RNA–Protein interactions for RNA: ENST00000421182.5

FN1-207, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-207ENST00000421182 KRTAP1-5Q9BYS1 174 aa6.66□□□□□ -1.34
FN1-207ENST00000421182 Q6ZR54 194 aa6.64□□□□□ -1.35
FN1-207ENST00000421182 KRTAP10-2P60368 255 aa6.64□□□□□ -1.35
FN1-207ENST00000421182 HRNRQ86YZ3 2850 aaPredicted RBP6.63□□□□□ -1.35
FN1-207ENST00000421182 LINC01558Q9Y6Z2 57 aa6.63□□□□□ -1.35
FN1-207ENST00000421182 ZFHX3Q15911 3703 aa6.63□□□□□ -1.35
FN1-207ENST00000421182 FBN2P35556 2912 aa6.63□□□□□ -1.35
FN1-207ENST00000421182 DMDP11532 3685 aa6.62□□□□□ -1.35
FN1-207ENST00000421182 KRTAP26-1Q6PEX3 210 aa6.62□□□□□ -1.35
FN1-207ENST00000421182 ASB16-AS1Q495Z4 193 aa6.6□□□□□ -1.35
FN1-207ENST00000421182 Q8N9P0 234 aaPredicted RBP6.59□□□□□ -1.35
FN1-207ENST00000421182 RPL37P61927 97 aaKnown RBP6.57□□□□□ -1.36
FN1-207ENST00000421182 M0QZ58 72 aa6.56□□□□□ -1.36
FN1-207ENST00000421182 SPENQ96T58 3664 aaKnown RBP6.55□□□□□ -1.36
FN1-207ENST00000421182 Q8NDZ9 215 aa6.54□□□□□ -1.36
FN1-207ENST00000421182 KRTAP4-16G5E9R7 235 aaPredicted RBP6.51□□□□□ -1.37
FN1-207ENST00000421182 H1FX-AS1Q4G0G2 97 aa6.51□□□□□ -1.37
FN1-207ENST00000421182 ROMO1P60602 79 aa6.5□□□□□ -1.37
FN1-207ENST00000421182 PANO1I0J062 215 aa6.49□□□□□ -1.37
FN1-207ENST00000421182 A0A0A0MQY5 61 aa6.48□□□□□ -1.37
FN1-207ENST00000421182 ADM2Q7Z4H4 148 aa6.48□□□□□ -1.37
FN1-207ENST00000421182 Q5XG85 94 aa6.48□□□□□ -1.37
FN1-207ENST00000421182 MXRA5Q9NR99 2828 aa6.48□□□□□ -1.37
FN1-207ENST00000421182 DCHS1Q96JQ0 3298 aa6.46□□□□□ -1.38
FN1-207ENST00000421182 A0A087X002 238 aa6.46□□□□□ -1.38
FN1-207ENST00000421182 RELNP78509 3460 aa6.46□□□□□ -1.38
FN1-207ENST00000421182 TENM3Q9P273 2699 aa6.43□□□□□ -1.38
FN1-207ENST00000421182 Q6ZRN7 208 aaPredicted RBP6.41□□□□□ -1.38
FN1-207ENST00000421182 MUC3AQ02505 3323 aa6.41□□□□□ -1.38
FN1-207ENST00000421182 Q5VV11 94 aa6.4□□□□□ -1.38
FN1-207ENST00000421182 PKD1L1Q8TDX9 2849 aa6.4□□□□□ -1.38
FN1-207ENST00000421182 TGP01266 2768 aa6.38□□□□□ -1.39
FN1-207ENST00000421182 ZFHX4Q86UP3 3567 aa6.37□□□□□ -1.39
FN1-207ENST00000421182 A8MUU9 505 aa6.35□□□□□ -1.39
FN1-207ENST00000421182 KRTAP29-1A8MX34 341 aaPredicted RBP6.34□□□□□ -1.39
FN1-207ENST00000421182 BSNQ9UPA5 3926 aa6.34□□□□□ -1.39
FN1-207ENST00000421182 TENM2Q9NT68 2774 aa6.33□□□□□ -1.4
FN1-207ENST00000421182 PDZD2O15018 2839 aa6.33□□□□□ -1.4
FN1-207ENST00000421182 VWFP04275 2813 aa6.31□□□□□ -1.4
FN1-207ENST00000421182 C20orf166-AS1Q96NR2 134 aa6.31□□□□□ -1.4
FN1-207ENST00000421182 SMG1Q96Q15 3661 aaKnown RBP6.31□□□□□ -1.4
FN1-207ENST00000421182 NOTCH2NLQ7Z3S9 236 aa6.25□□□□□ -1.41
FN1-207ENST00000421182 KRTAP13-1Q8IUC0 172 aa6.25□□□□□ -1.41
FN1-207ENST00000421182 CSMD1Q96PZ7 3565 aa6.25□□□□□ -1.41
FN1-207ENST00000421182 COL7A1Q02388 2944 aa6.23□□□□□ -1.41
FN1-207ENST00000421182 SPATA8Q6RVD6 105 aa6.22□□□□□ -1.41
FN1-207ENST00000421182 KRTAP13-2Q52LG2 175 aa6.21□□□□□ -1.42
FN1-207ENST00000421182 TNP1P09430 55 aa6.19□□□□□ -1.42
FN1-207ENST00000421182 CYSTM1Q9H1C7 97 aa6.18□□□□□ -1.42
FN1-207ENST00000421182 KRTAP11-1Q8IUC1 163 aa6.17□□□□□ -1.42
FN1-207ENST00000421182 PRAC1Q96KF2 57 aa6.16□□□□□ -1.42
FN1-207ENST00000421182 VPS13CQ709C8 3753 aa6.15□□□□□ -1.42
FN1-207ENST00000421182 TRRAPQ9Y4A5 3859 aa6.13□□□□□ -1.43
FN1-207ENST00000421182 TPRXLQ17RH7 258 aa6.12□□□□□ -1.43
FN1-207ENST00000421182 KRTAP7-1Q8IUC3 87 aa6.09□□□□□ -1.43
FN1-207ENST00000421182 PRO2289Q9P1D8 64 aa6.08□□□□□ -1.44
FN1-207ENST00000421182 PP632Q6XCG6 107 aa6.08□□□□□ -1.44
FN1-207ENST00000421182 FBN1P35555 2871 aaKnown RBP6.06□□□□□ -1.44
FN1-207ENST00000421182 SVEP1Q4LDE5 3571 aa6.05□□□□□ -1.44
FN1-207ENST00000421182 AKAP9Q99996 3911 aa6.04□□□□□ -1.44
FN1-207ENST00000421182 KRTAP25-1Q3LHN0 102 aa6.02□□□□□ -1.45
FN1-207ENST00000421182 XP32Q5T750 250 aa6.01□□□□□ -1.45
FN1-207ENST00000421182 H3BS24 57 aa5.97□□□□□ -1.45
FN1-207ENST00000421182 A8MU10 97 aa5.95□□□□□ -1.46
FN1-207ENST00000421182 KRTAP10-8P60410 259 aa5.95□□□□□ -1.46
FN1-207ENST00000421182 KRTAP1-4P0C5Y4 121 aa5.94□□□□□ -1.46
FN1-207ENST00000421182 OTOGQ6ZRI0 2925 aa5.92□□□□□ -1.46
FN1-207ENST00000421182 ZNF469Q96JG9 3925 aaPredicted RBP5.91□□□□□ -1.46
FN1-207ENST00000421182 CSMD2Q7Z408 3487 aa5.91□□□□□ -1.46
FN1-207ENST00000421182 CUBNO60494 3623 aa5.91□□□□□ -1.46
FN1-207ENST00000421182 KRTAP16-1A8MUX0 517 aa5.91□□□□□ -1.46
FN1-207ENST00000421182 KRTAP10-10P60014 251 aa5.88□□□□□ -1.47
FN1-207ENST00000421182 A6NN06 94 aa5.88□□□□□ -1.47
FN1-207ENST00000421182 SRRM2Q9UQ35 2752 aaKnown RBP5.86□□□□□ -1.47
FN1-207ENST00000421182 C10orf95Q9H7T3 257 aa5.85□□□□□ -1.47
FN1-207ENST00000421182 KRTAP13-3Q3SY46 172 aa5.84□□□□□ -1.48
FN1-207ENST00000421182 MEGF8Q7Z7M0 2845 aa5.82□□□□□ -1.48
FN1-207ENST00000421182 A0A1B0GVY2 172 aa5.77□□□□□ -1.49
FN1-207ENST00000421182 FBN3Q75N90 2809 aa5.73□□□□□ -1.49
FN1-207ENST00000421182 NDUFAF8A1L188 74 aa5.69□□□□□ -1.5
FN1-207ENST00000421182 H0YAA0 97 aa5.65□□□□□ -1.5
FN1-207ENST00000421182 ANK3Q12955 4377 aaKnown RBP5.62□□□□□ -1.51
FN1-207ENST00000421182 P0C880 135 aa5.61□□□□□ -1.51
FN1-207ENST00000421182 CSMD3Q7Z407 3707 aa5.6□□□□□ -1.51
FN1-207ENST00000421182 ALMS1Q8TCU4 4167 aa5.49□□□□□ -1.53
FN1-207ENST00000421182 KRTAP13-4Q3LI77 160 aa5.45□□□□□ -1.54
FN1-207ENST00000421182 CMYA5Q8N3K9 4069 aa5.39□□□□□ -1.55
FN1-207ENST00000421182 LYSTQ99698 3801 aa5.38□□□□□ -1.55
FN1-207ENST00000421182 HUWE1Q7Z6Z7 4374 aaKnown RBP5.36□□□□□ -1.55
FN1-207ENST00000421182 DNAH1Q9P2D7 4330 aa5.35□□□□□ -1.55
FN1-207ENST00000421182 KRTAP12-2P59991 146 aa5.32□□□□□ -1.56
FN1-207ENST00000421182 DNAH7Q8WXX0 4024 aa5.31□□□□□ -1.56
FN1-207ENST00000421182 KMT2AQ03164 3969 aa5.29□□□□□ -1.56
FN1-207ENST00000421182 DNAH3Q8TD57 4116 aa5.29□□□□□ -1.56
FN1-207ENST00000421182 KRTAP12-1P59990 96 aa5.27□□□□□ -1.57
FN1-207ENST00000421182 ANK2Q01484 3957 aa5.27□□□□□ -1.57
FN1-207ENST00000421182 KRTAP15-1Q3LI76 137 aa5.23□□□□□ -1.57
FN1-207ENST00000421182 HECTD4Q9Y4D8 3996 aa5.15□□□□□ -1.58
FN1-207ENST00000421182 VPS13BQ7Z7G8 4022 aa5.14□□□□□ -1.59
FN1-207ENST00000421182 MT1HL1P0DM35 61 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms