RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 KRTAP10-10P60014 251 aa1.47□□□□□ -2.17
SF3B1-203ENST00000414174 ZNF462Q96JM2 2506 aa1.47□□□□□ -2.17
SF3B1-203ENST00000414174 ROS1P08922 2347 aa1.46□□□□□ -2.18
SF3B1-203ENST00000414174 PTPN13Q12923 2485 aa1.46□□□□□ -2.18
SF3B1-203ENST00000414174 PKDREJQ9NTG1 2253 aa1.46□□□□□ -2.18
SF3B1-203ENST00000414174 ASPMQ8IZT6 3477 aa1.46□□□□□ -2.18
SF3B1-203ENST00000414174 USP9XQ93008 2570 aaPredicted RBP1.46□□□□□ -2.18
SF3B1-203ENST00000414174 TRIOO75962 3097 aa1.46□□□□□ -2.18
SF3B1-203ENST00000414174 GCN1Q92616 2671 aaKnown RBP1.45□□□□□ -2.18
SF3B1-203ENST00000414174 A0A0D9SG42 100 aa1.45□□□□□ -2.18
SF3B1-203ENST00000414174 CD52P31358 61 aa1.45□□□□□ -2.18
SF3B1-203ENST00000414174 KRTAP6-3Q3LI67 103 aa1.45□□□□□ -2.18
SF3B1-203ENST00000414174 SPEGQ15772 3267 aa1.45□□□□□ -2.18
SF3B1-203ENST00000414174 ACACAQ13085 2346 aa1.45□□□□□ -2.18
SF3B1-203ENST00000414174 VPS13AQ96RL7 3174 aa1.45□□□□□ -2.18
SF3B1-203ENST00000414174 MYO18BQ8IUG5 2567 aa1.44□□□□□ -2.18
SF3B1-203ENST00000414174 DEFB124Q8NES8 71 aa1.44□□□□□ -2.18
SF3B1-203ENST00000414174 SMG1Q96Q15 3661 aaKnown RBP1.44□□□□□ -2.18
SF3B1-203ENST00000414174 ZZEF1O43149 2961 aa1.43□□□□□ -2.18
SF3B1-203ENST00000414174 APC2O95996 2303 aa1.43□□□□□ -2.18
SF3B1-203ENST00000414174 IGSF10Q6WRI0 2623 aa1.43□□□□□ -2.18
SF3B1-203ENST00000414174 CEP295Q9C0D2 2601 aa1.43□□□□□ -2.18
SF3B1-203ENST00000414174 C2CD3Q4AC94 2353 aa1.42□□□□□ -2.18
SF3B1-203ENST00000414174 DOPEY1Q5JWR5 2465 aa1.42□□□□□ -2.18
SF3B1-203ENST00000414174 M0QZ58 72 aa1.42□□□□□ -2.18
SF3B1-203ENST00000414174 MYO9AB2RTY4 2548 aa1.42□□□□□ -2.18
SF3B1-203ENST00000414174 SPTAN1Q13813 2472 aaKnown RBP1.42□□□□□ -2.18
SF3B1-203ENST00000414174 WDR87Q6ZQQ6 2873 aa1.41□□□□□ -2.18
SF3B1-203ENST00000414174 HIVEP2P31629 2446 aa1.41□□□□□ -2.18
SF3B1-203ENST00000414174 CREBBPQ92793 2442 aa1.41□□□□□ -2.18
SF3B1-203ENST00000414174 ABCA2Q9BZC7 2435 aa1.41□□□□□ -2.18
SF3B1-203ENST00000414174 DMXL2Q8TDJ6 3036 aa1.41□□□□□ -2.18
SF3B1-203ENST00000414174 TEP1Q99973 2627 aaKnown RBP1.41□□□□□ -2.18
SF3B1-203ENST00000414174 HECTD1Q9ULT8 2610 aa1.41□□□□□ -2.18
SF3B1-203ENST00000414174 FRYQ5TBA9 3013 aa1.41□□□□□ -2.18
SF3B1-203ENST00000414174 LOC400499M0QZD8 3231 aa1.4□□□□□ -2.18
SF3B1-203ENST00000414174 HTN1P15515 57 aa1.4□□□□□ -2.19
SF3B1-203ENST00000414174 DEFB110Q30KQ9 67 aa1.4□□□□□ -2.19
SF3B1-203ENST00000414174 DEFB108BQ8NET1 73 aa1.4□□□□□ -2.19
SF3B1-203ENST00000414174 HMCN1Q96RW7 5635 aa1.4□□□□□ -2.19
SF3B1-203ENST00000414174 SPTBN1Q01082 2364 aaKnown RBP1.4□□□□□ -2.19
SF3B1-203ENST00000414174 AKAP6Q13023 2319 aa1.39□□□□□ -2.19
SF3B1-203ENST00000414174 DSPP15924 2871 aaKnown RBP1.39□□□□□ -2.19
SF3B1-203ENST00000414174 ABCA12Q86UK0 2595 aa1.39□□□□□ -2.19
SF3B1-203ENST00000414174 KRTAP12-4P60329 112 aa1.39□□□□□ -2.19
SF3B1-203ENST00000414174 ITPR1Q14643 2758 aa1.39□□□□□ -2.19
SF3B1-203ENST00000414174 CSPG4Q6UVK1 2322 aa1.39□□□□□ -2.19
SF3B1-203ENST00000414174 FBN3Q75N90 2809 aa1.39□□□□□ -2.19
SF3B1-203ENST00000414174 UBR5O95071 2799 aaPredicted RBP1.38□□□□□ -2.19
SF3B1-203ENST00000414174 FRYLO94915 3013 aa1.38□□□□□ -2.19
SF3B1-203ENST00000414174 FBN2P35556 2912 aa1.38□□□□□ -2.19
SF3B1-203ENST00000414174 FREM2Q5SZK8 3169 aa1.38□□□□□ -2.19
SF3B1-203ENST00000414174 LAMA5O15230 3695 aa1.38□□□□□ -2.19
SF3B1-203ENST00000414174 CFAP46Q8IYW2 2715 aa1.38□□□□□ -2.19
SF3B1-203ENST00000414174 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
SF3B1-203ENST00000414174 KRTAP13-1Q8IUC0 172 aa1.38□□□□□ -2.19
SF3B1-203ENST00000414174 TENM4Q6N022 2769 aa1.38□□□□□ -2.19
SF3B1-203ENST00000414174 TEX15Q9BXT5 2789 aa1.37□□□□□ -2.19
SF3B1-203ENST00000414174 USP9YO00507 2555 aaPredicted RBP1.37□□□□□ -2.19
SF3B1-203ENST00000414174 F8P00451 2351 aa1.37□□□□□ -2.19
SF3B1-203ENST00000414174 NBEAQ8NFP9 2946 aa1.37□□□□□ -2.19
SF3B1-203ENST00000414174 AKAP13Q12802 2813 aa1.37□□□□□ -2.19
SF3B1-203ENST00000414174 KALRNO60229 2985 aa1.37□□□□□ -2.19
SF3B1-203ENST00000414174 WDFY3Q8IZQ1 3526 aa1.36□□□□□ -2.19
SF3B1-203ENST00000414174 LRRK2Q5S007 2527 aa1.36□□□□□ -2.19
SF3B1-203ENST00000414174 CELSR3Q9NYQ7 3312 aa1.35□□□□□ -2.19
SF3B1-203ENST00000414174 DNHD1Q96M86 4753 aa1.35□□□□□ -2.19
SF3B1-203ENST00000414174 SPG11Q96JI7 2443 aa1.35□□□□□ -2.19
SF3B1-203ENST00000414174 NBPF19A0A087WUL8 3843 aa1.34□□□□□ -2.19
SF3B1-203ENST00000414174 DEFB136Q30KP8 78 aa1.34□□□□□ -2.19
SF3B1-203ENST00000414174 ITPR3Q14573 2671 aa1.34□□□□□ -2.2
SF3B1-203ENST00000414174 TLN1Q9Y490 2541 aaKnown RBP1.34□□□□□ -2.2
SF3B1-203ENST00000414174 POLQO75417 2590 aa1.34□□□□□ -2.2
SF3B1-203ENST00000414174 HIVEP3Q5T1R4 2406 aa1.34□□□□□ -2.2
SF3B1-203ENST00000414174 CELSR2Q9HCU4 2923 aa1.33□□□□□ -2.2
SF3B1-203ENST00000414174 NBASA2RRP1 2371 aa1.33□□□□□ -2.2
SF3B1-203ENST00000414174 U3KQA8 63 aa1.33□□□□□ -2.2
SF3B1-203ENST00000414174 ITPR2Q14571 2701 aa1.33□□□□□ -2.2
SF3B1-203ENST00000414174 MTORP42345 2549 aa1.33□□□□□ -2.2
SF3B1-203ENST00000414174 MGAQ8IWI9 3026 aa1.33□□□□□ -2.2
SF3B1-203ENST00000414174 RELNP78509 3460 aa1.32□□□□□ -2.2
SF3B1-203ENST00000414174 ATMQ13315 3056 aa1.32□□□□□ -2.2
SF3B1-203ENST00000414174 BSNQ9UPA5 3926 aa1.32□□□□□ -2.2
SF3B1-203ENST00000414174 OTOGQ6ZRI0 2925 aa1.32□□□□□ -2.2
SF3B1-203ENST00000414174 HIVEP1P15822 2718 aa1.31□□□□□ -2.2
SF3B1-203ENST00000414174 LAMA1P25391 3075 aa1.31□□□□□ -2.2
SF3B1-203ENST00000414174 COL12A1Q99715 3063 aa1.31□□□□□ -2.2
SF3B1-203ENST00000414174 ANKHD1Q8IWZ3 2542 aaKnown RBP1.31□□□□□ -2.2
SF3B1-203ENST00000414174 SETD2Q9BYW2 2564 aaPredicted RBP1.31□□□□□ -2.2
SF3B1-203ENST00000414174 FLNCQ14315 2725 aa1.31□□□□□ -2.2
SF3B1-203ENST00000414174 TENM2Q9NT68 2774 aa1.3□□□□□ -2.2
SF3B1-203ENST00000414174 FBN1P35555 2871 aaKnown RBP1.3□□□□□ -2.2
SF3B1-203ENST00000414174 PDZD2O15018 2839 aa1.3□□□□□ -2.2
SF3B1-203ENST00000414174 NF1P21359 2839 aa1.3□□□□□ -2.2
SF3B1-203ENST00000414174 CSMD1Q96PZ7 3565 aa1.3□□□□□ -2.2
SF3B1-203ENST00000414174 A0A096LNI7 61 aa1.29□□□□□ -2.2
SF3B1-203ENST00000414174 SPINK6Q6UWN8 80 aa1.29□□□□□ -2.2
SF3B1-203ENST00000414174 MEGF8Q7Z7M0 2845 aa1.29□□□□□ -2.2
SF3B1-203ENST00000414174 ADGRG4Q8IZF6 3080 aa1.29□□□□□ -2.2
SF3B1-203ENST00000414174 SPENQ96T58 3664 aaKnown RBP1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms