RNA–Protein interactions for RNA: ENST00000411975.5

ABCA13-201, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 4,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-201ENST00000411975 LINC01558Q9Y6Z2 57 aa7.04□□□□□ -1.28
ABCA13-201ENST00000411975 Q75L30 129 aa7.03□□□□□ -1.28
ABCA13-201ENST00000411975 RBM12B-AS1Q9P1G2 102 aa7.03□□□□□ -1.28
ABCA13-201ENST00000411975 PDZD2O15018 2839 aa7.03□□□□□ -1.28
ABCA13-201ENST00000411975 KRTAP13-1Q8IUC0 172 aa7.02□□□□□ -1.29
ABCA13-201ENST00000411975 COX6B2Q6YFQ2 88 aa7.02□□□□□ -1.29
ABCA13-201ENST00000411975 KTN1-AS1Q86SY8 53 aa6.99□□□□□ -1.29
ABCA13-201ENST00000411975 SMG1Q96Q15 3661 aaKnown RBP6.98□□□□□ -1.29
ABCA13-201ENST00000411975 NOTCH2NLQ7Z3S9 236 aa6.97□□□□□ -1.29
ABCA13-201ENST00000411975 Q5VV11 94 aa6.97□□□□□ -1.29
ABCA13-201ENST00000411975 VWFP04275 2813 aa6.96□□□□□ -1.29
ABCA13-201ENST00000411975 SPINK7P58062 85 aa6.96□□□□□ -1.29
ABCA13-201ENST00000411975 Q6ZSA8 131 aa6.96□□□□□ -1.3
ABCA13-201ENST00000411975 OTOGQ6ZRI0 2925 aa6.94□□□□□ -1.3
ABCA13-201ENST00000411975 Q5VSD8 79 aa6.94□□□□□ -1.3
ABCA13-201ENST00000411975 ASB16-AS1Q495Z4 193 aa6.93□□□□□ -1.3
ABCA13-201ENST00000411975 DMAC1Q96GE9 116 aa6.93□□□□□ -1.3
ABCA13-201ENST00000411975 CSMD1Q96PZ7 3565 aa6.93□□□□□ -1.3
ABCA13-201ENST00000411975 A0A1B0GU33 70 aa6.93□□□□□ -1.3
ABCA13-201ENST00000411975 A0A0D9SG42 100 aa6.92□□□□□ -1.3
ABCA13-201ENST00000411975 FBN1P35555 2871 aaKnown RBP6.91□□□□□ -1.3
ABCA13-201ENST00000411975 LCA10Q71F78 164 aa6.88□□□□□ -1.31
ABCA13-201ENST00000411975 KRTAP13-2Q52LG2 175 aa6.88□□□□□ -1.31
ABCA13-201ENST00000411975 CRIPTQ9P021 101 aa6.86□□□□□ -1.31
ABCA13-201ENST00000411975 LINC01554Q52M75 96 aa6.85□□□□□ -1.31
ABCA13-201ENST00000411975 SPINT4Q6UDR6 99 aa6.85□□□□□ -1.31
ABCA13-201ENST00000411975 PKD1L1Q8TDX9 2849 aa6.84□□□□□ -1.31
ABCA13-201ENST00000411975 KRTAP21-3Q3LHN1 58 aa6.83□□□□□ -1.32
ABCA13-201ENST00000411975 RPS29P62273 56 aaKnown RBP6.82□□□□□ -1.32
ABCA13-201ENST00000411975 SVEP1Q4LDE5 3571 aa6.81□□□□□ -1.32
ABCA13-201ENST00000411975 TGP01266 2768 aa6.8□□□□□ -1.32
ABCA13-201ENST00000411975 CSAG1Q6PB30 78 aa6.8□□□□□ -1.32
ABCA13-201ENST00000411975 S4R3F8 94 aa6.8□□□□□ -1.32
ABCA13-201ENST00000411975 NBPF19A0A087WUL8 3843 aa6.79□□□□□ -1.32
ABCA13-201ENST00000411975 TENM2Q9NT68 2774 aa6.78□□□□□ -1.32
ABCA13-201ENST00000411975 SPENQ96T58 3664 aaKnown RBP6.75□□□□□ -1.33
ABCA13-201ENST00000411975 SEC61BP60468 96 aaKnown RBP6.73□□□□□ -1.33
ABCA13-201ENST00000411975 ZFHX3Q15911 3703 aa6.72□□□□□ -1.33
ABCA13-201ENST00000411975 CUBNO60494 3623 aa6.69□□□□□ -1.34
ABCA13-201ENST00000411975 PRAC1Q96KF2 57 aa6.69□□□□□ -1.34
ABCA13-201ENST00000411975 CSMD2Q7Z408 3487 aa6.68□□□□□ -1.34
ABCA13-201ENST00000411975 KRTAP1-4P0C5Y4 121 aa6.66□□□□□ -1.34
ABCA13-201ENST00000411975 H1FX-AS1Q4G0G2 97 aa6.66□□□□□ -1.34
ABCA13-201ENST00000411975 BSNQ9UPA5 3926 aa6.65□□□□□ -1.35
ABCA13-201ENST00000411975 CAMK2N1Q7Z7J9 78 aa6.63□□□□□ -1.35
ABCA13-201ENST00000411975 R4GN34 69 aa6.62□□□□□ -1.35
ABCA13-201ENST00000411975 RPL37P61927 97 aaKnown RBP6.62□□□□□ -1.35
ABCA13-201ENST00000411975 SPATA8Q6RVD6 105 aa6.61□□□□□ -1.35
ABCA13-201ENST00000411975 M0R2T5 61 aa6.58□□□□□ -1.36
ABCA13-201ENST00000411975 A8MUU9 505 aa6.58□□□□□ -1.36
ABCA13-201ENST00000411975 C20orf166-AS1Q96NR2 134 aa6.56□□□□□ -1.36
ABCA13-201ENST00000411975 ANK3Q12955 4377 aaKnown RBP6.56□□□□□ -1.36
ABCA13-201ENST00000411975 ADM2Q7Z4H4 148 aa6.53□□□□□ -1.36
ABCA13-201ENST00000411975 A8MU10 97 aa6.52□□□□□ -1.36
ABCA13-201ENST00000411975 M0QZ58 72 aa6.52□□□□□ -1.37
ABCA13-201ENST00000411975 TRRAPQ9Y4A5 3859 aa6.5□□□□□ -1.37
ABCA13-201ENST00000411975 ROMO1P60602 79 aa6.5□□□□□ -1.37
ABCA13-201ENST00000411975 A6NN06 94 aa6.49□□□□□ -1.37
ABCA13-201ENST00000411975 KRTAP16-1A8MUX0 517 aa6.46□□□□□ -1.37
ABCA13-201ENST00000411975 FBN3Q75N90 2809 aa6.44□□□□□ -1.38
ABCA13-201ENST00000411975 SRRM2Q9UQ35 2752 aaKnown RBP6.41□□□□□ -1.38
ABCA13-201ENST00000411975 XP32Q5T750 250 aa6.38□□□□□ -1.39
ABCA13-201ENST00000411975 LUZP6Q538Z0 58 aa6.37□□□□□ -1.39
ABCA13-201ENST00000411975 MEGF8Q7Z7M0 2845 aa6.37□□□□□ -1.39
ABCA13-201ENST00000411975 KRTAP13-3Q3SY46 172 aa6.34□□□□□ -1.39
ABCA13-201ENST00000411975 A0A1B0GVY2 172 aa6.33□□□□□ -1.4
ABCA13-201ENST00000411975 VPS13CQ709C8 3753 aa6.28□□□□□ -1.4
ABCA13-201ENST00000411975 KRTAP25-1Q3LHN0 102 aa6.27□□□□□ -1.41
ABCA13-201ENST00000411975 TPRXLQ17RH7 258 aa6.25□□□□□ -1.41
ABCA13-201ENST00000411975 COL7A1Q02388 2944 aa6.25□□□□□ -1.41
ABCA13-201ENST00000411975 KRTAP10-8P60410 259 aa6.24□□□□□ -1.41
ABCA13-201ENST00000411975 PLAC4Q8WY50 150 aa6.22□□□□□ -1.41
ABCA13-201ENST00000411975 H0YAA0 97 aa6.2□□□□□ -1.42
ABCA13-201ENST00000411975 ZNF469Q96JG9 3925 aaPredicted RBP6.18□□□□□ -1.42
ABCA13-201ENST00000411975 H3BS24 57 aa6.11□□□□□ -1.43
ABCA13-201ENST00000411975 P0C880 135 aa6.08□□□□□ -1.44
ABCA13-201ENST00000411975 HUWE1Q7Z6Z7 4374 aaKnown RBP6.07□□□□□ -1.44
ABCA13-201ENST00000411975 TNP1P09430 55 aa6□□□□□ -1.45
ABCA13-201ENST00000411975 KRTAP3-1Q9BYR8 98 aa5.99□□□□□ -1.45
ABCA13-201ENST00000411975 C10orf95Q9H7T3 257 aa5.98□□□□□ -1.45
ABCA13-201ENST00000411975 A0A0A0MQY5 61 aa5.97□□□□□ -1.45
ABCA13-201ENST00000411975 AKAP9Q99996 3911 aa5.97□□□□□ -1.45
ABCA13-201ENST00000411975 PP632Q6XCG6 107 aa5.88□□□□□ -1.47
ABCA13-201ENST00000411975 NDUFAF8A1L188 74 aa5.88□□□□□ -1.47
ABCA13-201ENST00000411975 DNAH9Q9NYC9 4486 aa5.88□□□□□ -1.47
ABCA13-201ENST00000411975 KRTAP10-4P60372 401 aaPredicted RBP5.87□□□□□ -1.47
ABCA13-201ENST00000411975 CSMD3Q7Z407 3707 aa5.86□□□□□ -1.47
ABCA13-201ENST00000411975 MT1HL1P0DM35 61 aa5.84□□□□□ -1.47
ABCA13-201ENST00000411975 KRTAP10-10P60014 251 aa5.82□□□□□ -1.48
ABCA13-201ENST00000411975 KRTAP12-2P59991 146 aa5.81□□□□□ -1.48
ABCA13-201ENST00000411975 KRTAP10-6P60371 365 aaPredicted RBP5.77□□□□□ -1.49
ABCA13-201ENST00000411975 KRTAP12-1P59990 96 aa5.76□□□□□ -1.49
ABCA13-201ENST00000411975 PLECQ15149 4684 aaKnown RBP5.75□□□□□ -1.49
ABCA13-201ENST00000411975 KRTAP13-4Q3LI77 160 aa5.73□□□□□ -1.49
ABCA13-201ENST00000411975 DNHD1Q96M86 4753 aa5.71□□□□□ -1.49
ABCA13-201ENST00000411975 DNAH1Q9P2D7 4330 aa5.69□□□□□ -1.5
ABCA13-201ENST00000411975 DNAH5Q8TE73 4624 aa5.69□□□□□ -1.5
ABCA13-201ENST00000411975 DNAH11Q96DT5 4516 aa5.67□□□□□ -1.5
ABCA13-201ENST00000411975 KRTAP3-3Q9BYR6 98 aa5.66□□□□□ -1.5
ABCA13-201ENST00000411975 ALMS1Q8TCU4 4167 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms