RNA–Protein interactions for RNA: ENST00000427076.5

POLR2J4-202, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 6,466 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-202ENST00000427076 BAHCC1Q9P281 2608 aa5.83□□□□□ -1.48
POLR2J4-202ENST00000427076 MYO15AQ9UKN7 3530 aa5.83□□□□□ -1.48
POLR2J4-202ENST00000427076 PRUNE2Q8WUY3 3088 aa5.83□□□□□ -1.48
POLR2J4-202ENST00000427076 UBR5O95071 2799 aaPredicted RBP5.82□□□□□ -1.48
POLR2J4-202ENST00000427076 CFAP47Q6ZTR5 3102 aa5.81□□□□□ -1.48
POLR2J4-202ENST00000427076 NSD1Q96L73 2696 aaPredicted RBP5.8□□□□□ -1.48
POLR2J4-202ENST00000427076 SPTBN5Q9NRC6 3674 aaKnown RBP5.79□□□□□ -1.48
POLR2J4-202ENST00000427076 DSPP15924 2871 aaKnown RBP5.78□□□□□ -1.48
POLR2J4-202ENST00000427076 KRTAP21-3Q3LHN1 58 aa5.77□□□□□ -1.49
POLR2J4-202ENST00000427076 KALRNO60229 2985 aa5.75□□□□□ -1.49
POLR2J4-202ENST00000427076 KRTAP1-4P0C5Y4 121 aa5.75□□□□□ -1.49
POLR2J4-202ENST00000427076 DMXL2Q8TDJ6 3036 aa5.74□□□□□ -1.49
POLR2J4-202ENST00000427076 ITPR2Q14571 2701 aa5.71□□□□□ -1.49
POLR2J4-202ENST00000427076 ASH1LQ9NR48 2969 aaKnown RBP5.71□□□□□ -1.49
POLR2J4-202ENST00000427076 APCP25054 2843 aa5.69□□□□□ -1.5
POLR2J4-202ENST00000427076 VCANP13611 3396 aa5.69□□□□□ -1.5
POLR2J4-202ENST00000427076 TACC2O95359 2948 aa5.68□□□□□ -1.5
POLR2J4-202ENST00000427076 SPEGQ15772 3267 aa5.67□□□□□ -1.5
POLR2J4-202ENST00000427076 KMT2BQ9UMN6 2715 aaPredicted RBP5.67□□□□□ -1.5
POLR2J4-202ENST00000427076 USP34Q70CQ2 3546 aa5.67□□□□□ -1.5
POLR2J4-202ENST00000427076 IGSF10Q6WRI0 2623 aa5.66□□□□□ -1.5
POLR2J4-202ENST00000427076 CRYBG3Q68DQ2 2970 aa5.66□□□□□ -1.5
POLR2J4-202ENST00000427076 ITPR1Q14643 2758 aa5.65□□□□□ -1.5
POLR2J4-202ENST00000427076 CRCT1Q9UGL9 99 aa5.64□□□□□ -1.51
POLR2J4-202ENST00000427076 KRTAP13-3Q3SY46 172 aa5.64□□□□□ -1.51
POLR2J4-202ENST00000427076 HIVEP1P15822 2718 aa5.63□□□□□ -1.51
POLR2J4-202ENST00000427076 UTP20O75691 2785 aaKnown RBP5.62□□□□□ -1.51
POLR2J4-202ENST00000427076 KRTAP15-1Q3LI76 137 aa5.62□□□□□ -1.51
POLR2J4-202ENST00000427076 WDFY3Q8IZQ1 3526 aa5.61□□□□□ -1.51
POLR2J4-202ENST00000427076 ASPMQ8IZT6 3477 aa5.61□□□□□ -1.51
POLR2J4-202ENST00000427076 KRTAP13-4Q3LI77 160 aa5.61□□□□□ -1.51
POLR2J4-202ENST00000427076 CSMD1Q96PZ7 3565 aa5.58□□□□□ -1.52
POLR2J4-202ENST00000427076 LRBAP50851 2863 aa5.57□□□□□ -1.52
POLR2J4-202ENST00000427076 ATMQ13315 3056 aa5.56□□□□□ -1.52
POLR2J4-202ENST00000427076 LAMA1P25391 3075 aa5.56□□□□□ -1.52
POLR2J4-202ENST00000427076 KRTAP12-1P59990 96 aa5.55□□□□□ -1.52
POLR2J4-202ENST00000427076 NBEAQ8NFP9 2946 aa5.54□□□□□ -1.52
POLR2J4-202ENST00000427076 COL12A1Q99715 3063 aa5.53□□□□□ -1.52
POLR2J4-202ENST00000427076 LOC400499M0QZD8 3231 aa5.53□□□□□ -1.52
POLR2J4-202ENST00000427076 ZFHX4Q86UP3 3567 aa5.52□□□□□ -1.53
POLR2J4-202ENST00000427076 BOD1L1Q8NFC6 3051 aa5.51□□□□□ -1.53
POLR2J4-202ENST00000427076 ADGRG4Q8IZF6 3080 aa5.5□□□□□ -1.53
POLR2J4-202ENST00000427076 CELSR2Q9HCU4 2923 aa5.49□□□□□ -1.53
POLR2J4-202ENST00000427076 FRYLO94915 3013 aa5.48□□□□□ -1.53
POLR2J4-202ENST00000427076 TENM4Q6N022 2769 aa5.45□□□□□ -1.54
POLR2J4-202ENST00000427076 FLNCQ14315 2725 aa5.45□□□□□ -1.54
POLR2J4-202ENST00000427076 ZZEF1O43149 2961 aa5.43□□□□□ -1.54
POLR2J4-202ENST00000427076 LAMA5O15230 3695 aa5.41□□□□□ -1.54
POLR2J4-202ENST00000427076 DCHS2Q6V1P9 2916 aa5.39□□□□□ -1.55
POLR2J4-202ENST00000427076 INE1O15225 51 aa5.36□□□□□ -1.55
POLR2J4-202ENST00000427076 RELNP78509 3460 aa5.36□□□□□ -1.55
POLR2J4-202ENST00000427076 NIPBLQ6KC79 2804 aaeCLIP5.36□□□□□ -1.55
POLR2J4-202ENST00000427076 TNRC18O15417 2968 aaPredicted RBP5.34□□□□□ -1.55
POLR2J4-202ENST00000427076 ZFHX3Q15911 3703 aa5.32□□□□□ -1.56
POLR2J4-202ENST00000427076 KRTAP3-1Q9BYR8 98 aa5.3□□□□□ -1.56
POLR2J4-202ENST00000427076 DMDP11532 3685 aa5.3□□□□□ -1.56
POLR2J4-202ENST00000427076 TENM1Q9UKZ4 2725 aa5.29□□□□□ -1.56
POLR2J4-202ENST00000427076 TENM3Q9P273 2699 aa5.28□□□□□ -1.56
POLR2J4-202ENST00000427076 TGP01266 2768 aa5.27□□□□□ -1.57
POLR2J4-202ENST00000427076 NF1P21359 2839 aa5.26□□□□□ -1.57
POLR2J4-202ENST00000427076 SMG1Q96Q15 3661 aaKnown RBP5.26□□□□□ -1.57
POLR2J4-202ENST00000427076 EYSQ5T1H1 3165 aa5.25□□□□□ -1.57
POLR2J4-202ENST00000427076 ZANQ9Y493 2812 aa5.24□□□□□ -1.57
POLR2J4-202ENST00000427076 DMXL1Q9Y485 3027 aa5.23□□□□□ -1.57
POLR2J4-202ENST00000427076 FBN2P35556 2912 aa5.2□□□□□ -1.58
POLR2J4-202ENST00000427076 KRTAP10-6P60371 365 aaPredicted RBP5.19□□□□□ -1.58
POLR2J4-202ENST00000427076 TENM2Q9NT68 2774 aa5.18□□□□□ -1.58
POLR2J4-202ENST00000427076 CELSR1Q9NYQ6 3014 aa5.16□□□□□ -1.58
POLR2J4-202ENST00000427076 KRTAP10-12P60413 245 aa5.14□□□□□ -1.59
POLR2J4-202ENST00000427076 CUBNO60494 3623 aa5.13□□□□□ -1.59
POLR2J4-202ENST00000427076 SPENQ96T58 3664 aaKnown RBP5.12□□□□□ -1.59
POLR2J4-202ENST00000427076 SVEP1Q4LDE5 3571 aa5.12□□□□□ -1.59
POLR2J4-202ENST00000427076 KRTAP10-5P60370 271 aa5.11□□□□□ -1.59
POLR2J4-202ENST00000427076 PKD1L1Q8TDX9 2849 aa5.1□□□□□ -1.59
POLR2J4-202ENST00000427076 PDZD2O15018 2839 aa5.09□□□□□ -1.59
POLR2J4-202ENST00000427076 HRNRQ86YZ3 2850 aaPredicted RBP5.09□□□□□ -1.59
POLR2J4-202ENST00000427076 VWFP04275 2813 aa5.06□□□□□ -1.6
POLR2J4-202ENST00000427076 NBPF19A0A087WUL8 3843 aa5.04□□□□□ -1.6
POLR2J4-202ENST00000427076 LCE3AQ5TA76 89 aa5.03□□□□□ -1.6
POLR2J4-202ENST00000427076 KRTAP12-3P60328 96 aa5.01□□□□□ -1.61
POLR2J4-202ENST00000427076 MXRA5Q9NR99 2828 aa4.96□□□□□ -1.62
POLR2J4-202ENST00000427076 KRTAP3-2Q9BYR7 98 aa4.94□□□□□ -1.62
POLR2J4-202ENST00000427076 SRRM2Q9UQ35 2752 aaKnown RBP4.92□□□□□ -1.62
POLR2J4-202ENST00000427076 KRTAP3-3Q9BYR6 98 aa4.9□□□□□ -1.63
POLR2J4-202ENST00000427076 CSMD3Q7Z407 3707 aa4.89□□□□□ -1.63
POLR2J4-202ENST00000427076 VPS13CQ709C8 3753 aa4.85□□□□□ -1.63
POLR2J4-202ENST00000427076 LORP23490 312 aaPredicted RBP4.84□□□□□ -1.63
POLR2J4-202ENST00000427076 MT1HL1P0DM35 61 aa4.83□□□□□ -1.64
POLR2J4-202ENST00000427076 KRTAP4-5Q9BYR2 181 aa4.82□□□□□ -1.64
POLR2J4-202ENST00000427076 ALMS1Q8TCU4 4167 aa4.8□□□□□ -1.64
POLR2J4-202ENST00000427076 KRTAP8-1Q8IUC2 63 aa4.77□□□□□ -1.65
POLR2J4-202ENST00000427076 CSMD2Q7Z408 3487 aa4.75□□□□□ -1.65
POLR2J4-202ENST00000427076 FBN1P35555 2871 aaKnown RBP4.74□□□□□ -1.65
POLR2J4-202ENST00000427076 ANK3Q12955 4377 aaKnown RBP4.74□□□□□ -1.65
POLR2J4-202ENST00000427076 FBN3Q75N90 2809 aa4.73□□□□□ -1.65
POLR2J4-202ENST00000427076 MEGF8Q7Z7M0 2845 aa4.73□□□□□ -1.65
POLR2J4-202ENST00000427076 MUC3AQ02505 3323 aa4.72□□□□□ -1.65
POLR2J4-202ENST00000427076 COL7A1Q02388 2944 aa4.68□□□□□ -1.66
POLR2J4-202ENST00000427076 HUWE1Q7Z6Z7 4374 aaKnown RBP4.67□□□□□ -1.66
POLR2J4-202ENST00000427076 KRTAP23-1A1A580 65 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms