RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 OCIAD2Q56VL3 154 aa2.32□□□□□ -2.04
CLK1-203ENST00000409769 PPDPFLQ8WWR9 84 aa2.32□□□□□ -2.04
CLK1-203ENST00000409769 SPRR4Q96PI1 79 aa2.32□□□□□ -2.04
CLK1-203ENST00000409769 ORMDL1Q9P0S3 153 aa2.32□□□□□ -2.04
CLK1-203ENST00000409769 LRP1Q07954 4544 aaKnown RBP2.32□□□□□ -2.04
CLK1-203ENST00000409769 H3BQ85 93 aa2.31□□□□□ -2.04
CLK1-203ENST00000409769 H3BT86 120 aa2.31□□□□□ -2.04
CLK1-203ENST00000409769 SNCGO76070 127 aa2.31□□□□□ -2.04
CLK1-203ENST00000409769 DNAL4O96015 105 aa2.31□□□□□ -2.04
CLK1-203ENST00000409769 BAALC-AS2P0C853 105 aa2.31□□□□□ -2.04
CLK1-203ENST00000409769 Q5VSD8 79 aa2.31□□□□□ -2.04
CLK1-203ENST00000409769 SPINK6Q6UWN8 80 aa2.31□□□□□ -2.04
CLK1-203ENST00000409769 MYCBP2O75592 4640 aa2.3□□□□□ -2.04
CLK1-203ENST00000409769 TEX49A0A1B0GTD5 131 aa2.3□□□□□ -2.04
CLK1-203ENST00000409769 F8W1H4 67 aa2.3□□□□□ -2.04
CLK1-203ENST00000409769 TMEM256-PLSCR3K7ERE1 68 aa2.3□□□□□ -2.04
CLK1-203ENST00000409769 IGFL1Q6UW32 110 aa2.3□□□□□ -2.04
CLK1-203ENST00000409769 ANKRD29Q8N6D5 301 aa2.3□□□□□ -2.04
CLK1-203ENST00000409769 OBSCN-AS1Q96MR7 158 aa2.3□□□□□ -2.04
CLK1-203ENST00000409769 ZNF706Q9Y5V0 76 aaPredicted RBP2.3□□□□□ -2.04
CLK1-203ENST00000409769 ABCA13Q86UQ4 5058 aa2.3□□□□□ -2.04
CLK1-203ENST00000409769 FLG2Q5D862 2391 aaPredicted RBP2.3□□□□□ -2.04
CLK1-203ENST00000409769 TNXBP22105 4242 aa2.29□□□□□ -2.04
CLK1-203ENST00000409769 SRRM2Q9UQ35 2752 aaKnown RBP2.29□□□□□ -2.04
CLK1-203ENST00000409769 FAM229BQ4G0N7 80 aa2.29□□□□□ -2.04
CLK1-203ENST00000409769 C3orf22Q8N5N4 141 aa2.29□□□□□ -2.04
CLK1-203ENST00000409769 KRTAP13-2Q52LG2 175 aa2.28□□□□□ -2.04
CLK1-203ENST00000409769 Q5W150 140 aa2.28□□□□□ -2.04
CLK1-203ENST00000409769 TEN1Q86WV5 123 aa2.28□□□□□ -2.04
CLK1-203ENST00000409769 DEFB105AQ8NG35 78 aa2.28□□□□□ -2.04
CLK1-203ENST00000409769 TRBV7-4A0A0J9YYF1 115 aa2.27□□□□□ -2.05
CLK1-203ENST00000409769 JMJD7-PLA2G4BH0Y9G9 81 aa2.27□□□□□ -2.05
CLK1-203ENST00000409769 ETDBQ3ZM63 59 aa2.27□□□□□ -2.05
CLK1-203ENST00000409769 LAMTOR3Q9UHA4 124 aa2.27□□□□□ -2.05
CLK1-203ENST00000409769 LOC110117498A0A087WWA1 95 aa2.26□□□□□ -2.05
CLK1-203ENST00000409769 CRYGAP11844 174 aa2.26□□□□□ -2.05
CLK1-203ENST00000409769 RBM3P98179 157 aaKnown RBP2.26□□□□□ -2.05
CLK1-203ENST00000409769 Q6JHZ5 121 aa2.26□□□□□ -2.05
CLK1-203ENST00000409769 Q6ZQT0 140 aa2.26□□□□□ -2.05
CLK1-203ENST00000409769 C14orf132Q9NPU4 83 aa2.26□□□□□ -2.05
CLK1-203ENST00000409769 A0A0G2JQZ4 141 aa2.25□□□□□ -2.05
CLK1-203ENST00000409769 A0A1B0GV72 72 aa2.25□□□□□ -2.05
CLK1-203ENST00000409769 A0A1W2PNM2 257 aa2.25□□□□□ -2.05
CLK1-203ENST00000409769 F8WEM9 126 aa2.25□□□□□ -2.05
CLK1-203ENST00000409769 C9orf153Q5TBE3 101 aa2.25□□□□□ -2.05
CLK1-203ENST00000409769 Q6Q795 121 aa2.25□□□□□ -2.05
CLK1-203ENST00000409769 SSBP3-AS1Q7Z2R9 100 aa2.25□□□□□ -2.05
CLK1-203ENST00000409769 PCLOQ9Y6V0 5065 aa2.24□□□□□ -2.05
CLK1-203ENST00000409769 A0A1B0GVX0 72 aa2.24□□□□□ -2.05
CLK1-203ENST00000409769 CCKP06307 115 aa2.24□□□□□ -2.05
CLK1-203ENST00000409769 MT1HL1P0DM35 61 aa2.24□□□□□ -2.05
CLK1-203ENST00000409769 PDE6GP18545 87 aa2.24□□□□□ -2.05
CLK1-203ENST00000409769 CD164Q04900 197 aa2.24□□□□□ -2.05
CLK1-203ENST00000409769 DSCR8Q96T75 97 aa2.24□□□□□ -2.05
CLK1-203ENST00000409769 DMBT1Q9UGM3 2413 aaPredicted RBP2.24□□□□□ -2.05
CLK1-203ENST00000409769 TRBV7-7A0A0K0K1E9 115 aa2.23□□□□□ -2.05
CLK1-203ENST00000409769 A0A1B0GW54 56 aa2.23□□□□□ -2.05
CLK1-203ENST00000409769 OXTP01178 125 aa2.23□□□□□ -2.05
CLK1-203ENST00000409769 Q5XG85 94 aa2.23□□□□□ -2.05
CLK1-203ENST00000409769 FAM240AA0A1B0GVK7 77 aa2.22□□□□□ -2.05
CLK1-203ENST00000409769 RPS29P62273 56 aaKnown RBP2.22□□□□□ -2.05
CLK1-203ENST00000409769 SPAG11AQ6PDA7 123 aa2.22□□□□□ -2.05
CLK1-203ENST00000409769 LINC00304Q8N9R0 145 aa2.22□□□□□ -2.05
CLK1-203ENST00000409769 A0A087WSZ3 146 aa2.21□□□□□ -2.06
CLK1-203ENST00000409769 SPINK1P00995 79 aa2.21□□□□□ -2.06
CLK1-203ENST00000409769 ACYP1P07311 99 aa2.21□□□□□ -2.06
CLK1-203ENST00000409769 ASB16-AS1Q495Z4 193 aa2.21□□□□□ -2.06
CLK1-203ENST00000409769 LINC00846Q9NV44 126 aa2.21□□□□□ -2.06
CLK1-203ENST00000409769 J3QR89 54 aa2.2□□□□□ -2.06
CLK1-203ENST00000409769 HRCT1Q6UXD1 115 aa2.2□□□□□ -2.06
CLK1-203ENST00000409769 Q96NJ1 140 aa2.2□□□□□ -2.06
CLK1-203ENST00000409769 VPS25Q9BRG1 176 aa2.2□□□□□ -2.06
CLK1-203ENST00000409769 LINC00472Q9H8W2 130 aa2.2□□□□□ -2.06
CLK1-203ENST00000409769 K7ERU9 68 aa2.19□□□□□ -2.06
CLK1-203ENST00000409769 LIMD2Q9BT23 127 aa2.19□□□□□ -2.06
CLK1-203ENST00000409769 SS18L2Q9UHA2 77 aa2.19□□□□□ -2.06
CLK1-203ENST00000409769 C1orf195Q5TG92 126 aa2.18□□□□□ -2.06
CLK1-203ENST00000409769 HERC1Q15751 4861 aa2.18□□□□□ -2.06
CLK1-203ENST00000409769 NREPQ16612 68 aa2.17□□□□□ -2.06
CLK1-203ENST00000409769 UBL5Q9BZL1 73 aa2.17□□□□□ -2.06
CLK1-203ENST00000409769 LINC00643Q86TS7 51 aa2.16□□□□□ -2.06
CLK1-203ENST00000409769 IGKV3D-7A0A0C4DH55 119 aa2.15□□□□□ -2.07
CLK1-203ENST00000409769 A8MWP4 228 aa2.15□□□□□ -2.07
CLK1-203ENST00000409769 J3KT08 172 aa2.15□□□□□ -2.07
CLK1-203ENST00000409769 BPY2O14599 106 aa2.15□□□□□ -2.07
CLK1-203ENST00000409769 IGKV4-1P06312 121 aa2.15□□□□□ -2.07
CLK1-203ENST00000409769 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
CLK1-203ENST00000409769 ATP5EP2Q5VTU8 51 aa2.15□□□□□ -2.07
CLK1-203ENST00000409769 FP248Q71RG6 208 aaPredicted RBP2.15□□□□□ -2.07
CLK1-203ENST00000409769 SIGMAR1Q99720 223 aa2.15□□□□□ -2.07
CLK1-203ENST00000409769 RETNLBQ9BQ08 111 aa2.15□□□□□ -2.07
CLK1-203ENST00000409769 LRP2P98164 4655 aa2.15□□□□□ -2.07
CLK1-203ENST00000409769 HMCN2Q8NDA2 5059 aa2.14□□□□□ -2.07
CLK1-203ENST00000409769 K7EQZ3 153 aa2.14□□□□□ -2.07
CLK1-203ENST00000409769 MT-ATP8P03928 68 aa2.14□□□□□ -2.07
CLK1-203ENST00000409769 SEC61GP60059 68 aa2.14□□□□□ -2.07
CLK1-203ENST00000409769 PRR15Q8IV56 129 aa2.14□□□□□ -2.07
CLK1-203ENST00000409769 LPAP08519 4548 aa2.14□□□□□ -2.07
CLK1-203ENST00000409769 IMUPQ9GZP8 106 aa2.13□□□□□ -2.07
CLK1-203ENST00000409769 IGHV6-1A0A0B4J1U7 121 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms