RNA–Protein interactions for RNA: ENST00000437516.1

HLA-N-201, Transcript of major histocompatibility complex, class I, N (pseudogene), humanhuman

BASIC

Gene HLA-N, Length 135 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-N-201ENST00000437516 WNK1Q9H4A3 2382 aa2.54□□□□□ -2
HLA-N-201ENST00000437516 MAP1AP78559 2803 aaPredicted RBP2.54□□□□□ -2
HLA-N-201ENST00000437516 MXRA5Q9NR99 2828 aa2.54□□□□□ -2
HLA-N-201ENST00000437516 A6NN06 94 aa2.54□□□□□ -2
HLA-N-201ENST00000437516 RTL8CO15255 209 aa2.54□□□□□ -2
HLA-N-201ENST00000437516 ACYP2P14621 99 aa2.54□□□□□ -2
HLA-N-201ENST00000437516 KRTAP13-3Q3SY46 172 aa2.54□□□□□ -2
HLA-N-201ENST00000437516 SPAG11AQ6PDA7 123 aa2.54□□□□□ -2
HLA-N-201ENST00000437516 SPTSSBQ8NFR3 76 aa2.54□□□□□ -2
HLA-N-201ENST00000437516 NOTCH3Q9UM47 2321 aa2.54□□□□□ -2
HLA-N-201ENST00000437516 HIVEP2P31629 2446 aa2.53□□□□□ -2
HLA-N-201ENST00000437516 A0A087X002 238 aa2.53□□□□□ -2
HLA-N-201ENST00000437516 IGLV7-43P04211 117 aa2.53□□□□□ -2
HLA-N-201ENST00000437516 NOTCH2NLQ7Z3S9 236 aa2.53□□□□□ -2
HLA-N-201ENST00000437516 ANAPC11Q9NYG5 84 aa2.53□□□□□ -2
HLA-N-201ENST00000437516 TENM3Q9P273 2699 aa2.53□□□□□ -2.01
HLA-N-201ENST00000437516 SPINK7P58062 85 aa2.52□□□□□ -2.01
HLA-N-201ENST00000437516 Q5W150 140 aa2.52□□□□□ -2.01
HLA-N-201ENST00000437516 SPINK6Q6UWN8 80 aa2.52□□□□□ -2.01
HLA-N-201ENST00000437516 ZNF469Q96JG9 3925 aaPredicted RBP2.52□□□□□ -2.01
HLA-N-201ENST00000437516 FAM229AH3BQW9 127 aa2.51□□□□□ -2.01
HLA-N-201ENST00000437516 PRR26Q8N8Z3 221 aa2.51□□□□□ -2.01
HLA-N-201ENST00000437516 CIRBP-AS1Q8TBR5 109 aa2.51□□□□□ -2.01
HLA-N-201ENST00000437516 HERC1Q15751 4861 aa2.5□□□□□ -2.01
HLA-N-201ENST00000437516 DNAH1Q9P2D7 4330 aa2.5□□□□□ -2.01
HLA-N-201ENST00000437516 IGKV2-30P06310 120 aa2.5□□□□□ -2.01
HLA-N-201ENST00000437516 LINC00313P59037 77 aa2.5□□□□□ -2.01
HLA-N-201ENST00000437516 C7orf65Q6ZTY9 151 aa2.5□□□□□ -2.01
HLA-N-201ENST00000437516 DMAC1Q96GE9 116 aa2.5□□□□□ -2.01
HLA-N-201ENST00000437516 RBM12B-AS1Q9P1G2 102 aa2.49□□□□□ -2.01
HLA-N-201ENST00000437516 C1orf134Q5TEV5 83 aa2.48□□□□□ -2.01
HLA-N-201ENST00000437516 A0A1B0GU69 56 aa2.47□□□□□ -2.01
HLA-N-201ENST00000437516 SPATA8Q6RVD6 105 aa2.47□□□□□ -2.01
HLA-N-201ENST00000437516 ABCA13Q86UQ4 5058 aa2.47□□□□□ -2.01
HLA-N-201ENST00000437516 KRTAP16-1A8MUX0 517 aa2.46□□□□□ -2.02
HLA-N-201ENST00000437516 KRTAP13-2Q52LG2 175 aa2.46□□□□□ -2.02
HLA-N-201ENST00000437516 ACANP16112 2415 aa2.45□□□□□ -2.02
HLA-N-201ENST00000437516 PLA2G1BP04054 148 aaKnown RBP2.45□□□□□ -2.02
HLA-N-201ENST00000437516 RETNLBQ9BQ08 111 aa2.45□□□□□ -2.02
HLA-N-201ENST00000437516 IGKV2D-30A0A075B6S6 120 aa2.44□□□□□ -2.02
HLA-N-201ENST00000437516 UQCR11O14957 56 aa2.44□□□□□ -2.02
HLA-N-201ENST00000437516 MIR22HGQ0VDD5 57 aa2.44□□□□□ -2.02
HLA-N-201ENST00000437516 DNAH3Q8TD57 4116 aa2.42□□□□□ -2.02
HLA-N-201ENST00000437516 LY6G6CO95867 125 aa2.42□□□□□ -2.02
HLA-N-201ENST00000437516 C4orf48Q5BLP8 95 aa2.42□□□□□ -2.02
HLA-N-201ENST00000437516 Q6ZSA8 131 aa2.42□□□□□ -2.02
HLA-N-201ENST00000437516 SONP18583 2426 aaKnown RBP2.42□□□□□ -2.02
HLA-N-201ENST00000437516 ANK2Q01484 3957 aa2.42□□□□□ -2.02
HLA-N-201ENST00000437516 SPINK1P00995 79 aa2.41□□□□□ -2.02
HLA-N-201ENST00000437516 KRTAP1-4P0C5Y4 121 aa2.41□□□□□ -2.02
HLA-N-201ENST00000437516 KRTAP10-2P60368 255 aa2.41□□□□□ -2.02
HLA-N-201ENST00000437516 TYMSOSQ8TAI1 123 aa2.41□□□□□ -2.02
HLA-N-201ENST00000437516 HUWE1Q7Z6Z7 4374 aaKnown RBP2.41□□□□□ -2.02
HLA-N-201ENST00000437516 KRTAP9-7A8MTY7 169 aa2.4□□□□□ -2.03
HLA-N-201ENST00000437516 KRTAP10-1P60331 282 aa2.4□□□□□ -2.03
HLA-N-201ENST00000437516 RPS29P62273 56 aaKnown RBP2.39□□□□□ -2.03
HLA-N-201ENST00000437516 PRAC1Q96KF2 57 aa2.39□□□□□ -2.03
HLA-N-201ENST00000437516 ADM2Q7Z4H4 148 aa2.38□□□□□ -2.03
HLA-N-201ENST00000437516 DYNC2H1Q8NCM8 4307 aaKnown RBP2.37□□□□□ -2.03
HLA-N-201ENST00000437516 LINC01554Q52M75 96 aa2.37□□□□□ -2.03
HLA-N-201ENST00000437516 CMYA5Q8N3K9 4069 aa2.37□□□□□ -2.03
HLA-N-201ENST00000437516 Q8N1X5 172 aa2.36□□□□□ -2.03
HLA-N-201ENST00000437516 LINC00304Q8N9R0 145 aa2.36□□□□□ -2.03
HLA-N-201ENST00000437516 DNAH9Q9NYC9 4486 aa2.36□□□□□ -2.03
HLA-N-201ENST00000437516 A8MUU9 505 aa2.35□□□□□ -2.03
HLA-N-201ENST00000437516 DNAH10Q8IVF4 4471 aa2.35□□□□□ -2.03
HLA-N-201ENST00000437516 TRRAPQ9Y4A5 3859 aa2.34□□□□□ -2.03
HLA-N-201ENST00000437516 CSAG1Q6PB30 78 aa2.34□□□□□ -2.03
HLA-N-201ENST00000437516 C20orf166-AS1Q96NR2 134 aa2.34□□□□□ -2.03
HLA-N-201ENST00000437516 PRKDCP78527 4128 aaKnown RBP2.33□□□□□ -2.04
HLA-N-201ENST00000437516 FAT4Q6V0I7 4981 aa2.33□□□□□ -2.04
HLA-N-201ENST00000437516 FSIP2Q5CZC0 6907 aa2.33□□□□□ -2.04
HLA-N-201ENST00000437516 A0A1B0GU33 70 aa2.32□□□□□ -2.04
HLA-N-201ENST00000437516 H1FX-AS1Q4G0G2 97 aa2.32□□□□□ -2.04
HLA-N-201ENST00000437516 ALMS1Q8TCU4 4167 aa2.31□□□□□ -2.04
HLA-N-201ENST00000437516 H0YAA0 97 aa2.31□□□□□ -2.04
HLA-N-201ENST00000437516 KRTAP3-1Q9BYR8 98 aa2.31□□□□□ -2.04
HLA-N-201ENST00000437516 C9orf92A6NGG3 77 aa2.3□□□□□ -2.04
HLA-N-201ENST00000437516 COX6B2Q6YFQ2 88 aa2.3□□□□□ -2.04
HLA-N-201ENST00000437516 COL7A1Q02388 2944 aa2.3□□□□□ -2.04
HLA-N-201ENST00000437516 DNAH17Q9UFH2 4485 aa2.29□□□□□ -2.04
HLA-N-201ENST00000437516 KRTAP25-1Q3LHN0 102 aa2.29□□□□□ -2.04
HLA-N-201ENST00000437516 CRCT1Q9UGL9 99 aa2.29□□□□□ -2.04
HLA-N-201ENST00000437516 DNAH8Q96JB1 4490 aa2.29□□□□□ -2.04
HLA-N-201ENST00000437516 VPS13DQ5THJ4 4388 aa2.28□□□□□ -2.04
HLA-N-201ENST00000437516 K7ERS5 55 aa2.28□□□□□ -2.04
HLA-N-201ENST00000437516 SMR3BP02814 79 aaPredicted RBP2.27□□□□□ -2.05
HLA-N-201ENST00000437516 KRTAP10-4P60372 401 aaPredicted RBP2.26□□□□□ -2.05
HLA-N-201ENST00000437516 LYSTQ99698 3801 aa2.26□□□□□ -2.05
HLA-N-201ENST00000437516 PLECQ15149 4684 aaKnown RBP2.26□□□□□ -2.05
HLA-N-201ENST00000437516 RNF213Q63HN8 5207 aa2.25□□□□□ -2.05
HLA-N-201ENST00000437516 A0A1B0GVY2 172 aa2.24□□□□□ -2.05
HLA-N-201ENST00000437516 ROMO1P60602 79 aa2.23□□□□□ -2.05
HLA-N-201ENST00000437516 RPL37P61927 97 aaKnown RBP2.23□□□□□ -2.05
HLA-N-201ENST00000437516 DNAH7Q8WXX0 4024 aa2.23□□□□□ -2.05
HLA-N-201ENST00000437516 STARD9Q9P2P6 4700 aa2.22□□□□□ -2.05
HLA-N-201ENST00000437516 STAB2Q8WWQ8 2551 aa2.22□□□□□ -2.05
HLA-N-201ENST00000437516 DNAH2Q9P225 4427 aa2.22□□□□□ -2.05
HLA-N-201ENST00000437516 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
HLA-N-201ENST00000437516 KRTAP10-6P60371 365 aaPredicted RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms