RNA–Protein interactions for RNA: ENST00000421750.1

TRAPPC2P4-201, Transcript of trafficking protein particle complex 2 pseudogene 4, humanhuman

BASIC

Gene TRAPPC2P4, Length 331 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2P4-201ENST00000421750 AEBP2Q6ZN18 517 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC2P4-201ENST00000421750 CHIC1Q5VXU3 224 aa16.1■□□□□ 0.17
TRAPPC2P4-201ENST00000421750 SENP3Q9H4L4 574 aaPredicted RBP14.8□□□□□ -0.04
TRAPPC2P4-201ENST00000421750 PHF23Q9BUL5 403 aaPredicted RBP14.5□□□□□ -0.09
TRAPPC2P4-201ENST00000421750 FOXD1Q16676 465 aa13.82□□□□□ -0.2
TRAPPC2P4-201ENST00000421750 POTEDQ86YR6 584 aa13.75□□□□□ -0.21
TRAPPC2P4-201ENST00000421750 MSH5O43196 834 aa13.19□□□□□ -0.3
TRAPPC2P4-201ENST00000421750 PIAS4Q8N2W9 510 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC2P4-201ENST00000421750 PPP6R1Q9UPN7 881 aa12.49□□□□□ -0.41
TRAPPC2P4-201ENST00000421750 PLPPR3Q6T4P5 718 aa12.42□□□□□ -0.42
TRAPPC2P4-201ENST00000421750 ADRA2BP18089 450 aa12.39□□□□□ -0.43
TRAPPC2P4-201ENST00000421750 DMRT2Q9Y5R5 561 aa11.65□□□□□ -0.54
TRAPPC2P4-201ENST00000421750 CACNB1Q02641 598 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC2P4-201ENST00000421750 MAPK8IP2Q13387 824 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC2P4-201ENST00000421750 SCAF1Q9H7N4 1312 aaKnown RBP11.41□□□□□ -0.58
TRAPPC2P4-201ENST00000421750 RNF39Q9H2S5 420 aa11.2□□□□□ -0.62
TRAPPC2P4-201ENST00000421750 DCAF8L1A6NGE4 600 aa11.07□□□□□ -0.64
TRAPPC2P4-201ENST00000421750 HOXD11P31277 338 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC2P4-201ENST00000421750 C1QBPQ07021 282 aaKnown RBP11.02□□□□□ -0.65
TRAPPC2P4-201ENST00000421750 DNAJC5BQ9UF47 199 aa10.86□□□□□ -0.67
TRAPPC2P4-201ENST00000421750 RNF216Q9NWF9 866 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC2P4-201ENST00000421750 PPP4R3CPQ6ZMV5 832 aa10.78□□□□□ -0.68
TRAPPC2P4-201ENST00000421750 CNKSR2Q8WXI2 1034 aa10.74□□□□□ -0.69
TRAPPC2P4-201ENST00000421750 POTEHQ6S545 545 aa10.67□□□□□ -0.7
TRAPPC2P4-201ENST00000421750 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.42□□□□□ -0.74
TRAPPC2P4-201ENST00000421750 DSG3P32926 999 aa10.29□□□□□ -0.76
TRAPPC2P4-201ENST00000421750 NCBP3Q53F19 620 aaKnown RBP10.22□□□□□ -0.77
TRAPPC2P4-201ENST00000421750 U3KPZ7 1027 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC2P4-201ENST00000421750 SPINK5Q9NQ38 1064 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC2P4-201ENST00000421750 CAPN15O75808 1086 aa10.15□□□□□ -0.78
TRAPPC2P4-201ENST00000421750 NPM3O75607 178 aaKnown RBP10.06□□□□□ -0.8
TRAPPC2P4-201ENST00000421750 ZNF219Q9P2Y4 722 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC2P4-201ENST00000421750 APLP2Q06481 763 aa9.88□□□□□ -0.83
TRAPPC2P4-201ENST00000421750 RBM42Q9BTD8 480 aaKnown RBP9.86□□□□□ -0.83
TRAPPC2P4-201ENST00000421750 TRHP20396 242 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC2P4-201ENST00000421750 ABCB7O75027 752 aa9.84□□□□□ -0.83
TRAPPC2P4-201ENST00000421750 CHRDL2Q6WN34 429 aa9.81□□□□□ -0.84
TRAPPC2P4-201ENST00000421750 SP7Q8TDD2 431 aaPredicted RBP9.76□□□□□ -0.85
TRAPPC2P4-201ENST00000421750 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC2P4-201ENST00000421750 SLC4A2P04920 1241 aa9.75□□□□□ -0.85
TRAPPC2P4-201ENST00000421750 HNRNPUL2Q1KMD3 747 aaKnown RBP9.75□□□□□ -0.85
TRAPPC2P4-201ENST00000421750 SAMD1Q6SPF0 538 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC2P4-201ENST00000421750 AKT1S1Q96B36 256 aa9.51□□□□□ -0.89
TRAPPC2P4-201ENST00000421750 POLA2Q14181 598 aa9.49□□□□□ -0.89
TRAPPC2P4-201ENST00000421750 PIP4P2Q8N4L2 257 aa9.46□□□□□ -0.9
TRAPPC2P4-201ENST00000421750 HAX1O00165 279 aa9.4□□□□□ -0.9
TRAPPC2P4-201ENST00000421750 REM2Q8IYK8 340 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC2P4-201ENST00000421750 FXR2P51116 673 aaKnown RBP eCLIP9.36□□□□□ -0.91
TRAPPC2P4-201ENST00000421750 KCNA4P22459 653 aa9.35□□□□□ -0.91
TRAPPC2P4-201ENST00000421750 MYCNP04198 464 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC2P4-201ENST00000421750 ZBTB12Q9Y330 459 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC2P4-201ENST00000421750 PITPNM1O00562 1244 aa9.28□□□□□ -0.92
TRAPPC2P4-201ENST00000421750 EVX2Q03828 476 aa9.25□□□□□ -0.93
TRAPPC2P4-201ENST00000421750 OSCARQ8IYS5 282 aa9.21□□□□□ -0.94
TRAPPC2P4-201ENST00000421750 LHX8Q68G74 356 aa9.13□□□□□ -0.95
TRAPPC2P4-201ENST00000421750 ATF5Q9Y2D1 282 aaPredicted RBP9.11□□□□□ -0.95
TRAPPC2P4-201ENST00000421750 C19orf67A6NJJ6 358 aa9.07□□□□□ -0.96
TRAPPC2P4-201ENST00000421750 GABBR2O75899 941 aa9.05□□□□□ -0.96
TRAPPC2P4-201ENST00000421750 PRKAR2AP13861 404 aaKnown RBP9.02□□□□□ -0.97
TRAPPC2P4-201ENST00000421750 SPDYE2BA6NHP3 402 aa8.98□□□□□ -0.97
TRAPPC2P4-201ENST00000421750 SPDYE6P0CI01 402 aa8.98□□□□□ -0.97
TRAPPC2P4-201ENST00000421750 SPDYE2Q495Y8 402 aa8.98□□□□□ -0.97
TRAPPC2P4-201ENST00000421750 SPDYE1Q8NFV5 336 aaPredicted RBP8.94□□□□□ -0.98
TRAPPC2P4-201ENST00000421750 FOXD4L1Q9NU39 408 aa8.94□□□□□ -0.98
TRAPPC2P4-201ENST00000421750 PLSCR2Q9NRY7 297 aa8.91□□□□□ -0.98
TRAPPC2P4-201ENST00000421750 CLEC11AQ9Y240 323 aa8.88□□□□□ -0.99
TRAPPC2P4-201ENST00000421750 POTEIP0CG38 1075 aa8.85□□□□□ -0.99
TRAPPC2P4-201ENST00000421750 CLCN6P51797 869 aa8.83□□□□□ -1
TRAPPC2P4-201ENST00000421750 FBLN2P98095 1184 aa8.82□□□□□ -1
TRAPPC2P4-201ENST00000421750 SSUH2Q9Y2M2 353 aa8.81□□□□□ -1
TRAPPC2P4-201ENST00000421750 CHADLQ6NUI6 762 aa8.78□□□□□ -1
TRAPPC2P4-201ENST00000421750 ATXN8OSP0DMR3 200 aa8.77□□□□□ -1.01
TRAPPC2P4-201ENST00000421750 ZNF692Q9BU19 519 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC2P4-201ENST00000421750 SLC4A1APQ9BWU0 796 aaKnown RBP8.72□□□□□ -1.01
TRAPPC2P4-201ENST00000421750 CD44P16070 742 aaKnown RBP8.71□□□□□ -1.02
TRAPPC2P4-201ENST00000421750 PRR29P0C7W0 189 aa8.7□□□□□ -1.02
TRAPPC2P4-201ENST00000421750 MKRN4PQ13434 485 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC2P4-201ENST00000421750 DCBLD2Q96PD2 775 aa8.66□□□□□ -1.02
TRAPPC2P4-201ENST00000421750 FARP1Q9Y4F1 1045 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC2P4-201ENST00000421750 OTUD5Q96G74 571 aa8.63□□□□□ -1.03
TRAPPC2P4-201ENST00000421750 POTEMA6NI47 508 aa8.62□□□□□ -1.03
TRAPPC2P4-201ENST00000421750 ZNF579Q8NAF0 562 aaKnown RBP8.6□□□□□ -1.03
TRAPPC2P4-201ENST00000421750 ZBTB22O15209 634 aa8.59□□□□□ -1.03
TRAPPC2P4-201ENST00000421750 PCDH10Q9P2E7 1040 aa8.59□□□□□ -1.03
TRAPPC2P4-201ENST00000421750 PABPN1Q86U42 306 aaKnown RBP eCLIP8.58□□□□□ -1.04
TRAPPC2P4-201ENST00000421750 POTEGQ6S5H5 508 aa8.56□□□□□ -1.04
TRAPPC2P4-201ENST00000421750 POTEB2H3BUK9 544 aa8.53□□□□□ -1.04
TRAPPC2P4-201ENST00000421750 ZRANB1Q9UGI0 708 aa8.49□□□□□ -1.05
TRAPPC2P4-201ENST00000421750 GALR2O43603 387 aaPredicted RBP8.48□□□□□ -1.05
TRAPPC2P4-201ENST00000421750 CREBZFQ9NS37 354 aa8.38□□□□□ -1.07
TRAPPC2P4-201ENST00000421750 PELP1Q8IZL8 1130 aaKnown RBP8.37□□□□□ -1.07
TRAPPC2P4-201ENST00000421750 LCE2DQ5TA82 110 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC2P4-201ENST00000421750 MAMSTRQ6ZN01 415 aa8.35□□□□□ -1.07
TRAPPC2P4-201ENST00000421750 POTEJP0CG39 1038 aa8.33□□□□□ -1.08
TRAPPC2P4-201ENST00000421750 ASTLQ6HA08 431 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC2P4-201ENST00000421750 PAK3O75914 559 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC2P4-201ENST00000421750 C7P10643 843 aa8.31□□□□□ -1.08
TRAPPC2P4-201ENST00000421750 SLC39A7Q92504 469 aa8.31□□□□□ -1.08
TRAPPC2P4-201ENST00000421750 PHF12Q96QT6 1004 aa8.31□□□□□ -1.08
TRAPPC2P4-201ENST00000421750 METRNQ9UJH8 293 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms