST00000442398 IGKV2D-30A0A075B6S6 120 aa3.67□□□□□ -1.82
C2CD3-207ENST00000442398 MMP24-AS1A0A0U1RRL7 71 aa3.67□□□□□ -1.82
C2CD3-207ENST00000442398 IGKV2-30P06310 120 aa3.67□□□□□ -1.82
C2CD3-207ENST00000442398 KRTAP13-1Q8IUC0 172 aa3.67□□□□□ -1.82
C2CD3-207ENST00000442398 TP53AIP1Q9HCN2 124 aa3.67□□□□□ -1.82
C2CD3-207ENST00000442398 SSBP3-AS1Q7Z2R9 100 aa3.67□□□□□ -1.82
C2CD3-207ENST00000442398 PRKDCP78527 4128 aaKnown RBP3.67□□□□□ -1.82
C2CD3-207ENST00000442398 DNAH7Q8WXX0 4024 aa3.67□□□□□ -1.82
C2CD3-207ENST00000442398 DMBT1Q9UGM3 2413 aaPredicted RBP3.66□□□□□ -1.82
C2CD3-207ENST00000442398 PLECQ15149 4684 aaKnown RBP3.66□□□□□ -1.82
C2CD3-207ENST00000442398 DNAH6Q9C0G6 4158 aa3.65□□□□□ -1.82
C2CD3-207ENST00000442398 A0A087X002 238 aa3.65□□□□□ -1.82
C2CD3-207ENST00000442398 NOTCH2NLQ7Z3S9 236 aa3.65□□□□□ -1.82
C2CD3-207ENST00000442398 VPS13DQ5THJ4 4388 aa3.65□□□□□ -1.83
C2CD3-207ENST00000442398 LIMD2Q9BT23 127 aa3.65□□□□□ -1.83
C2CD3-207ENST00000442398 PRR15LQ9BU68 103 aa3.65□□□□□ -1.83
C2CD3-207ENST00000442398 LINC00483Q53H64 154 aa3.64□□□□□ -1.83
C2CD3-207ENST00000442398 J3QL48 77 aa3.64□□□□□ -1.83
C2CD3-207ENST00000442398 H3BPC8 53 aa3.64□□□□□ -1.83
C2CD3-207ENST00000442398 SPAG11AQ6PDA7 123 aa3.64□□□□□ -1.83
C2CD3-207ENST00000442398 Q96NJ1 140 aa3.64□□□□□ -1.83
C2CD3-207ENST00000442398 FLG2Q5D862 2391 aaPredicted RBP3.64□□□□□ -1.83
C2CD3-207ENST00000442398 KRTAP29-1A8MX34 341 aaPredicted RBP3.63□□□□□ -1.83
C2CD3-207ENST00000442398 LINC01554Q52M75 96 aa3.63□□□□□ -1.83
C2CD3-207ENST00000442398 PRAC1Q96KF2 57 aa3.63□□□□□ -1.83
C2CD3-207ENST00000442398 DNHD1Q96M86 4753 aa3.62□□□□□ -1.83
C2CD3-207ENST00000442398 SPINK1P00995 79 aa3.62□□□□□ -1.83
C2CD3-207ENST00000442398 ZCCHC13Q8WW36 166 aaKnown RBP3.62□□□□□ -1.83
C2CD3-207ENST00000442398 A6NED7 52 aa3.62□□□□□ -1.83
C2CD3-207ENST00000442398 C7orf65Q6ZTY9 151 aa3.62□□□□□ -1.83
C2CD3-207ENST00000442398 COA5Q86WW8 74 aa3.62□□□□□ -1.83
C2CD3-207ENST00000442398 C9orf92A6NGG3 77 aa3.61□□□□□ -1.83
C2CD3-207ENST00000442398 LINC00304Q8N9R0 145 aa3.61□□□□□ -1.83
C2CD3-207ENST00000442398 DNAH17Q9UFH2 4485 aa3.6□□□□□ -1.83
C2CD3-207ENST00000442398 CYP4F30PQ9H0H9 118 aa3.6□□□□□ -1.83
C2CD3-207ENST00000442398 STARD9Q9P2P6 4700 aa3.6□□□□□ -1.83
C2CD3-207ENST00000442398 LOC101927531A0A1B0GV80 90 aa3.59□□□□□ -1.83
C2CD3-207ENST00000442398 Q1T7F1 81 aa3.59□□□□□ -1.83
C2CD3-207ENST00000442398 FAM229AH3BQW9 127 aa3.59□□□□□ -1.84
C2CD3-207ENST00000442398 Q8N9P0 234 aaPredicted RBP3.59□□□□□ -1.84
C2CD3-207ENST00000442398 KRTAP13-2Q52LG2 175 aa3.58□□□□□ -1.84
C2CD3-207ENST00000442398 SPANXA2-OT1Q8N9U9 137 aa3.58□□□□□ -1.84
C2CD3-207ENST00000442398 ASB16-AS1Q495Z4 193 aa3.58□□□□□ -1.84
C2CD3-207ENST00000442398 KMT2AQ03164 3969 aa3.57□□□□□ -1.84
C2CD3-207ENST00000442398 HECTD4Q9Y4D8 3996 aa3.57□□□□□ -1.84
C2CD3-207ENST00000442398 DNAH2Q9P225 4427 aa3.57□□□□□ -1.84
C2CD3-207ENST00000442398 Q5W150 140 aa3.57□□□□□ -1.84
C2CD3-207ENST00000442398 ACYP2P14621 99 aa3.56□□□□□ -1.84
C2CD3-207ENST00000442398 A6NN06 94 aa3.56□□□□□ -1.84
C2CD3-207ENST00000442398 IGLV7-46A0A075B6I9 117 aa3.55□□□□□ -1.84
C2CD3-207ENST00000442398 DNAH8Q96JB1 4490 aa3.55□□□□□ -1.84
C2CD3-207ENST00000442398 ATP11AUNQ6ZP68 121 aa3.55□□□□□ -1.84
C2CD3-207ENST00000442398 ADM2Q7Z4H4 148 aa3.54□□□□□ -1.84
C2CD3-207ENST00000442398 HRES1P13985 223 aa3.54□□□□□ -1.84
C2CD3-207ENST00000442398 Q75L30 129 aa3.54□□□□□ -1.84
C2CD3-207ENST00000442398 Q8N1X5 172 aa3.53□□□□□ -1.84
C2CD3-207ENST00000442398 FRAS1Q86XX4 4008 aa3.53□□□□□ -1.84
C2CD3-207ENST00000442398 ALMS1Q8TCU4 4167 aa3.53□□□□□ -1.84
C2CD3-207ENST00000442398 Q6ZSA8 131 aa3.53□□□□□ -1.85
C2CD3-207ENST00000442398 DNAH11Q96DT5 4516 aa3.51□□□□□ -1.85
C2CD3-207ENST00000442398 A0A1B0GU69 56 aa3.5□□□□□ -1.85
C2CD3-207ENST00000442398 KRTAP1-4P0C5Y4 121 aa3.5□□□□□ -1.85
C2CD3-207ENST00000442398 Q5VV11 94 aa3.5□□□□□ -1.85
C2CD3-207ENST00000442398 PKD1P98161 4303 aa3.48□□□□□ -1.85
C2CD3-207ENST00000442398 Q5VSD8 79 aa3.46□□□□□ -1.86
C2CD3-207ENST00000442398 DNAH5Q8TE73 4624 aa3.46□□□□□ -1.86
C2CD3-207ENST00000442398 KRTAP13-3Q3SY46 172 aa3.44□□□□□ -1.86
C2CD3-207ENST00000442398 FAT2Q9NYQ8 4349 aa3.44□□□□□ -1.86
C2CD3-207ENST00000442398 SPINK7P58062 85 aa3.43□□□□□ -1.86
C2CD3-207ENST00000442398 LINC01558Q9Y6Z2 57 aa3.42□□□□□ -1.86
C2CD3-207ENST00000442398 DMAC1Q96GE9 116 aa3.42□□□□□ -1.86
C2CD3-207ENST00000442398 LRP1BQ9NZR2 4599 aa3.41□□□□□ -1.86
C2CD3-207ENST00000442398 KRTAP16-1A8MUX0 517 aa3.41□□□□□ -1.86
C2CD3-207ENST00000442398 CDC42SE1Q9NRR8 79 aa3.41□□□□□ -1.86
C2CD3-207ENST00000442398 SACSQ9NZJ4 4579 aa3.4□□□□□ -1.86
C2CD3-207ENST00000442398 CSAG1Q6PB30 78 aa3.4□□□□□ -1.87
C2CD3-207ENST00000442398 UQCR11O14957 56 aa3.39□□□□□ -1.87
C2CD3-207ENST00000442398 HYDINQ4G0P3 5121 aa3.39□□□□□ -1.87
C2CD3-207ENST00000442398 MIR22HGQ0VDD5 57 aa3.38□□□□□ -1.87
C2CD3-207ENST00000442398 FAT1Q14517 4588 aa3.38□□□□□ -1.87
C2CD3-207ENST00000442398 A0A1B0GVY2 172 aa3.37□□□□□ -1.87
C2CD3-207ENST00000442398 PKHD1L1Q86WI1 4243 aa3.37□□□□□ -1.87
C2CD3-207ENST00000442398 ROMO1P60602 79 aa3.36□□□□□ -1.87
C2CD3-207ENST00000442398 VPS13BQ7Z7G8 4022 aa3.36□□□□□ -1.87
C2CD3-207ENST00000442398 SEC61BP60468 96 aaKnown RBP3.36□□□□□ -1.87
C2CD3-207ENST00000442398 RPS29P62273 56 aaKnown RBP3.35□□□□□ -1.87
C2CD3-207ENST00000442398 PKHD1P08F94 4074 aa3.35□□□□□ -1.87
C2CD3-207ENST00000442398 K7ERS5 55 aa3.32□□□□□ -1.88
C2CD3-207ENST00000442398 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
C2CD3-207ENST00000442398 DYNC1H1Q14204 4646 aaKnown RBP3.32□□□□□ -1.88
C2CD3-207ENST00000442398 A8MUU9 505 aa3.31□□□□□ -1.88
C2CD3-207ENST00000442398 C20orf166-AS1Q96NR2 134 aa3.31□□□□□ -1.88
C2CD3-207ENST00000442398 A0A0D9SG42 100 aa3.3□□□□□ -1.88
C2CD3-207ENST00000442398 APOBP04114 4563 aaKnown RBP3.3□□□□□ -1.88
C2CD3-207ENST00000442398 P0C880 135 aa3.3□□□□□ -1.88
C2CD3-207ENST00000442398 A0A1B0GU33 70 aa3.29□□□□□ -1.88
C2CD3-207ENST00000442398 NDUFAF8A1L188 74 aa3.29□□□□□ -1.88
C2CD3-207ENST00000442398 COX6B2Q6YFQ2 88 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 216.3 ms