RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 HRNRQ86YZ3 2850 aaPredicted RBP0.33□□□□□ -2.36
PTPN12-202ENST00000407343 SRCAPQ6ZRS2 3230 aa0.32□□□□□ -2.36
PTPN12-202ENST00000407343 DCHS2Q6V1P9 2916 aa0.32□□□□□ -2.36
PTPN12-202ENST00000407343 ATP7AQ04656 1500 aa0.32□□□□□ -2.36
PTPN12-202ENST00000407343 GCN1Q92616 2671 aaKnown RBP0.31□□□□□ -2.36
PTPN12-202ENST00000407343 LRP1Q07954 4544 aaKnown RBP0.31□□□□□ -2.36
PTPN12-202ENST00000407343 NBASA2RRP1 2371 aa0.31□□□□□ -2.36
PTPN12-202ENST00000407343 DDX60Q8IY21 1712 aaKnown RBP0.31□□□□□ -2.36
PTPN12-202ENST00000407343 H3BUA1 57 aa0.31□□□□□ -2.36
PTPN12-202ENST00000407343 SMIM2Q9BVW6 85 aa0.31□□□□□ -2.36
PTPN12-202ENST00000407343 KAAG1Q9UBP8 84 aa0.31□□□□□ -2.36
PTPN12-202ENST00000407343 ZZEF1O43149 2961 aa0.31□□□□□ -2.36
PTPN12-202ENST00000407343 WNK1Q9H4A3 2382 aa0.31□□□□□ -2.36
PTPN12-202ENST00000407343 ACANP16112 2415 aa0.3□□□□□ -2.36
PTPN12-202ENST00000407343 COL6A3P12111 3177 aa0.3□□□□□ -2.36
PTPN12-202ENST00000407343 TACC2O95359 2948 aa0.3□□□□□ -2.36
PTPN12-202ENST00000407343 H0YGG7 62 aa0.3□□□□□ -2.36
PTPN12-202ENST00000407343 RYR3Q15413 4870 aa0.3□□□□□ -2.36
PTPN12-202ENST00000407343 KMT2AQ03164 3969 aa0.3□□□□□ -2.36
PTPN12-202ENST00000407343 A0A0C4DFX4 3053 aa0.29□□□□□ -2.36
PTPN12-202ENST00000407343 DOPEY1Q5JWR5 2465 aa0.29□□□□□ -2.36
PTPN12-202ENST00000407343 MAP1AP78559 2803 aaPredicted RBP0.29□□□□□ -2.36
PTPN12-202ENST00000407343 LYSTQ99698 3801 aa0.29□□□□□ -2.36
PTPN12-202ENST00000407343 SETD2Q9BYW2 2564 aaPredicted RBP0.29□□□□□ -2.36
PTPN12-202ENST00000407343 SAMD9LQ8IVG5 1584 aa0.29□□□□□ -2.36
PTPN12-202ENST00000407343 DMXL1Q9Y485 3027 aa0.29□□□□□ -2.36
PTPN12-202ENST00000407343 CLTCL1P53675 1640 aa0.29□□□□□ -2.36
PTPN12-202ENST00000407343 SPRR2DP22532 72 aa0.29□□□□□ -2.36
PTPN12-202ENST00000407343 WFDC10BQ8IUB3 73 aa0.29□□□□□ -2.36
PTPN12-202ENST00000407343 MYCBP2O75592 4640 aa0.29□□□□□ -2.36
PTPN12-202ENST00000407343 TRPM2O94759 1503 aa0.28□□□□□ -2.36
PTPN12-202ENST00000407343 USP9XQ93008 2570 aaPredicted RBP0.28□□□□□ -2.36
PTPN12-202ENST00000407343 ZFHX4Q86UP3 3567 aa0.28□□□□□ -2.36
PTPN12-202ENST00000407343 MAST4O15021 2626 aa0.28□□□□□ -2.36
PTPN12-202ENST00000407343 FLNAP21333 2647 aaKnown RBP0.28□□□□□ -2.36
PTPN12-202ENST00000407343 UTP20O75691 2785 aaKnown RBP0.28□□□□□ -2.36
PTPN12-202ENST00000407343 TENM2Q9NT68 2774 aa0.28□□□□□ -2.36
PTPN12-202ENST00000407343 IGLV5-48A0A075B6I7 105 aa0.28□□□□□ -2.36
PTPN12-202ENST00000407343 CCDC168Q8NDH2 2452 aa0.28□□□□□ -2.36
PTPN12-202ENST00000407343 BIRC6Q9NR09 4857 aa0.28□□□□□ -2.37
PTPN12-202ENST00000407343 COL6A5A8TX70 2615 aa0.28□□□□□ -2.37
PTPN12-202ENST00000407343 TEP1Q99973 2627 aaKnown RBP0.28□□□□□ -2.37
PTPN12-202ENST00000407343 SZT2Q5T011 3432 aa0.28□□□□□ -2.37
PTPN12-202ENST00000407343 APC2O95996 2303 aa0.27□□□□□ -2.37
PTPN12-202ENST00000407343 FASNP49327 2511 aaKnown RBP0.27□□□□□ -2.37
PTPN12-202ENST00000407343 ANKRD11Q6UB99 2663 aaPredicted RBP0.27□□□□□ -2.37
PTPN12-202ENST00000407343 COL7A1Q02388 2944 aa0.27□□□□□ -2.37
PTPN12-202ENST00000407343 NDUFA1O15239 70 aa0.27□□□□□ -2.37
PTPN12-202ENST00000407343 KALRNO60229 2985 aa0.27□□□□□ -2.37
PTPN12-202ENST00000407343 CEP350Q5VT06 3117 aa0.27□□□□□ -2.37
PTPN12-202ENST00000407343 KIAA1109Q2LD37 5005 aa0.26□□□□□ -2.37
PTPN12-202ENST00000407343 MYO9AB2RTY4 2548 aa0.26□□□□□ -2.37
PTPN12-202ENST00000407343 SPTBN4Q9H254 2564 aa0.26□□□□□ -2.37
PTPN12-202ENST00000407343 MMP24-AS1A0A0U1RRL7 71 aa0.26□□□□□ -2.37
PTPN12-202ENST00000407343 UBR4Q5T4S7 5183 aa0.26□□□□□ -2.37
PTPN12-202ENST00000407343 LPAP08519 4548 aa0.26□□□□□ -2.37
PTPN12-202ENST00000407343 RYR1P21817 5038 aa0.26□□□□□ -2.37
PTPN12-202ENST00000407343 LAMA2P24043 3122 aaKnown RBP0.25□□□□□ -2.37
PTPN12-202ENST00000407343 NBEAL2Q6ZNJ1 2754 aa0.25□□□□□ -2.37
PTPN12-202ENST00000407343 MYO18BQ8IUG5 2567 aa0.25□□□□□ -2.37
PTPN12-202ENST00000407343 EPG5Q9HCE0 2579 aa0.25□□□□□ -2.37
PTPN12-202ENST00000407343 STAB1Q9NY15 2570 aa0.25□□□□□ -2.37
PTPN12-202ENST00000407343 MTORP42345 2549 aa0.25□□□□□ -2.37
PTPN12-202ENST00000407343 PKD1P98161 4303 aa0.25□□□□□ -2.37
PTPN12-202ENST00000407343 ACACBO00763 2458 aa0.25□□□□□ -2.37
PTPN12-202ENST00000407343 PCLOQ9Y6V0 5065 aa0.25□□□□□ -2.37
PTPN12-202ENST00000407343 DNHD1Q96M86 4753 aa0.25□□□□□ -2.37
PTPN12-202ENST00000407343 HIVEP1P15822 2718 aa0.24□□□□□ -2.37
PTPN12-202ENST00000407343 LRRK2Q5S007 2527 aa0.24□□□□□ -2.37
PTPN12-202ENST00000407343 ANKHD1Q8IWZ3 2542 aaKnown RBP0.24□□□□□ -2.37
PTPN12-202ENST00000407343 DMBT1Q9UGM3 2413 aaPredicted RBP0.24□□□□□ -2.37
PTPN12-202ENST00000407343 DEFB124Q8NES8 71 aa0.24□□□□□ -2.37
PTPN12-202ENST00000407343 NOP10Q9NPE3 64 aaKnown RBP0.24□□□□□ -2.37
PTPN12-202ENST00000407343 MUC2Q02817 5179 aa0.24□□□□□ -2.37
PTPN12-202ENST00000407343 TGP01266 2768 aa0.24□□□□□ -2.37
PTPN12-202ENST00000407343 NEBP20929 6669 aa0.24□□□□□ -2.37
PTPN12-202ENST00000407343 MKI67P46013 3256 aaKnown RBP0.24□□□□□ -2.37
PTPN12-202ENST00000407343 SPG11Q96JI7 2443 aa0.24□□□□□ -2.37
PTPN12-202ENST00000407343 NBEAQ8NFP9 2946 aa0.24□□□□□ -2.37
PTPN12-202ENST00000407343 WDR87Q6ZQQ6 2873 aa0.24□□□□□ -2.37
PTPN12-202ENST00000407343 VCANP13611 3396 aa0.23□□□□□ -2.37
PTPN12-202ENST00000407343 DSTQ03001 7570 aaKnown RBP0.23□□□□□ -2.37
PTPN12-202ENST00000407343 EPPK1P58107 5090 aaKnown RBP0.23□□□□□ -2.37
PTPN12-202ENST00000407343 RYR2Q92736 4967 aa0.23□□□□□ -2.37
PTPN12-202ENST00000407343 SPTAN1Q13813 2472 aaKnown RBP0.23□□□□□ -2.37
PTPN12-202ENST00000407343 VPS13BQ7Z7G8 4022 aa0.23□□□□□ -2.37
PTPN12-202ENST00000407343 HSPG2P98160 4391 aa0.23□□□□□ -2.37
PTPN12-202ENST00000407343 SPRR2BP35325 72 aa0.23□□□□□ -2.37
PTPN12-202ENST00000407343 DEFB104AQ8WTQ1 72 aa0.23□□□□□ -2.37
PTPN12-202ENST00000407343 RANBP2P49792 3224 aaKnown RBP0.23□□□□□ -2.37
PTPN12-202ENST00000407343 WDFY4Q6ZS81 3184 aa0.23□□□□□ -2.37
PTPN12-202ENST00000407343 HERC1Q15751 4861 aa0.23□□□□□ -2.37
PTPN12-202ENST00000407343 RIF1Q5UIP0 2472 aaKnown RBP0.23□□□□□ -2.37
PTPN12-202ENST00000407343 DUOX1Q9NRD9 1551 aa0.23□□□□□ -2.37
PTPN12-202ENST00000407343 CEP250Q9BV73 2442 aa0.22□□□□□ -2.37
PTPN12-202ENST00000407343 KMT2CQ8NEZ4 4911 aaKnown RBP0.22□□□□□ -2.37
PTPN12-202ENST00000407343 C9orf92A6NGG3 77 aa0.22□□□□□ -2.37
PTPN12-202ENST00000407343 H3BNG1 76 aa0.22□□□□□ -2.37
PTPN12-202ENST00000407343 DEFB131AP59861 70 aa0.22□□□□□ -2.37
PTPN12-202ENST00000407343 PCNTO95613 3336 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms