RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 TPRXLQ17RH7 258 aa6.69□□□□□ -1.34
RNF43-201ENST00000407977 HIVEP1P15822 2718 aa6.69□□□□□ -1.34
RNF43-201ENST00000407977 KRTAP13-3Q3SY46 172 aa6.69□□□□□ -1.34
RNF43-201ENST00000407977 ASH1LQ9NR48 2969 aaKnown RBP6.68□□□□□ -1.34
RNF43-201ENST00000407977 KRTAP21-3Q3LHN1 58 aa6.66□□□□□ -1.34
RNF43-201ENST00000407977 VPS13AQ96RL7 3174 aa6.66□□□□□ -1.34
RNF43-201ENST00000407977 XIRP2A4UGR9 3374 aa6.66□□□□□ -1.34
RNF43-201ENST00000407977 FLNCQ14315 2725 aa6.66□□□□□ -1.34
RNF43-201ENST00000407977 PRUNE2Q8WUY3 3088 aa6.65□□□□□ -1.35
RNF43-201ENST00000407977 FREM2Q5SZK8 3169 aa6.65□□□□□ -1.35
RNF43-201ENST00000407977 SZT2Q5T011 3432 aa6.64□□□□□ -1.35
RNF43-201ENST00000407977 TACC2O95359 2948 aa6.64□□□□□ -1.35
RNF43-201ENST00000407977 DMXL2Q8TDJ6 3036 aa6.61□□□□□ -1.35
RNF43-201ENST00000407977 NBEAQ8NFP9 2946 aa6.59□□□□□ -1.35
RNF43-201ENST00000407977 PRO2289Q9P1D8 64 aa6.56□□□□□ -1.36
RNF43-201ENST00000407977 TENM4Q6N022 2769 aa6.56□□□□□ -1.36
RNF43-201ENST00000407977 VCANP13611 3396 aa6.56□□□□□ -1.36
RNF43-201ENST00000407977 LRBAP50851 2863 aa6.55□□□□□ -1.36
RNF43-201ENST00000407977 SPEGQ15772 3267 aa6.55□□□□□ -1.36
RNF43-201ENST00000407977 ATMQ13315 3056 aa6.55□□□□□ -1.36
RNF43-201ENST00000407977 CELSR2Q9HCU4 2923 aa6.53□□□□□ -1.36
RNF43-201ENST00000407977 EYSQ5T1H1 3165 aa6.53□□□□□ -1.36
RNF43-201ENST00000407977 REV3LO60673 3130 aa6.53□□□□□ -1.36
RNF43-201ENST00000407977 A0A1B0GVY2 172 aa6.52□□□□□ -1.37
RNF43-201ENST00000407977 LAMA1P25391 3075 aa6.51□□□□□ -1.37
RNF43-201ENST00000407977 SPTBN5Q9NRC6 3674 aaKnown RBP6.51□□□□□ -1.37
RNF43-201ENST00000407977 ADGRG4Q8IZF6 3080 aa6.5□□□□□ -1.37
RNF43-201ENST00000407977 COL12A1Q99715 3063 aa6.49□□□□□ -1.37
RNF43-201ENST00000407977 USP34Q70CQ2 3546 aa6.49□□□□□ -1.37
RNF43-201ENST00000407977 MYO15AQ9UKN7 3530 aa6.49□□□□□ -1.37
RNF43-201ENST00000407977 FRYLO94915 3013 aa6.48□□□□□ -1.37
RNF43-201ENST00000407977 KRTAP10-10P60014 251 aa6.47□□□□□ -1.37
RNF43-201ENST00000407977 KRTAP12-2P59991 146 aa6.46□□□□□ -1.37
RNF43-201ENST00000407977 KRTAP13-4Q3LI77 160 aa6.46□□□□□ -1.38
RNF43-201ENST00000407977 DCHS2Q6V1P9 2916 aa6.45□□□□□ -1.38
RNF43-201ENST00000407977 TGP01266 2768 aa6.45□□□□□ -1.38
RNF43-201ENST00000407977 TENM3Q9P273 2699 aa6.44□□□□□ -1.38
RNF43-201ENST00000407977 KRTAP12-1P59990 96 aa6.4□□□□□ -1.39
RNF43-201ENST00000407977 ZZEF1O43149 2961 aa6.39□□□□□ -1.39
RNF43-201ENST00000407977 CELSR3Q9NYQ7 3312 aa6.37□□□□□ -1.39
RNF43-201ENST00000407977 ZANQ9Y493 2812 aa6.34□□□□□ -1.39
RNF43-201ENST00000407977 BOD1L1Q8NFC6 3051 aa6.32□□□□□ -1.4
RNF43-201ENST00000407977 TENM1Q9UKZ4 2725 aa6.31□□□□□ -1.4
RNF43-201ENST00000407977 CRYBG3Q68DQ2 2970 aa6.28□□□□□ -1.4
RNF43-201ENST00000407977 KRTAP3-1Q9BYR8 98 aa6.28□□□□□ -1.4
RNF43-201ENST00000407977 NF1P21359 2839 aa6.27□□□□□ -1.41
RNF43-201ENST00000407977 COL6A3P12111 3177 aa6.24□□□□□ -1.41
RNF43-201ENST00000407977 HRNRQ86YZ3 2850 aaPredicted RBP6.22□□□□□ -1.41
RNF43-201ENST00000407977 TNRC18O15417 2968 aaPredicted RBP6.19□□□□□ -1.42
RNF43-201ENST00000407977 FBN2P35556 2912 aa6.19□□□□□ -1.42
RNF43-201ENST00000407977 KRTAP10-6P60371 365 aaPredicted RBP6.18□□□□□ -1.42
RNF43-201ENST00000407977 WDFY3Q8IZQ1 3526 aa6.17□□□□□ -1.42
RNF43-201ENST00000407977 TENM2Q9NT68 2774 aa6.16□□□□□ -1.42
RNF43-201ENST00000407977 DMDP11532 3685 aa6.14□□□□□ -1.43
RNF43-201ENST00000407977 CFAP47Q6ZTR5 3102 aa6.13□□□□□ -1.43
RNF43-201ENST00000407977 INE1O15225 51 aa6.13□□□□□ -1.43
RNF43-201ENST00000407977 PDZD2O15018 2839 aa6.11□□□□□ -1.43
RNF43-201ENST00000407977 CELSR1Q9NYQ6 3014 aa6.1□□□□□ -1.43
RNF43-201ENST00000407977 KRTAP15-1Q3LI76 137 aa6.09□□□□□ -1.43
RNF43-201ENST00000407977 MUC3AQ02505 3323 aa6.07□□□□□ -1.44
RNF43-201ENST00000407977 LOC400499M0QZD8 3231 aa6.06□□□□□ -1.44
RNF43-201ENST00000407977 ASPMQ8IZT6 3477 aa6.01□□□□□ -1.45
RNF43-201ENST00000407977 MXRA5Q9NR99 2828 aa5.99□□□□□ -1.45
RNF43-201ENST00000407977 DMXL1Q9Y485 3027 aa5.97□□□□□ -1.45
RNF43-201ENST00000407977 ZFHX4Q86UP3 3567 aa5.95□□□□□ -1.46
RNF43-201ENST00000407977 KRTAP3-2Q9BYR7 98 aa5.94□□□□□ -1.46
RNF43-201ENST00000407977 LAMA5O15230 3695 aa5.92□□□□□ -1.46
RNF43-201ENST00000407977 PKD1L1Q8TDX9 2849 aa5.92□□□□□ -1.46
RNF43-201ENST00000407977 DCHS1Q96JQ0 3298 aa5.89□□□□□ -1.47
RNF43-201ENST00000407977 KRTAP3-3Q9BYR6 98 aa5.87□□□□□ -1.47
RNF43-201ENST00000407977 KRTAP23-1A1A580 65 aa5.87□□□□□ -1.47
RNF43-201ENST00000407977 VWFP04275 2813 aa5.85□□□□□ -1.47
RNF43-201ENST00000407977 SMG1Q96Q15 3661 aaKnown RBP5.83□□□□□ -1.48
RNF43-201ENST00000407977 RELNP78509 3460 aa5.78□□□□□ -1.48
RNF43-201ENST00000407977 KRTAP10-12P60413 245 aa5.76□□□□□ -1.49
RNF43-201ENST00000407977 FBN3Q75N90 2809 aa5.72□□□□□ -1.49
RNF43-201ENST00000407977 SPENQ96T58 3664 aaKnown RBP5.72□□□□□ -1.49
RNF43-201ENST00000407977 MEGF8Q7Z7M0 2845 aa5.72□□□□□ -1.49
RNF43-201ENST00000407977 CSMD1Q96PZ7 3565 aa5.71□□□□□ -1.49
RNF43-201ENST00000407977 MT1HL1P0DM35 61 aa5.7□□□□□ -1.5
RNF43-201ENST00000407977 KRTAP12-3P60328 96 aa5.67□□□□□ -1.5
RNF43-201ENST00000407977 SVEP1Q4LDE5 3571 aa5.65□□□□□ -1.5
RNF43-201ENST00000407977 SRRM2Q9UQ35 2752 aaKnown RBP5.64□□□□□ -1.51
RNF43-201ENST00000407977 FBN1P35555 2871 aaKnown RBP5.57□□□□□ -1.52
RNF43-201ENST00000407977 KRTAP10-4P60372 401 aaPredicted RBP5.56□□□□□ -1.52
RNF43-201ENST00000407977 BSNQ9UPA5 3926 aa5.55□□□□□ -1.52
RNF43-201ENST00000407977 LCE3AQ5TA76 89 aa5.54□□□□□ -1.52
RNF43-201ENST00000407977 COL7A1Q02388 2944 aa5.53□□□□□ -1.52
RNF43-201ENST00000407977 OTOGQ6ZRI0 2925 aa5.46□□□□□ -1.54
RNF43-201ENST00000407977 CRCT1Q9UGL9 99 aa5.45□□□□□ -1.54
RNF43-201ENST00000407977 CUBNO60494 3623 aa5.44□□□□□ -1.54
RNF43-201ENST00000407977 LORP23490 312 aaPredicted RBP5.39□□□□□ -1.55
RNF43-201ENST00000407977 ZFHX3Q15911 3703 aa5.35□□□□□ -1.55
RNF43-201ENST00000407977 CSMD2Q7Z408 3487 aa5.35□□□□□ -1.55
RNF43-201ENST00000407977 VPS13CQ709C8 3753 aa5.35□□□□□ -1.55
RNF43-201ENST00000407977 ANK3Q12955 4377 aaKnown RBP5.31□□□□□ -1.56
RNF43-201ENST00000407977 KRTAP10-5P60370 271 aa5.26□□□□□ -1.57
RNF43-201ENST00000407977 KRTAP4-5Q9BYR2 181 aa5.22□□□□□ -1.57
RNF43-201ENST00000407977 NBPF19A0A087WUL8 3843 aa5.22□□□□□ -1.57
RNF43-201ENST00000407977 KRTAP8-1Q8IUC2 63 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms