RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 LINC00472Q9H8W2 130 aa5.77□□□□□ -1.49
SNX13-203ENST00000428135 Q6ZR54 194 aa5.76□□□□□ -1.49
SNX13-203ENST00000428135 R4GN34 69 aa5.74□□□□□ -1.49
SNX13-203ENST00000428135 KRTAP11-1Q8IUC1 163 aa5.73□□□□□ -1.49
SNX13-203ENST00000428135 CYSTM1Q9H1C7 97 aa5.73□□□□□ -1.49
SNX13-203ENST00000428135 SPRR1BP22528 89 aa5.72□□□□□ -1.49
SNX13-203ENST00000428135 PKD1L1Q8TDX9 2849 aa5.72□□□□□ -1.49
SNX13-203ENST00000428135 Q1T7F1 81 aa5.69□□□□□ -1.5
SNX13-203ENST00000428135 TENM2Q9NT68 2774 aa5.68□□□□□ -1.5
SNX13-203ENST00000428135 MXRA5Q9NR99 2828 aa5.68□□□□□ -1.5
SNX13-203ENST00000428135 CSMD1Q96PZ7 3565 aa5.68□□□□□ -1.5
SNX13-203ENST00000428135 KTN1-AS1Q86SY8 53 aa5.68□□□□□ -1.5
SNX13-203ENST00000428135 NOTCH2NLQ7Z3S9 236 aa5.67□□□□□ -1.5
SNX13-203ENST00000428135 CSMD2Q7Z408 3487 aa5.67□□□□□ -1.5
SNX13-203ENST00000428135 M0QZ58 72 aa5.66□□□□□ -1.5
SNX13-203ENST00000428135 LINC00483Q53H64 154 aa5.66□□□□□ -1.5
SNX13-203ENST00000428135 TENM1Q9UKZ4 2725 aa5.66□□□□□ -1.5
SNX13-203ENST00000428135 CELSR1Q9NYQ6 3014 aa5.66□□□□□ -1.5
SNX13-203ENST00000428135 KRTAP4-16G5E9R7 235 aaPredicted RBP5.63□□□□□ -1.51
SNX13-203ENST00000428135 LUZP6Q538Z0 58 aa5.63□□□□□ -1.51
SNX13-203ENST00000428135 LCA10Q71F78 164 aa5.63□□□□□ -1.51
SNX13-203ENST00000428135 ADM2Q7Z4H4 148 aa5.63□□□□□ -1.51
SNX13-203ENST00000428135 DMAC1Q96GE9 116 aa5.63□□□□□ -1.51
SNX13-203ENST00000428135 PRAC1Q96KF2 57 aa5.63□□□□□ -1.51
SNX13-203ENST00000428135 Q6ZRN7 208 aaPredicted RBP5.63□□□□□ -1.51
SNX13-203ENST00000428135 SPATA8Q6RVD6 105 aa5.61□□□□□ -1.51
SNX13-203ENST00000428135 OXTP01178 125 aa5.6□□□□□ -1.51
SNX13-203ENST00000428135 Q75L30 129 aa5.59□□□□□ -1.51
SNX13-203ENST00000428135 KRTAP7-1Q8IUC3 87 aa5.59□□□□□ -1.51
SNX13-203ENST00000428135 LINC01558Q9Y6Z2 57 aa5.59□□□□□ -1.51
SNX13-203ENST00000428135 VWFP04275 2813 aa5.59□□□□□ -1.52
SNX13-203ENST00000428135 TENM3Q9P273 2699 aa5.59□□□□□ -1.52
SNX13-203ENST00000428135 SVEP1Q4LDE5 3571 aa5.58□□□□□ -1.52
SNX13-203ENST00000428135 FP248Q71RG6 208 aaPredicted RBP5.58□□□□□ -1.52
SNX13-203ENST00000428135 PDZD2O15018 2839 aa5.57□□□□□ -1.52
SNX13-203ENST00000428135 FBN1P35555 2871 aaKnown RBP5.57□□□□□ -1.52
SNX13-203ENST00000428135 SPENQ96T58 3664 aaKnown RBP5.56□□□□□ -1.52
SNX13-203ENST00000428135 CUBNO60494 3623 aa5.56□□□□□ -1.52
SNX13-203ENST00000428135 Q5VV11 94 aa5.55□□□□□ -1.52
SNX13-203ENST00000428135 KRTAP13-2Q52LG2 175 aa5.55□□□□□ -1.52
SNX13-203ENST00000428135 OTOGQ6ZRI0 2925 aa5.55□□□□□ -1.52
SNX13-203ENST00000428135 PLAC4Q8WY50 150 aa5.54□□□□□ -1.52
SNX13-203ENST00000428135 H1FX-AS1Q4G0G2 97 aa5.52□□□□□ -1.53
SNX13-203ENST00000428135 Q5XG85 94 aa5.51□□□□□ -1.53
SNX13-203ENST00000428135 RPL37P61927 97 aaKnown RBP5.51□□□□□ -1.53
SNX13-203ENST00000428135 KRTAP29-1A8MX34 341 aaPredicted RBP5.48□□□□□ -1.53
SNX13-203ENST00000428135 TGP01266 2768 aa5.47□□□□□ -1.53
SNX13-203ENST00000428135 C20orf166-AS1Q96NR2 134 aa5.46□□□□□ -1.54
SNX13-203ENST00000428135 A8MU10 97 aa5.44□□□□□ -1.54
SNX13-203ENST00000428135 ROMO1P60602 79 aa5.43□□□□□ -1.54
SNX13-203ENST00000428135 A8MUU9 505 aa5.43□□□□□ -1.54
SNX13-203ENST00000428135 KRTAP13-1Q8IUC0 172 aa5.4□□□□□ -1.54
SNX13-203ENST00000428135 A0A1B0GVY2 172 aa5.39□□□□□ -1.55
SNX13-203ENST00000428135 BSNQ9UPA5 3926 aa5.37□□□□□ -1.55
SNX13-203ENST00000428135 ASB16-AS1Q495Z4 193 aa5.35□□□□□ -1.55
SNX13-203ENST00000428135 RPS29P62273 56 aaKnown RBP5.35□□□□□ -1.55
SNX13-203ENST00000428135 SRRM2Q9UQ35 2752 aaKnown RBP5.33□□□□□ -1.56
SNX13-203ENST00000428135 TRRAPQ9Y4A5 3859 aa5.33□□□□□ -1.56
SNX13-203ENST00000428135 ANK3Q12955 4377 aaKnown RBP5.31□□□□□ -1.56
SNX13-203ENST00000428135 KRTAP1-4P0C5Y4 121 aa5.25□□□□□ -1.57
SNX13-203ENST00000428135 XP32Q5T750 250 aa5.25□□□□□ -1.57
SNX13-203ENST00000428135 A0A0A0MQY5 61 aa5.2□□□□□ -1.58
SNX13-203ENST00000428135 KRTAP10-8P60410 259 aa5.2□□□□□ -1.58
SNX13-203ENST00000428135 H3BS24 57 aa5.18□□□□□ -1.58
SNX13-203ENST00000428135 VPS13CQ709C8 3753 aa5.17□□□□□ -1.58
SNX13-203ENST00000428135 KRTAP10-10P60014 251 aa5.15□□□□□ -1.59
SNX13-203ENST00000428135 COL7A1Q02388 2944 aa5.14□□□□□ -1.59
SNX13-203ENST00000428135 TNP1P09430 55 aa5.14□□□□□ -1.59
SNX13-203ENST00000428135 KRTAP25-1Q3LHN0 102 aa5.11□□□□□ -1.59
SNX13-203ENST00000428135 C10orf95Q9H7T3 257 aa5.1□□□□□ -1.59
SNX13-203ENST00000428135 ZNF469Q96JG9 3925 aaPredicted RBP5.08□□□□□ -1.6
SNX13-203ENST00000428135 TPRXLQ17RH7 258 aa5.07□□□□□ -1.6
SNX13-203ENST00000428135 FBN3Q75N90 2809 aa5.06□□□□□ -1.6
SNX13-203ENST00000428135 A6NN06 94 aa5.05□□□□□ -1.6
SNX13-203ENST00000428135 KRTAP13-3Q3SY46 172 aa5.04□□□□□ -1.6
SNX13-203ENST00000428135 KRTAP16-1A8MUX0 517 aa5□□□□□ -1.61
SNX13-203ENST00000428135 NDUFAF8A1L188 74 aa4.99□□□□□ -1.61
SNX13-203ENST00000428135 P0C880 135 aa4.99□□□□□ -1.61
SNX13-203ENST00000428135 AKAP9Q99996 3911 aa4.98□□□□□ -1.61
SNX13-203ENST00000428135 KRTAP4-5Q9BYR2 181 aa4.96□□□□□ -1.61
SNX13-203ENST00000428135 H0YAA0 97 aa4.95□□□□□ -1.62
SNX13-203ENST00000428135 HUWE1Q7Z6Z7 4374 aaKnown RBP4.91□□□□□ -1.62
SNX13-203ENST00000428135 CSMD3Q7Z407 3707 aa4.9□□□□□ -1.62
SNX13-203ENST00000428135 MEGF8Q7Z7M0 2845 aa4.88□□□□□ -1.63
SNX13-203ENST00000428135 PRO2289Q9P1D8 64 aa4.87□□□□□ -1.63
SNX13-203ENST00000428135 DNHD1Q96M86 4753 aa4.83□□□□□ -1.64
SNX13-203ENST00000428135 PP632Q6XCG6 107 aa4.78□□□□□ -1.64
SNX13-203ENST00000428135 KRTAP12-2P59991 146 aa4.75□□□□□ -1.65
SNX13-203ENST00000428135 DNAH9Q9NYC9 4486 aa4.72□□□□□ -1.65
SNX13-203ENST00000428135 MT1HL1P0DM35 61 aa4.72□□□□□ -1.65
SNX13-203ENST00000428135 KRTAP3-1Q9BYR8 98 aa4.65□□□□□ -1.66
SNX13-203ENST00000428135 ALMS1Q8TCU4 4167 aa4.62□□□□□ -1.67
SNX13-203ENST00000428135 KRTAP12-1P59990 96 aa4.6□□□□□ -1.67
SNX13-203ENST00000428135 KRTAP10-4P60372 401 aaPredicted RBP4.57□□□□□ -1.68
SNX13-203ENST00000428135 PLECQ15149 4684 aaKnown RBP4.56□□□□□ -1.68
SNX13-203ENST00000428135 DNAH5Q8TE73 4624 aa4.55□□□□□ -1.68
SNX13-203ENST00000428135 PRKDCP78527 4128 aaKnown RBP4.54□□□□□ -1.68
SNX13-203ENST00000428135 KRTAP13-4Q3LI77 160 aa4.54□□□□□ -1.68
SNX13-203ENST00000428135 CRCT1Q9UGL9 99 aa4.52□□□□□ -1.69
SNX13-203ENST00000428135 DNAH1Q9P2D7 4330 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms