RNA–Protein interactions for RNA: ENST00000421750.1

TRAPPC2P4-201, Transcript of trafficking protein particle complex 2 pseudogene 4, humanhuman

BASIC

Gene TRAPPC2P4, Length 331 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2P4-201ENST00000421750 PKD1L1Q8TDX9 2849 aa0.56□□□□□ -2.32
TRAPPC2P4-201ENST00000421750 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
TRAPPC2P4-201ENST00000421750 DEFB110Q30KQ9 67 aa0.56□□□□□ -2.32
TRAPPC2P4-201ENST00000421750 PRKDCP78527 4128 aaKnown RBP0.56□□□□□ -2.32
TRAPPC2P4-201ENST00000421750 SYNE1Q8NF91 8797 aaKnown RBP0.55□□□□□ -2.32
TRAPPC2P4-201ENST00000421750 MAP1BP46821 2468 aaKnown RBP0.54□□□□□ -2.32
TRAPPC2P4-201ENST00000421750 SETXQ7Z333 2677 aaKnown RBP0.53□□□□□ -2.32
TRAPPC2P4-201ENST00000421750 PDZD2O15018 2839 aa0.53□□□□□ -2.32
TRAPPC2P4-201ENST00000421750 HUWE1Q7Z6Z7 4374 aaKnown RBP0.52□□□□□ -2.33
TRAPPC2P4-201ENST00000421750 SPRR2BP35325 72 aa0.52□□□□□ -2.33
TRAPPC2P4-201ENST00000421750 SRRM2Q9UQ35 2752 aaKnown RBP0.51□□□□□ -2.33
TRAPPC2P4-201ENST00000421750 NSD1Q96L73 2696 aaPredicted RBP0.51□□□□□ -2.33
TRAPPC2P4-201ENST00000421750 LYSTQ99698 3801 aa0.51□□□□□ -2.33
TRAPPC2P4-201ENST00000421750 HIVEP3Q5T1R4 2406 aa0.5□□□□□ -2.33
TRAPPC2P4-201ENST00000421750 TTTY10Q9BZA0 68 aa0.5□□□□□ -2.33
TRAPPC2P4-201ENST00000421750 NF1P21359 2839 aa0.5□□□□□ -2.33
TRAPPC2P4-201ENST00000421750 CACNA1AO00555 2505 aa0.49□□□□□ -2.33
TRAPPC2P4-201ENST00000421750 ACANP16112 2415 aa0.49□□□□□ -2.33
TRAPPC2P4-201ENST00000421750 MYCBP2O75592 4640 aa0.49□□□□□ -2.33
TRAPPC2P4-201ENST00000421750 GCN1Q92616 2671 aaKnown RBP0.49□□□□□ -2.33
TRAPPC2P4-201ENST00000421750 LRP1Q07954 4544 aaKnown RBP0.49□□□□□ -2.33
TRAPPC2P4-201ENST00000421750 SPART-AS1P0CW21 52 aa0.48□□□□□ -2.33
TRAPPC2P4-201ENST00000421750 VPS13BQ7Z7G8 4022 aa0.48□□□□□ -2.33
TRAPPC2P4-201ENST00000421750 KMT2AQ03164 3969 aa0.47□□□□□ -2.33
TRAPPC2P4-201ENST00000421750 STAB1Q9NY15 2570 aa0.47□□□□□ -2.33
TRAPPC2P4-201ENST00000421750 HRNRQ86YZ3 2850 aaPredicted RBP0.47□□□□□ -2.33
TRAPPC2P4-201ENST00000421750 DEFB104AQ8WTQ1 72 aa0.47□□□□□ -2.33
TRAPPC2P4-201ENST00000421750 SPTBN4Q9H254 2564 aa0.46□□□□□ -2.34
TRAPPC2P4-201ENST00000421750 LPAP08519 4548 aa0.46□□□□□ -2.34
TRAPPC2P4-201ENST00000421750 NBASA2RRP1 2371 aa0.46□□□□□ -2.34
TRAPPC2P4-201ENST00000421750 DMXL1Q9Y485 3027 aa0.46□□□□□ -2.34
TRAPPC2P4-201ENST00000421750 KRTAP6-2Q3LI66 62 aa0.45□□□□□ -2.34
TRAPPC2P4-201ENST00000421750 DNAH11Q96DT5 4516 aa0.45□□□□□ -2.34
TRAPPC2P4-201ENST00000421750 SACSQ9NZJ4 4579 aa0.45□□□□□ -2.34
TRAPPC2P4-201ENST00000421750 SETD2Q9BYW2 2564 aaPredicted RBP0.45□□□□□ -2.34
TRAPPC2P4-201ENST00000421750 FLNCQ14315 2725 aa0.44□□□□□ -2.34
TRAPPC2P4-201ENST00000421750 NCOR2Q9Y618 2525 aa0.44□□□□□ -2.34
TRAPPC2P4-201ENST00000421750 CUBNO60494 3623 aa0.44□□□□□ -2.34
TRAPPC2P4-201ENST00000421750 FLNBO75369 2602 aaKnown RBP0.44□□□□□ -2.34
TRAPPC2P4-201ENST00000421750 TACC2O95359 2948 aa0.44□□□□□ -2.34
TRAPPC2P4-201ENST00000421750 WNK1Q9H4A3 2382 aa0.44□□□□□ -2.34
TRAPPC2P4-201ENST00000421750 SPRR2AP35326 72 aa0.44□□□□□ -2.34
TRAPPC2P4-201ENST00000421750 RANBP2P49792 3224 aaKnown RBP0.44□□□□□ -2.34
TRAPPC2P4-201ENST00000421750 TENM3Q9P273 2699 aa0.44□□□□□ -2.34
TRAPPC2P4-201ENST00000421750 PRCDQ00LT1 54 aa0.43□□□□□ -2.34
TRAPPC2P4-201ENST00000421750 ZZEF1O43149 2961 aa0.43□□□□□ -2.34
TRAPPC2P4-201ENST00000421750 APC2O95996 2303 aa0.42□□□□□ -2.34
TRAPPC2P4-201ENST00000421750 PKD1P98161 4303 aa0.42□□□□□ -2.34
TRAPPC2P4-201ENST00000421750 H3BSH0 61 aa0.42□□□□□ -2.34
TRAPPC2P4-201ENST00000421750 LINC01590Q5TEZ4 76 aa0.42□□□□□ -2.34
TRAPPC2P4-201ENST00000421750 COL7A1Q02388 2944 aa0.41□□□□□ -2.34
TRAPPC2P4-201ENST00000421750 COL6A5A8TX70 2615 aa0.4□□□□□ -2.34
TRAPPC2P4-201ENST00000421750 NAV2Q8IVL1 2488 aa0.4□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 MT1AP04731 61 aa0.4□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 KRTAP8-1Q8IUC2 63 aa0.4□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 DMBT1Q9UGM3 2413 aaPredicted RBP0.4□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 MTORP42345 2549 aa0.4□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 HSPG2P98160 4391 aa0.4□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 SONP18583 2426 aaKnown RBP0.39□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 ANKRD11Q6UB99 2663 aaPredicted RBP0.39□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 ANK3Q12955 4377 aaKnown RBP0.39□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 UTP20O75691 2785 aaKnown RBP0.39□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 CRYBG3Q68DQ2 2970 aa0.39□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 TRIOO75962 3097 aa0.39□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 HECTD4Q9Y4D8 3996 aa0.38□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 USP24Q9UPU5 2620 aa0.38□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 CHD7Q9P2D1 2997 aa0.38□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 AHNAKQ09666 5890 aaKnown RBP0.38□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 KALRNO60229 2985 aa0.38□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 DNAH3Q8TD57 4116 aa0.38□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 COL6A3P12111 3177 aa0.37□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 ANKHD1Q8IWZ3 2542 aaKnown RBP0.37□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 MUC5BQ9HC84 5762 aaPredicted RBP0.37□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 DCHS2Q6V1P9 2916 aa0.36□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 FAT4Q6V0I7 4981 aa0.36□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 SPRR2EP22531 72 aa0.36□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 PKHD1L1Q86WI1 4243 aa0.36□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 HTTP42858 3142 aa0.36□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 SPENQ96T58 3664 aaKnown RBP0.36□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 ACACAQ13085 2346 aa0.36□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 DNAH2Q9P225 4427 aa0.35□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 SPRR2FQ96RM1 72 aa0.35□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 IGSF10Q6WRI0 2623 aa0.34□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 TENM2Q9NT68 2774 aa0.34□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 APOBP04114 4563 aaKnown RBP0.34□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 LRP1BQ9NZR2 4599 aa0.34□□□□□ -2.35
TRAPPC2P4-201ENST00000421750 DNAH9Q9NYC9 4486 aa0.34□□□□□ -2.36
TRAPPC2P4-201ENST00000421750 ZANQ9Y493 2812 aa0.33□□□□□ -2.36
TRAPPC2P4-201ENST00000421750 FRYQ5TBA9 3013 aa0.33□□□□□ -2.36
TRAPPC2P4-201ENST00000421750 VPS13DQ5THJ4 4388 aa0.33□□□□□ -2.36
TRAPPC2P4-201ENST00000421750 K7EIM0 57 aa0.33□□□□□ -2.36
TRAPPC2P4-201ENST00000421750 LRRK2Q5S007 2527 aa0.33□□□□□ -2.36
TRAPPC2P4-201ENST00000421750 COL12A1Q99715 3063 aa0.32□□□□□ -2.36
TRAPPC2P4-201ENST00000421750 SMR3BP02814 79 aaPredicted RBP0.32□□□□□ -2.36
TRAPPC2P4-201ENST00000421750 ACACBO00763 2458 aa0.32□□□□□ -2.36
TRAPPC2P4-201ENST00000421750 RIF1Q5UIP0 2472 aaKnown RBP0.32□□□□□ -2.36
TRAPPC2P4-201ENST00000421750 PKHD1P08F94 4074 aa0.32□□□□□ -2.36
TRAPPC2P4-201ENST00000421750 SVEP1Q4LDE5 3571 aa0.32□□□□□ -2.36
TRAPPC2P4-201ENST00000421750 NBEAL2Q6ZNJ1 2754 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms