RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 NOTCH2NLQ7Z3S9 236 aa9.84□□□□□ -0.83
LIMS2-208ENST00000410011 SSBP3-AS1Q7Z2R9 100 aa9.83□□□□□ -0.84
LIMS2-208ENST00000410011 Q75L30 129 aa9.82□□□□□ -0.84
LIMS2-208ENST00000410011 C1orf134Q5TEV5 83 aa9.82□□□□□ -0.84
LIMS2-208ENST00000410011 PRR15LQ9BU68 103 aa9.81□□□□□ -0.84
LIMS2-208ENST00000410011 DNAH2Q9P225 4427 aa9.8□□□□□ -0.84
LIMS2-208ENST00000410011 CHKB-CPT1BH3BT56 60 aa9.8□□□□□ -0.84
LIMS2-208ENST00000410011 KRTAP13-3Q3SY46 172 aa9.8□□□□□ -0.84
LIMS2-208ENST00000410011 LINC01558Q9Y6Z2 57 aa9.79□□□□□ -0.84
LIMS2-208ENST00000410011 C8orf87E5RJ46 101 aa9.78□□□□□ -0.84
LIMS2-208ENST00000410011 FRAS1Q86XX4 4008 aa9.76□□□□□ -0.85
LIMS2-208ENST00000410011 HRES1P13985 223 aa9.76□□□□□ -0.85
LIMS2-208ENST00000410011 CIRBP-AS1Q8TBR5 109 aa9.74□□□□□ -0.85
LIMS2-208ENST00000410011 KMT2AQ03164 3969 aa9.74□□□□□ -0.85
LIMS2-208ENST00000410011 Q5W150 140 aa9.74□□□□□ -0.85
LIMS2-208ENST00000410011 SPINK6Q6UWN8 80 aa9.73□□□□□ -0.85
LIMS2-208ENST00000410011 PMAIP1Q13794 54 aa9.71□□□□□ -0.85
LIMS2-208ENST00000410011 SPAG11AQ6PDA7 123 aa9.68□□□□□ -0.86
LIMS2-208ENST00000410011 A8MU10 97 aa9.68□□□□□ -0.86
LIMS2-208ENST00000410011 ATP11AUNQ6ZP68 121 aa9.67□□□□□ -0.86
LIMS2-208ENST00000410011 LCA10Q71F78 164 aa9.67□□□□□ -0.86
LIMS2-208ENST00000410011 A6NED7 52 aa9.66□□□□□ -0.86
LIMS2-208ENST00000410011 LINC00313P59037 77 aa9.65□□□□□ -0.86
LIMS2-208ENST00000410011 CDC42SE1Q9NRR8 79 aa9.65□□□□□ -0.87
LIMS2-208ENST00000410011 FBN3Q75N90 2809 aa9.64□□□□□ -0.87
LIMS2-208ENST00000410011 FAM229AH3BQW9 127 aa9.64□□□□□ -0.87
LIMS2-208ENST00000410011 ACYP2P14621 99 aa9.64□□□□□ -0.87
LIMS2-208ENST00000410011 ALMS1Q8TCU4 4167 aa9.64□□□□□ -0.87
LIMS2-208ENST00000410011 Q6ZSA8 131 aa9.62□□□□□ -0.87
LIMS2-208ENST00000410011 DNAH11Q96DT5 4516 aa9.62□□□□□ -0.87
LIMS2-208ENST00000410011 LY6G6CO95867 125 aa9.61□□□□□ -0.87
LIMS2-208ENST00000410011 DNAH6Q9C0G6 4158 aa9.61□□□□□ -0.87
LIMS2-208ENST00000410011 KRTAP10-2P60368 255 aa9.61□□□□□ -0.87
LIMS2-208ENST00000410011 KRTAP13-2Q52LG2 175 aa9.6□□□□□ -0.87
LIMS2-208ENST00000410011 DMAC1Q96GE9 116 aa9.6□□□□□ -0.87
LIMS2-208ENST00000410011 MEGF8Q7Z7M0 2845 aa9.59□□□□□ -0.87
LIMS2-208ENST00000410011 DNAH5Q8TE73 4624 aa9.58□□□□□ -0.88
LIMS2-208ENST00000410011 TGP01266 2768 aa9.56□□□□□ -0.88
LIMS2-208ENST00000410011 IGKV2-30P06310 120 aa9.55□□□□□ -0.88
LIMS2-208ENST00000410011 PRR26Q8N8Z3 221 aa9.55□□□□□ -0.88
LIMS2-208ENST00000410011 KRTAP16-1A8MUX0 517 aa9.54□□□□□ -0.88
LIMS2-208ENST00000410011 SPTSSBQ8NFR3 76 aa9.52□□□□□ -0.89
LIMS2-208ENST00000410011 KRTAP1-4P0C5Y4 121 aa9.51□□□□□ -0.89
LIMS2-208ENST00000410011 SPINK7P58062 85 aa9.5□□□□□ -0.89
LIMS2-208ENST00000410011 KRTAP10-1P60331 282 aa9.5□□□□□ -0.89
LIMS2-208ENST00000410011 A6NN06 94 aa9.5□□□□□ -0.89
LIMS2-208ENST00000410011 KTN1-AS1Q86SY8 53 aa9.48□□□□□ -0.89
LIMS2-208ENST00000410011 SEC61GP60059 68 aa9.47□□□□□ -0.89
LIMS2-208ENST00000410011 LRP1BQ9NZR2 4599 aa9.46□□□□□ -0.9
LIMS2-208ENST00000410011 SPINK1P00995 79 aa9.41□□□□□ -0.9
LIMS2-208ENST00000410011 RETNLBQ9BQ08 111 aa9.4□□□□□ -0.9
LIMS2-208ENST00000410011 PKD1P98161 4303 aa9.4□□□□□ -0.9
LIMS2-208ENST00000410011 C4orf48Q5BLP8 95 aa9.39□□□□□ -0.91
LIMS2-208ENST00000410011 PLA2G1BP04054 148 aaKnown RBP9.37□□□□□ -0.91
LIMS2-208ENST00000410011 FAT2Q9NYQ8 4349 aa9.37□□□□□ -0.91
LIMS2-208ENST00000410011 TYMSOSQ8TAI1 123 aa9.36□□□□□ -0.91
LIMS2-208ENST00000410011 A0A1B0GU69 56 aa9.36□□□□□ -0.91
LIMS2-208ENST00000410011 RPS29P62273 56 aaKnown RBP9.36□□□□□ -0.91
LIMS2-208ENST00000410011 DNHD1Q96M86 4753 aa9.35□□□□□ -0.91
LIMS2-208ENST00000410011 IGKV2D-30A0A075B6S6 120 aa9.33□□□□□ -0.92
LIMS2-208ENST00000410011 C7orf65Q6ZTY9 151 aa9.32□□□□□ -0.92
LIMS2-208ENST00000410011 VPS13BQ7Z7G8 4022 aa9.31□□□□□ -0.92
LIMS2-208ENST00000410011 SPATA8Q6RVD6 105 aa9.3□□□□□ -0.92
LIMS2-208ENST00000410011 HYDINQ4G0P3 5121 aa9.25□□□□□ -0.93
LIMS2-208ENST00000410011 UQCR11O14957 56 aa9.23□□□□□ -0.93
LIMS2-208ENST00000410011 LINC00304Q8N9R0 145 aa9.23□□□□□ -0.93
LIMS2-208ENST00000410011 RBM12B-AS1Q9P1G2 102 aa9.22□□□□□ -0.93
LIMS2-208ENST00000410011 SACSQ9NZJ4 4579 aa9.2□□□□□ -0.94
LIMS2-208ENST00000410011 MIR22HGQ0VDD5 57 aa9.19□□□□□ -0.94
LIMS2-208ENST00000410011 C20orf166-AS1Q96NR2 134 aa9.13□□□□□ -0.95
LIMS2-208ENST00000410011 A8MUU9 505 aa9.13□□□□□ -0.95
LIMS2-208ENST00000410011 Q8N1X5 172 aa9.09□□□□□ -0.95
LIMS2-208ENST00000410011 KRTAP21-3Q3LHN1 58 aa9.05□□□□□ -0.96
LIMS2-208ENST00000410011 KRTAP10-4P60372 401 aaPredicted RBP9.03□□□□□ -0.96
LIMS2-208ENST00000410011 PKHD1L1Q86WI1 4243 aa9.02□□□□□ -0.96
LIMS2-208ENST00000410011 PKHD1P08F94 4074 aa9.01□□□□□ -0.97
LIMS2-208ENST00000410011 A0A1B0GVY2 172 aa8.99□□□□□ -0.97
LIMS2-208ENST00000410011 SMR3BP02814 79 aaPredicted RBP8.99□□□□□ -0.97
LIMS2-208ENST00000410011 DYNC1H1Q14204 4646 aaKnown RBP8.99□□□□□ -0.97
LIMS2-208ENST00000410011 C9orf92A6NGG3 77 aa8.98□□□□□ -0.97
LIMS2-208ENST00000410011 KRTAP3-1Q9BYR8 98 aa8.97□□□□□ -0.97
LIMS2-208ENST00000410011 APOBP04114 4563 aaKnown RBP8.96□□□□□ -0.98
LIMS2-208ENST00000410011 PRAC1Q96KF2 57 aa8.93□□□□□ -0.98
LIMS2-208ENST00000410011 ADM2Q7Z4H4 148 aa8.92□□□□□ -0.98
LIMS2-208ENST00000410011 FAT1Q14517 4588 aa8.88□□□□□ -0.99
LIMS2-208ENST00000410011 H0YAA0 97 aa8.86□□□□□ -0.99
LIMS2-208ENST00000410011 COX6B2Q6YFQ2 88 aa8.85□□□□□ -0.99
LIMS2-208ENST00000410011 A0A1B0GU33 70 aa8.85□□□□□ -0.99
LIMS2-208ENST00000410011 H1FX-AS1Q4G0G2 97 aa8.81□□□□□ -1
LIMS2-208ENST00000410011 LINC01554Q52M75 96 aa8.77□□□□□ -1
LIMS2-208ENST00000410011 FLG2Q5D862 2391 aaPredicted RBP8.75□□□□□ -1.01
LIMS2-208ENST00000410011 CSAG1Q6PB30 78 aa8.72□□□□□ -1.01
LIMS2-208ENST00000410011 KRTAP10-8P60410 259 aa8.71□□□□□ -1.01
LIMS2-208ENST00000410011 FAT3Q8TDW7 4589 aa8.69□□□□□ -1.02
LIMS2-208ENST00000410011 RPL37P61927 97 aaKnown RBP8.65□□□□□ -1.03
LIMS2-208ENST00000410011 RYR2Q92736 4967 aa8.64□□□□□ -1.03
LIMS2-208ENST00000410011 TNXBP22105 4242 aa8.63□□□□□ -1.03
LIMS2-208ENST00000410011 K7ERS5 55 aa8.6□□□□□ -1.03
LIMS2-208ENST00000410011 KRTAP3-3Q9BYR6 98 aa8.6□□□□□ -1.03
LIMS2-208ENST00000410011 KRTAP10-6P60371 365 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 166 ms