RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 IGSF10Q6WRI0 2623 aa6.21□□□□□ -1.42
TMF1-201ENST00000398559 KMT2BQ9UMN6 2715 aaPredicted RBP6.21□□□□□ -1.42
TMF1-201ENST00000398559 NSD1Q96L73 2696 aaPredicted RBP6.2□□□□□ -1.42
TMF1-201ENST00000398559 LRBAP50851 2863 aa6.2□□□□□ -1.42
TMF1-201ENST00000398559 COL6A3P12111 3177 aa6.18□□□□□ -1.42
TMF1-201ENST00000398559 ITPR1Q14643 2758 aa6.17□□□□□ -1.42
TMF1-201ENST00000398559 VCANP13611 3396 aa6.15□□□□□ -1.43
TMF1-201ENST00000398559 REV3LO60673 3130 aa6.14□□□□□ -1.43
TMF1-201ENST00000398559 ASH1LQ9NR48 2969 aaKnown RBP6.14□□□□□ -1.43
TMF1-201ENST00000398559 LAMA1P25391 3075 aa6.14□□□□□ -1.43
TMF1-201ENST00000398559 UTP20O75691 2785 aaKnown RBP6.13□□□□□ -1.43
TMF1-201ENST00000398559 DMXL2Q8TDJ6 3036 aa6.13□□□□□ -1.43
TMF1-201ENST00000398559 NBEAQ8NFP9 2946 aa6.1□□□□□ -1.43
TMF1-201ENST00000398559 HIVEP1P15822 2718 aa6.09□□□□□ -1.43
TMF1-201ENST00000398559 TACC2O95359 2948 aa6.07□□□□□ -1.44
TMF1-201ENST00000398559 ATMQ13315 3056 aa6.07□□□□□ -1.44
TMF1-201ENST00000398559 CFAP47Q6ZTR5 3102 aa6.07□□□□□ -1.44
TMF1-201ENST00000398559 ADGRG4Q8IZF6 3080 aa6.06□□□□□ -1.44
TMF1-201ENST00000398559 SZT2Q5T011 3432 aa6.06□□□□□ -1.44
TMF1-201ENST00000398559 TPRXLQ17RH7 258 aa6.04□□□□□ -1.44
TMF1-201ENST00000398559 BOD1L1Q8NFC6 3051 aa6.04□□□□□ -1.44
TMF1-201ENST00000398559 CRYBG3Q68DQ2 2970 aa6.02□□□□□ -1.45
TMF1-201ENST00000398559 KRTAP10-10P60014 251 aa6.02□□□□□ -1.45
TMF1-201ENST00000398559 COL12A1Q99715 3063 aa6.01□□□□□ -1.45
TMF1-201ENST00000398559 ZZEF1O43149 2961 aa5.99□□□□□ -1.45
TMF1-201ENST00000398559 FRYLO94915 3013 aa5.98□□□□□ -1.45
TMF1-201ENST00000398559 KRTAP13-3Q3SY46 172 aa5.98□□□□□ -1.45
TMF1-201ENST00000398559 KRTAP21-3Q3LHN1 58 aa5.97□□□□□ -1.45
TMF1-201ENST00000398559 PRO2289Q9P1D8 64 aa5.95□□□□□ -1.46
TMF1-201ENST00000398559 KRTAP12-2P59991 146 aa5.93□□□□□ -1.46
TMF1-201ENST00000398559 CELSR2Q9HCU4 2923 aa5.92□□□□□ -1.46
TMF1-201ENST00000398559 SPEGQ15772 3267 aa5.91□□□□□ -1.46
TMF1-201ENST00000398559 FLNCQ14315 2725 aa5.89□□□□□ -1.47
TMF1-201ENST00000398559 USP34Q70CQ2 3546 aa5.88□□□□□ -1.47
TMF1-201ENST00000398559 SPTBN5Q9NRC6 3674 aaKnown RBP5.84□□□□□ -1.47
TMF1-201ENST00000398559 NIPBLQ6KC79 2804 aaeCLIP5.84□□□□□ -1.48
TMF1-201ENST00000398559 DCHS2Q6V1P9 2916 aa5.83□□□□□ -1.48
TMF1-201ENST00000398559 TNRC18O15417 2968 aaPredicted RBP5.83□□□□□ -1.48
TMF1-201ENST00000398559 EYSQ5T1H1 3165 aa5.83□□□□□ -1.48
TMF1-201ENST00000398559 KRTAP13-4Q3LI77 160 aa5.79□□□□□ -1.48
TMF1-201ENST00000398559 TGP01266 2768 aa5.78□□□□□ -1.48
TMF1-201ENST00000398559 KRTAP12-1P59990 96 aa5.78□□□□□ -1.48
TMF1-201ENST00000398559 TENM4Q6N022 2769 aa5.78□□□□□ -1.48
TMF1-201ENST00000398559 HRNRQ86YZ3 2850 aaPredicted RBP5.76□□□□□ -1.49
TMF1-201ENST00000398559 ZANQ9Y493 2812 aa5.72□□□□□ -1.49
TMF1-201ENST00000398559 FBN2P35556 2912 aa5.7□□□□□ -1.5
TMF1-201ENST00000398559 DMXL1Q9Y485 3027 aa5.69□□□□□ -1.5
TMF1-201ENST00000398559 KRTAP3-1Q9BYR8 98 aa5.68□□□□□ -1.5
TMF1-201ENST00000398559 CELSR1Q9NYQ6 3014 aa5.68□□□□□ -1.5
TMF1-201ENST00000398559 TENM1Q9UKZ4 2725 aa5.67□□□□□ -1.5
TMF1-201ENST00000398559 NF1P21359 2839 aa5.66□□□□□ -1.5
TMF1-201ENST00000398559 LOC400499M0QZD8 3231 aa5.64□□□□□ -1.51
TMF1-201ENST00000398559 TENM2Q9NT68 2774 aa5.6□□□□□ -1.51
TMF1-201ENST00000398559 KRTAP15-1Q3LI76 137 aa5.59□□□□□ -1.51
TMF1-201ENST00000398559 MYO15AQ9UKN7 3530 aa5.59□□□□□ -1.51
TMF1-201ENST00000398559 WDFY3Q8IZQ1 3526 aa5.58□□□□□ -1.52
TMF1-201ENST00000398559 DCHS1Q96JQ0 3298 aa5.57□□□□□ -1.52
TMF1-201ENST00000398559 KRTAP10-6P60371 365 aaPredicted RBP5.54□□□□□ -1.52
TMF1-201ENST00000398559 TENM3Q9P273 2699 aa5.54□□□□□ -1.52
TMF1-201ENST00000398559 ASPMQ8IZT6 3477 aa5.52□□□□□ -1.53
TMF1-201ENST00000398559 MXRA5Q9NR99 2828 aa5.48□□□□□ -1.53
TMF1-201ENST00000398559 CSMD1Q96PZ7 3565 aa5.47□□□□□ -1.53
TMF1-201ENST00000398559 RELNP78509 3460 aa5.45□□□□□ -1.54
TMF1-201ENST00000398559 ZFHX4Q86UP3 3567 aa5.42□□□□□ -1.54
TMF1-201ENST00000398559 PDZD2O15018 2839 aa5.41□□□□□ -1.54
TMF1-201ENST00000398559 NBPF19A0A087WUL8 3843 aa5.4□□□□□ -1.55
TMF1-201ENST00000398559 INE1O15225 51 aa5.37□□□□□ -1.55
TMF1-201ENST00000398559 PKD1L1Q8TDX9 2849 aa5.36□□□□□ -1.55
TMF1-201ENST00000398559 VWFP04275 2813 aa5.35□□□□□ -1.55
TMF1-201ENST00000398559 KRTAP3-2Q9BYR7 98 aa5.32□□□□□ -1.56
TMF1-201ENST00000398559 LAMA5O15230 3695 aa5.32□□□□□ -1.56
TMF1-201ENST00000398559 KRTAP3-3Q9BYR6 98 aa5.31□□□□□ -1.56
TMF1-201ENST00000398559 KRTAP10-12P60413 245 aa5.27□□□□□ -1.57
TMF1-201ENST00000398559 CRCT1Q9UGL9 99 aa5.26□□□□□ -1.57
TMF1-201ENST00000398559 SMG1Q96Q15 3661 aaKnown RBP5.25□□□□□ -1.57
TMF1-201ENST00000398559 ANK3Q12955 4377 aaKnown RBP5.22□□□□□ -1.57
TMF1-201ENST00000398559 MT1HL1P0DM35 61 aa5.2□□□□□ -1.58
TMF1-201ENST00000398559 MEGF8Q7Z7M0 2845 aa5.18□□□□□ -1.58
TMF1-201ENST00000398559 FBN3Q75N90 2809 aa5.17□□□□□ -1.58
TMF1-201ENST00000398559 SVEP1Q4LDE5 3571 aa5.14□□□□□ -1.59
TMF1-201ENST00000398559 KRTAP12-3P60328 96 aa5.13□□□□□ -1.59
TMF1-201ENST00000398559 LCE3AQ5TA76 89 aa5.11□□□□□ -1.59
TMF1-201ENST00000398559 FBN1P35555 2871 aaKnown RBP5.09□□□□□ -1.6
TMF1-201ENST00000398559 ZFHX3Q15911 3703 aa5.06□□□□□ -1.6
TMF1-201ENST00000398559 DMDP11532 3685 aa5.06□□□□□ -1.6
TMF1-201ENST00000398559 KRTAP23-1A1A580 65 aa5.06□□□□□ -1.6
TMF1-201ENST00000398559 SPENQ96T58 3664 aaKnown RBP5.06□□□□□ -1.6
TMF1-201ENST00000398559 HUWE1Q7Z6Z7 4374 aaKnown RBP5.05□□□□□ -1.6
TMF1-201ENST00000398559 KRTAP10-4P60372 401 aaPredicted RBP5.03□□□□□ -1.6
TMF1-201ENST00000398559 CUBNO60494 3623 aa5.02□□□□□ -1.61
TMF1-201ENST00000398559 TRRAPQ9Y4A5 3859 aa5.02□□□□□ -1.61
TMF1-201ENST00000398559 LORP23490 312 aaPredicted RBP5.02□□□□□ -1.61
TMF1-201ENST00000398559 COL7A1Q02388 2944 aa5.02□□□□□ -1.61
TMF1-201ENST00000398559 SRRM2Q9UQ35 2752 aaKnown RBP5□□□□□ -1.61
TMF1-201ENST00000398559 KRTAP4-5Q9BYR2 181 aa5□□□□□ -1.61
TMF1-201ENST00000398559 OTOGQ6ZRI0 2925 aa5□□□□□ -1.61
TMF1-201ENST00000398559 CSMD2Q7Z408 3487 aa4.98□□□□□ -1.61
TMF1-201ENST00000398559 MUC3AQ02505 3323 aa4.94□□□□□ -1.62
TMF1-201ENST00000398559 ALMS1Q8TCU4 4167 aa4.91□□□□□ -1.62
TMF1-201ENST00000398559 KRTAP10-5P60370 271 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms