RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 NSD1Q96L73 2696 aaPredicted RBP4.52□□□□□ -1.69
CTNND1-207ENST00000426142 KRTAP13-2Q52LG2 175 aa4.51□□□□□ -1.69
CTNND1-207ENST00000426142 ASH1LQ9NR48 2969 aaKnown RBP4.51□□□□□ -1.69
CTNND1-207ENST00000426142 HIVEP1P15822 2718 aa4.49□□□□□ -1.69
CTNND1-207ENST00000426142 DMBT1Q9UGM3 2413 aaPredicted RBP4.49□□□□□ -1.69
CTNND1-207ENST00000426142 ROMO1P60602 79 aa4.49□□□□□ -1.69
CTNND1-207ENST00000426142 DMXL1Q9Y485 3027 aa4.47□□□□□ -1.69
CTNND1-207ENST00000426142 ZZEF1O43149 2961 aa4.47□□□□□ -1.69
CTNND1-207ENST00000426142 APCP25054 2843 aa4.46□□□□□ -1.69
CTNND1-207ENST00000426142 KRTAP13-1Q8IUC0 172 aa4.46□□□□□ -1.7
CTNND1-207ENST00000426142 ASB16-AS1Q495Z4 193 aa4.45□□□□□ -1.7
CTNND1-207ENST00000426142 MYO15AQ9UKN7 3530 aa4.45□□□□□ -1.7
CTNND1-207ENST00000426142 RPS29P62273 56 aaKnown RBP4.45□□□□□ -1.7
CTNND1-207ENST00000426142 KMT2BQ9UMN6 2715 aaPredicted RBP4.44□□□□□ -1.7
CTNND1-207ENST00000426142 A8MU10 97 aa4.41□□□□□ -1.7
CTNND1-207ENST00000426142 CELSR2Q9HCU4 2923 aa4.41□□□□□ -1.7
CTNND1-207ENST00000426142 A8MUU9 505 aa4.41□□□□□ -1.7
CTNND1-207ENST00000426142 C20orf166-AS1Q96NR2 134 aa4.4□□□□□ -1.7
CTNND1-207ENST00000426142 KRTAP21-3Q3LHN1 58 aa4.4□□□□□ -1.71
CTNND1-207ENST00000426142 TENM4Q6N022 2769 aa4.39□□□□□ -1.71
CTNND1-207ENST00000426142 LOC400499M0QZD8 3231 aa4.39□□□□□ -1.71
CTNND1-207ENST00000426142 DCHS2Q6V1P9 2916 aa4.36□□□□□ -1.71
CTNND1-207ENST00000426142 ZANQ9Y493 2812 aa4.36□□□□□ -1.71
CTNND1-207ENST00000426142 HRNRQ86YZ3 2850 aaPredicted RBP4.34□□□□□ -1.71
CTNND1-207ENST00000426142 A0A1B0GVY2 172 aa4.33□□□□□ -1.72
CTNND1-207ENST00000426142 NIPBLQ6KC79 2804 aaeCLIP4.32□□□□□ -1.721e-6■□□□□ 9
CTNND1-207ENST00000426142 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
CTNND1-207ENST00000426142 WDFY3Q8IZQ1 3526 aa4.3□□□□□ -1.72
CTNND1-207ENST00000426142 H3BS24 57 aa4.3□□□□□ -1.72
CTNND1-207ENST00000426142 ASPMQ8IZT6 3477 aa4.29□□□□□ -1.72
CTNND1-207ENST00000426142 KRTAP1-4P0C5Y4 121 aa4.29□□□□□ -1.72
CTNND1-207ENST00000426142 FBN2P35556 2912 aa4.28□□□□□ -1.72
CTNND1-207ENST00000426142 RELNP78509 3460 aa4.28□□□□□ -1.72
CTNND1-207ENST00000426142 XP32Q5T750 250 aa4.26□□□□□ -1.73
CTNND1-207ENST00000426142 NF1P21359 2839 aa4.25□□□□□ -1.73
CTNND1-207ENST00000426142 KRTAP25-1Q3LHN0 102 aa4.24□□□□□ -1.73
CTNND1-207ENST00000426142 P0C880 135 aa4.24□□□□□ -1.73
CTNND1-207ENST00000426142 KRTAP10-8P60410 259 aa4.24□□□□□ -1.73
CTNND1-207ENST00000426142 A6NN06 94 aa4.24□□□□□ -1.73
CTNND1-207ENST00000426142 KRTAP10-10P60014 251 aa4.22□□□□□ -1.73
CTNND1-207ENST00000426142 LAMA5O15230 3695 aa4.21□□□□□ -1.74
CTNND1-207ENST00000426142 ZFHX4Q86UP3 3567 aa4.21□□□□□ -1.74
CTNND1-207ENST00000426142 TNP1P09430 55 aa4.2□□□□□ -1.74
CTNND1-207ENST00000426142 CELSR1Q9NYQ6 3014 aa4.19□□□□□ -1.74
CTNND1-207ENST00000426142 NBPF19A0A087WUL8 3843 aa4.18□□□□□ -1.74
CTNND1-207ENST00000426142 TENM2Q9NT68 2774 aa4.18□□□□□ -1.74
CTNND1-207ENST00000426142 TENM1Q9UKZ4 2725 aa4.18□□□□□ -1.74
CTNND1-207ENST00000426142 DCHS1Q96JQ0 3298 aa4.16□□□□□ -1.74
CTNND1-207ENST00000426142 DMDP11532 3685 aa4.15□□□□□ -1.75
CTNND1-207ENST00000426142 TPRXLQ17RH7 258 aa4.15□□□□□ -1.75
CTNND1-207ENST00000426142 C10orf95Q9H7T3 257 aa4.14□□□□□ -1.75
CTNND1-207ENST00000426142 KRTAP16-1A8MUX0 517 aa4.12□□□□□ -1.75
CTNND1-207ENST00000426142 PRO2289Q9P1D8 64 aa4.11□□□□□ -1.75
CTNND1-207ENST00000426142 TENM3Q9P273 2699 aa4.11□□□□□ -1.75
CTNND1-207ENST00000426142 MXRA5Q9NR99 2828 aa4.11□□□□□ -1.75
CTNND1-207ENST00000426142 KRTAP13-3Q3SY46 172 aa4.11□□□□□ -1.75
CTNND1-207ENST00000426142 CSMD1Q96PZ7 3565 aa4.1□□□□□ -1.75
CTNND1-207ENST00000426142 NDUFAF8A1L188 74 aa4.1□□□□□ -1.75
CTNND1-207ENST00000426142 PKD1L1Q8TDX9 2849 aa4.08□□□□□ -1.76
CTNND1-207ENST00000426142 H0YAA0 97 aa4.08□□□□□ -1.76
CTNND1-207ENST00000426142 SMG1Q96Q15 3661 aaKnown RBP4.05□□□□□ -1.76
CTNND1-207ENST00000426142 VWFP04275 2813 aa4.05□□□□□ -1.76
CTNND1-207ENST00000426142 PDZD2O15018 2839 aa4.03□□□□□ -1.76
CTNND1-207ENST00000426142 ZFHX3Q15911 3703 aa4.02□□□□□ -1.77
CTNND1-207ENST00000426142 TGP01266 2768 aa4.02□□□□□ -1.77
CTNND1-207ENST00000426142 MUC3AQ02505 3323 aa4□□□□□ -1.77
CTNND1-207ENST00000426142 PP632Q6XCG6 107 aa3.99□□□□□ -1.77
CTNND1-207ENST00000426142 SVEP1Q4LDE5 3571 aa3.98□□□□□ -1.77
CTNND1-207ENST00000426142 ANK3Q12955 4377 aaKnown RBP3.96□□□□□ -1.78
CTNND1-207ENST00000426142 FBN1P35555 2871 aaKnown RBP3.96□□□□□ -1.78
CTNND1-207ENST00000426142 CSMD2Q7Z408 3487 aa3.94□□□□□ -1.78
CTNND1-207ENST00000426142 OTOGQ6ZRI0 2925 aa3.94□□□□□ -1.78
CTNND1-207ENST00000426142 SPENQ96T58 3664 aaKnown RBP3.92□□□□□ -1.78
CTNND1-207ENST00000426142 CUBNO60494 3623 aa3.89□□□□□ -1.79
CTNND1-207ENST00000426142 KRTAP12-2P59991 146 aa3.89□□□□□ -1.79
CTNND1-207ENST00000426142 TRRAPQ9Y4A5 3859 aa3.85□□□□□ -1.79
CTNND1-207ENST00000426142 CRCT1Q9UGL9 99 aa3.83□□□□□ -1.8
CTNND1-207ENST00000426142 BSNQ9UPA5 3926 aa3.82□□□□□ -1.8
CTNND1-207ENST00000426142 KRTAP3-1Q9BYR8 98 aa3.82□□□□□ -1.8
CTNND1-207ENST00000426142 SRRM2Q9UQ35 2752 aaKnown RBP3.79□□□□□ -1.8
CTNND1-207ENST00000426142 KRTAP12-1P59990 96 aa3.78□□□□□ -1.8
CTNND1-207ENST00000426142 FBN3Q75N90 2809 aa3.77□□□□□ -1.81
CTNND1-207ENST00000426142 KRTAP13-4Q3LI77 160 aa3.76□□□□□ -1.81
CTNND1-207ENST00000426142 HUWE1Q7Z6Z7 4374 aaKnown RBP3.75□□□□□ -1.81
CTNND1-207ENST00000426142 VPS13CQ709C8 3753 aa3.73□□□□□ -1.81
CTNND1-207ENST00000426142 MT1HL1P0DM35 61 aa3.72□□□□□ -1.81
CTNND1-207ENST00000426142 MEGF8Q7Z7M0 2845 aa3.72□□□□□ -1.81
CTNND1-207ENST00000426142 KRTAP4-5Q9BYR2 181 aa3.71□□□□□ -1.82
CTNND1-207ENST00000426142 COL7A1Q02388 2944 aa3.69□□□□□ -1.82
CTNND1-207ENST00000426142 KRTAP10-6P60371 365 aaPredicted RBP3.67□□□□□ -1.82
CTNND1-207ENST00000426142 LORP23490 312 aaPredicted RBP3.65□□□□□ -1.83
CTNND1-207ENST00000426142 KRTAP15-1Q3LI76 137 aa3.65□□□□□ -1.83
CTNND1-207ENST00000426142 ALMS1Q8TCU4 4167 aa3.62□□□□□ -1.83
CTNND1-207ENST00000426142 KRTAP10-4P60372 401 aaPredicted RBP3.61□□□□□ -1.83
CTNND1-207ENST00000426142 CSMD3Q7Z407 3707 aa3.59□□□□□ -1.83
CTNND1-207ENST00000426142 KRTAP3-3Q9BYR6 98 aa3.57□□□□□ -1.84
CTNND1-207ENST00000426142 AKAP9Q99996 3911 aa3.55□□□□□ -1.84
CTNND1-207ENST00000426142 ZNF469Q96JG9 3925 aaPredicted RBP3.54□□□□□ -1.84
CTNND1-207ENST00000426142 KRTAP3-2Q9BYR7 98 aa3.54□□□□□ -1.84
CTNND1-207ENST00000426142 DNAH9Q9NYC9 4486 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms