RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ZFHX4Q86UP3 3567 aa1.21□□□□□ -2.22
HMGB1P13-201ENST00000406019 SACSQ9NZJ4 4579 aa1.2□□□□□ -2.22
HMGB1P13-201ENST00000406019 CCDC168Q8NDH2 2452 aa1.2□□□□□ -2.22
HMGB1P13-201ENST00000406019 CFAP54Q96N23 3096 aa1.2□□□□□ -2.22
HMGB1P13-201ENST00000406019 SETD2Q9BYW2 2564 aaPredicted RBP1.2□□□□□ -2.22
HMGB1P13-201ENST00000406019 CREBBPQ92793 2442 aa1.19□□□□□ -2.22
HMGB1P13-201ENST00000406019 COL6A5A8TX70 2615 aa1.19□□□□□ -2.22
HMGB1P13-201ENST00000406019 AKAP9Q99996 3911 aa1.19□□□□□ -2.22
HMGB1P13-201ENST00000406019 BSNQ9UPA5 3926 aa1.19□□□□□ -2.22
HMGB1P13-201ENST00000406019 NAV2Q8IVL1 2488 aa1.18□□□□□ -2.22
HMGB1P13-201ENST00000406019 PIEZO1Q92508 2521 aa1.18□□□□□ -2.22
HMGB1P13-201ENST00000406019 A0A096LNI7 61 aa1.18□□□□□ -2.22
HMGB1P13-201ENST00000406019 M0QZ58 72 aa1.18□□□□□ -2.22
HMGB1P13-201ENST00000406019 DEFB110Q30KQ9 67 aa1.18□□□□□ -2.22
HMGB1P13-201ENST00000406019 LYSTQ99698 3801 aa1.17□□□□□ -2.22
HMGB1P13-201ENST00000406019 DEFB108BQ8NET1 73 aa1.17□□□□□ -2.22
HMGB1P13-201ENST00000406019 VPS13BQ7Z7G8 4022 aa1.17□□□□□ -2.22
HMGB1P13-201ENST00000406019 KMT2AQ03164 3969 aa1.16□□□□□ -2.22
HMGB1P13-201ENST00000406019 SPINK6Q6UWN8 80 aa1.16□□□□□ -2.22
HMGB1P13-201ENST00000406019 NF1P21359 2839 aa1.16□□□□□ -2.22
HMGB1P13-201ENST00000406019 NBEAQ8NFP9 2946 aa1.16□□□□□ -2.22
HMGB1P13-201ENST00000406019 FRYLO94915 3013 aa1.16□□□□□ -2.22
HMGB1P13-201ENST00000406019 SZT2Q5T011 3432 aa1.16□□□□□ -2.22
HMGB1P13-201ENST00000406019 CEP250Q9BV73 2442 aa1.16□□□□□ -2.22
HMGB1P13-201ENST00000406019 C5orf42Q9H799 3197 aa1.16□□□□□ -2.22
HMGB1P13-201ENST00000406019 NBASA2RRP1 2371 aa1.15□□□□□ -2.22
HMGB1P13-201ENST00000406019 USP9YO00507 2555 aaPredicted RBP1.15□□□□□ -2.23
HMGB1P13-201ENST00000406019 MKI67P46013 3256 aaKnown RBP1.15□□□□□ -2.23
HMGB1P13-201ENST00000406019 WDR87Q6ZQQ6 2873 aa1.14□□□□□ -2.23
HMGB1P13-201ENST00000406019 CEP350Q5VT06 3117 aa1.14□□□□□ -2.23
HMGB1P13-201ENST00000406019 DCHS2Q6V1P9 2916 aa1.14□□□□□ -2.23
HMGB1P13-201ENST00000406019 PRKDCP78527 4128 aaKnown RBP1.14□□□□□ -2.23
HMGB1P13-201ENST00000406019 SPENQ96T58 3664 aaKnown RBP1.14□□□□□ -2.23
HMGB1P13-201ENST00000406019 TENM4Q6N022 2769 aa1.13□□□□□ -2.23
HMGB1P13-201ENST00000406019 HTTP42858 3142 aa1.13□□□□□ -2.23
HMGB1P13-201ENST00000406019 FRYQ5TBA9 3013 aa1.13□□□□□ -2.23
HMGB1P13-201ENST00000406019 TRIOO75962 3097 aa1.13□□□□□ -2.23
HMGB1P13-201ENST00000406019 TNXBP22105 4242 aa1.13□□□□□ -2.23
HMGB1P13-201ENST00000406019 H3BUX3 64 aa1.13□□□□□ -2.23
HMGB1P13-201ENST00000406019 PKHD1L1Q86WI1 4243 aa1.13□□□□□ -2.23
HMGB1P13-201ENST00000406019 BDP1A6H8Y1 2624 aa1.13□□□□□ -2.23
HMGB1P13-201ENST00000406019 ZNF469Q96JG9 3925 aaPredicted RBP1.12□□□□□ -2.23
HMGB1P13-201ENST00000406019 KRTAP2-3P0C7H8 128 aa1.12□□□□□ -2.23
HMGB1P13-201ENST00000406019 DEFB135Q30KP9 77 aa1.12□□□□□ -2.23
HMGB1P13-201ENST00000406019 KRTAP2-4Q9BYR9 128 aa1.12□□□□□ -2.23
HMGB1P13-201ENST00000406019 KRTAP2-1Q9BYU5 128 aa1.12□□□□□ -2.23
HMGB1P13-201ENST00000406019 ATMQ13315 3056 aa1.12□□□□□ -2.23
HMGB1P13-201ENST00000406019 BOD1L1Q8NFC6 3051 aa1.12□□□□□ -2.23
HMGB1P13-201ENST00000406019 DNAH2Q9P225 4427 aa1.11□□□□□ -2.23
HMGB1P13-201ENST00000406019 PRUNE2Q8WUY3 3088 aa1.11□□□□□ -2.23
HMGB1P13-201ENST00000406019 ITPR3Q14573 2671 aa1.11□□□□□ -2.23
HMGB1P13-201ENST00000406019 APC2O95996 2303 aa1.11□□□□□ -2.23
HMGB1P13-201ENST00000406019 GCN1Q92616 2671 aaKnown RBP1.11□□□□□ -2.23
HMGB1P13-201ENST00000406019 DYNC2H1Q8NCM8 4307 aaKnown RBP1.11□□□□□ -2.23
HMGB1P13-201ENST00000406019 FBN2P35556 2912 aa1.1□□□□□ -2.23
HMGB1P13-201ENST00000406019 USP24Q9UPU5 2620 aa1.1□□□□□ -2.23
HMGB1P13-201ENST00000406019 FAT2Q9NYQ8 4349 aa1.1□□□□□ -2.23
HMGB1P13-201ENST00000406019 COL7A1Q02388 2944 aa1.09□□□□□ -2.24
HMGB1P13-201ENST00000406019 DNAH3Q8TD57 4116 aa1.08□□□□□ -2.24
HMGB1P13-201ENST00000406019 COL12A1Q99715 3063 aa1.08□□□□□ -2.24
HMGB1P13-201ENST00000406019 MAP1BP46821 2468 aaKnown RBP1.08□□□□□ -2.24
HMGB1P13-201ENST00000406019 A0A096LPF7 62 aa1.08□□□□□ -2.24
HMGB1P13-201ENST00000406019 DNAH10Q8IVF4 4471 aa1.08□□□□□ -2.24
HMGB1P13-201ENST00000406019 HSPG2P98160 4391 aa1.08□□□□□ -2.24
HMGB1P13-201ENST00000406019 APCP25054 2843 aa1.07□□□□□ -2.24
HMGB1P13-201ENST00000406019 TACC2O95359 2948 aa1.07□□□□□ -2.24
HMGB1P13-201ENST00000406019 DNAH7Q8WXX0 4024 aa1.07□□□□□ -2.24
HMGB1P13-201ENST00000406019 DMXL2Q8TDJ6 3036 aa1.07□□□□□ -2.24
HMGB1P13-201ENST00000406019 DNAH12Q6ZR08 3092 aa1.07□□□□□ -2.24
HMGB1P13-201ENST00000406019 FAT3Q8TDW7 4589 aa1.06□□□□□ -2.24
HMGB1P13-201ENST00000406019 EPG5Q9HCE0 2579 aa1.06□□□□□ -2.24
HMGB1P13-201ENST00000406019 ANK3Q12955 4377 aaKnown RBP1.06□□□□□ -2.24
HMGB1P13-201ENST00000406019 DMDP11532 3685 aa1.06□□□□□ -2.24
HMGB1P13-201ENST00000406019 ITPR1Q14643 2758 aa1.06□□□□□ -2.24
HMGB1P13-201ENST00000406019 M0R2T5 61 aa1.06□□□□□ -2.24
HMGB1P13-201ENST00000406019 TNP1P09430 55 aa1.06□□□□□ -2.24
HMGB1P13-201ENST00000406019 KRTAP5-10Q6L8G5 202 aa1.06□□□□□ -2.24
HMGB1P13-201ENST00000406019 FLNCQ14315 2725 aa1.06□□□□□ -2.24
HMGB1P13-201ENST00000406019 LAMA5O15230 3695 aa1.05□□□□□ -2.24
HMGB1P13-201ENST00000406019 STAB1Q9NY15 2570 aa1.05□□□□□ -2.24
HMGB1P13-201ENST00000406019 NBEAL2Q6ZNJ1 2754 aa1.05□□□□□ -2.24
HMGB1P13-201ENST00000406019 HECTD4Q9Y4D8 3996 aa1.05□□□□□ -2.24
HMGB1P13-201ENST00000406019 CELSR3Q9NYQ7 3312 aa1.05□□□□□ -2.24
HMGB1P13-201ENST00000406019 RIF1Q5UIP0 2472 aaKnown RBP1.05□□□□□ -2.24
HMGB1P13-201ENST00000406019 APOBP04114 4563 aaKnown RBP1.05□□□□□ -2.24
HMGB1P13-201ENST00000406019 SRCAPQ6ZRS2 3230 aa1.04□□□□□ -2.24
HMGB1P13-201ENST00000406019 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
HMGB1P13-201ENST00000406019 DCHS1Q96JQ0 3298 aa1.04□□□□□ -2.24
HMGB1P13-201ENST00000406019 LRBAP50851 2863 aa1.04□□□□□ -2.24
HMGB1P13-201ENST00000406019 ZZEF1O43149 2961 aa1.04□□□□□ -2.24
HMGB1P13-201ENST00000406019 DMXL1Q9Y485 3027 aa1.04□□□□□ -2.24
HMGB1P13-201ENST00000406019 SPTBN5Q9NRC6 3674 aaKnown RBP1.04□□□□□ -2.24
HMGB1P13-201ENST00000406019 SPART-AS1P0CW21 52 aa1.04□□□□□ -2.24
HMGB1P13-201ENST00000406019 SMR3AQ99954 134 aa1.04□□□□□ -2.24
HMGB1P13-201ENST00000406019 MUC3AQ02505 3323 aa1.04□□□□□ -2.24
HMGB1P13-201ENST00000406019 FRAS1Q86XX4 4008 aa1.04□□□□□ -2.24
HMGB1P13-201ENST00000406019 HIVEP1P15822 2718 aa1.04□□□□□ -2.24
HMGB1P13-201ENST00000406019 SMG1Q96Q15 3661 aaKnown RBP1.03□□□□□ -2.24
HMGB1P13-201ENST00000406019 UTP20O75691 2785 aaKnown RBP1.03□□□□□ -2.24
HMGB1P13-201ENST00000406019 CUBNO60494 3623 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms