RNA–Protein interactions for RNA: ENST00000398004.3

SLC35E3-202, Transcript of solute carrier family 35 member E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC35E3, Length 17,791 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35E3-202ENST00000398004 PP632Q6XCG6 107 aa4.26□□□□□ -1.73
SLC35E3-202ENST00000398004 P0C880 135 aa4.25□□□□□ -1.73
SLC35E3-202ENST00000398004 SETXQ7Z333 2677 aaKnown RBP4.25□□□□□ -1.73
SLC35E3-202ENST00000398004 COL6A3P12111 3177 aa4.25□□□□□ -1.73
SLC35E3-202ENST00000398004 DNAH14Q0VDD8 3507 aa4.25□□□□□ -1.73
SLC35E3-202ENST00000398004 LAMA1P25391 3075 aa4.25□□□□□ -1.73
SLC35E3-202ENST00000398004 CELSR2Q9HCU4 2923 aa4.24□□□□□ -1.73
SLC35E3-202ENST00000398004 ZZEF1O43149 2961 aa4.23□□□□□ -1.73
SLC35E3-202ENST00000398004 TNP1P09430 55 aa4.22□□□□□ -1.73
SLC35E3-202ENST00000398004 CRYBG3Q68DQ2 2970 aa4.22□□□□□ -1.73
SLC35E3-202ENST00000398004 LAMA3Q16787 3333 aa4.22□□□□□ -1.73
SLC35E3-202ENST00000398004 TNRC18O15417 2968 aaPredicted RBP4.21□□□□□ -1.74
SLC35E3-202ENST00000398004 KRTAP13-2Q52LG2 175 aa4.2□□□□□ -1.74
SLC35E3-202ENST00000398004 ATMQ13315 3056 aa4.2□□□□□ -1.74
SLC35E3-202ENST00000398004 Q6ZRN7 208 aaPredicted RBP4.18□□□□□ -1.74
SLC35E3-202ENST00000398004 HIVEP1P15822 2718 aa4.18□□□□□ -1.74
SLC35E3-202ENST00000398004 Q5VSD8 79 aa4.17□□□□□ -1.74
SLC35E3-202ENST00000398004 ITPR2Q14571 2701 aa4.17□□□□□ -1.74
SLC35E3-202ENST00000398004 KMT2BQ9UMN6 2715 aaPredicted RBP4.17□□□□□ -1.74
SLC35E3-202ENST00000398004 CDH23Q9H251 3354 aa4.15□□□□□ -1.75
SLC35E3-202ENST00000398004 DCHS2Q6V1P9 2916 aa4.14□□□□□ -1.75
SLC35E3-202ENST00000398004 KRTAP10-8P60410 259 aa4.13□□□□□ -1.75
SLC35E3-202ENST00000398004 VCANP13611 3396 aa4.12□□□□□ -1.75
SLC35E3-202ENST00000398004 BRCA2P51587 3418 aa4.11□□□□□ -1.75
SLC35E3-202ENST00000398004 PDZD2O15018 2839 aa4.07□□□□□ -1.76
SLC35E3-202ENST00000398004 TGP01266 2768 aa4.05□□□□□ -1.76
SLC35E3-202ENST00000398004 NIPBLQ6KC79 2804 aaeCLIP4.05□□□□□ -1.76
SLC35E3-202ENST00000398004 FBN2P35556 2912 aa4.04□□□□□ -1.76
SLC35E3-202ENST00000398004 CELSR1Q9NYQ6 3014 aa4.04□□□□□ -1.76
SLC35E3-202ENST00000398004 SPEGQ15772 3267 aa4.03□□□□□ -1.76
SLC35E3-202ENST00000398004 KRTAP13-3Q3SY46 172 aa4.01□□□□□ -1.77
SLC35E3-202ENST00000398004 NF1P21359 2839 aa4□□□□□ -1.77
SLC35E3-202ENST00000398004 ZANQ9Y493 2812 aa3.99□□□□□ -1.77
SLC35E3-202ENST00000398004 TPRXLQ17RH7 258 aa3.99□□□□□ -1.77
SLC35E3-202ENST00000398004 TENM3Q9P273 2699 aa3.99□□□□□ -1.77
SLC35E3-202ENST00000398004 TENM4Q6N022 2769 aa3.97□□□□□ -1.77
SLC35E3-202ENST00000398004 KRTAP1-4P0C5Y4 121 aa3.96□□□□□ -1.78
SLC35E3-202ENST00000398004 KRTAP12-2P59991 146 aa3.95□□□□□ -1.78
SLC35E3-202ENST00000398004 SZT2Q5T011 3432 aa3.94□□□□□ -1.78
SLC35E3-202ENST00000398004 EYSQ5T1H1 3165 aa3.94□□□□□ -1.78
SLC35E3-202ENST00000398004 TENM1Q9UKZ4 2725 aa3.92□□□□□ -1.78
SLC35E3-202ENST00000398004 FLNCQ14315 2725 aa3.91□□□□□ -1.78
SLC35E3-202ENST00000398004 XP32Q5T750 250 aa3.91□□□□□ -1.78
SLC35E3-202ENST00000398004 KRTAP12-1P59990 96 aa3.88□□□□□ -1.79
SLC35E3-202ENST00000398004 KRTAP15-1Q3LI76 137 aa3.88□□□□□ -1.79
SLC35E3-202ENST00000398004 TENM2Q9NT68 2774 aa3.88□□□□□ -1.79
SLC35E3-202ENST00000398004 DCHS1Q96JQ0 3298 aa3.87□□□□□ -1.79
SLC35E3-202ENST00000398004 LOC400499M0QZD8 3231 aa3.87□□□□□ -1.79
SLC35E3-202ENST00000398004 KRTAP13-4Q3LI77 160 aa3.86□□□□□ -1.79
SLC35E3-202ENST00000398004 SRRM2Q9UQ35 2752 aaKnown RBP3.86□□□□□ -1.79
SLC35E3-202ENST00000398004 MYO15AQ9UKN7 3530 aa3.82□□□□□ -1.8
SLC35E3-202ENST00000398004 PKD1L1Q8TDX9 2849 aa3.82□□□□□ -1.8
SLC35E3-202ENST00000398004 USP34Q70CQ2 3546 aa3.81□□□□□ -1.8
SLC35E3-202ENST00000398004 SPTBN5Q9NRC6 3674 aaKnown RBP3.81□□□□□ -1.8
SLC35E3-202ENST00000398004 A0A1B0GVY2 172 aa3.81□□□□□ -1.8
SLC35E3-202ENST00000398004 INE1O15225 51 aa3.79□□□□□ -1.8
SLC35E3-202ENST00000398004 KRTAP3-1Q9BYR8 98 aa3.79□□□□□ -1.8
SLC35E3-202ENST00000398004 MXRA5Q9NR99 2828 aa3.77□□□□□ -1.81
SLC35E3-202ENST00000398004 CSMD1Q96PZ7 3565 aa3.76□□□□□ -1.81
SLC35E3-202ENST00000398004 ZFHX3Q15911 3703 aa3.76□□□□□ -1.81
SLC35E3-202ENST00000398004 PRO2289Q9P1D8 64 aa3.76□□□□□ -1.81
SLC35E3-202ENST00000398004 KRTAP10-6P60371 365 aaPredicted RBP3.75□□□□□ -1.81
SLC35E3-202ENST00000398004 KRTAP10-10P60014 251 aa3.74□□□□□ -1.81
SLC35E3-202ENST00000398004 HRNRQ86YZ3 2850 aaPredicted RBP3.73□□□□□ -1.81
SLC35E3-202ENST00000398004 ZFHX4Q86UP3 3567 aa3.71□□□□□ -1.82
SLC35E3-202ENST00000398004 MEGF8Q7Z7M0 2845 aa3.7□□□□□ -1.82
SLC35E3-202ENST00000398004 VWFP04275 2813 aa3.7□□□□□ -1.82
SLC35E3-202ENST00000398004 COL7A1Q02388 2944 aa3.7□□□□□ -1.82
SLC35E3-202ENST00000398004 WDFY3Q8IZQ1 3526 aa3.7□□□□□ -1.82
SLC35E3-202ENST00000398004 LAMA5O15230 3695 aa3.68□□□□□ -1.82
SLC35E3-202ENST00000398004 FBN3Q75N90 2809 aa3.66□□□□□ -1.82
SLC35E3-202ENST00000398004 ASPMQ8IZT6 3477 aa3.63□□□□□ -1.83
SLC35E3-202ENST00000398004 SMG1Q96Q15 3661 aaKnown RBP3.62□□□□□ -1.83
SLC35E3-202ENST00000398004 KRTAP3-2Q9BYR7 98 aa3.61□□□□□ -1.83
SLC35E3-202ENST00000398004 ALMS1Q8TCU4 4167 aa3.6□□□□□ -1.83
SLC35E3-202ENST00000398004 DMDP11532 3685 aa3.59□□□□□ -1.83
SLC35E3-202ENST00000398004 NBPF19A0A087WUL8 3843 aa3.59□□□□□ -1.84
SLC35E3-202ENST00000398004 TRRAPQ9Y4A5 3859 aa3.58□□□□□ -1.84
SLC35E3-202ENST00000398004 RELNP78509 3460 aa3.55□□□□□ -1.84
SLC35E3-202ENST00000398004 FBN1P35555 2871 aaKnown RBP3.54□□□□□ -1.84
SLC35E3-202ENST00000398004 KRTAP3-3Q9BYR6 98 aa3.53□□□□□ -1.84
SLC35E3-202ENST00000398004 AKAP9Q99996 3911 aa3.53□□□□□ -1.84
SLC35E3-202ENST00000398004 CUBNO60494 3623 aa3.52□□□□□ -1.85
SLC35E3-202ENST00000398004 KRTAP23-1A1A580 65 aa3.52□□□□□ -1.85
SLC35E3-202ENST00000398004 OTOGQ6ZRI0 2925 aa3.5□□□□□ -1.85
SLC35E3-202ENST00000398004 SVEP1Q4LDE5 3571 aa3.49□□□□□ -1.85
SLC35E3-202ENST00000398004 ANK3Q12955 4377 aaKnown RBP3.48□□□□□ -1.85
SLC35E3-202ENST00000398004 KRTAP21-3Q3LHN1 58 aa3.48□□□□□ -1.85
SLC35E3-202ENST00000398004 SPENQ96T58 3664 aaKnown RBP3.46□□□□□ -1.85
SLC35E3-202ENST00000398004 CSMD3Q7Z407 3707 aa3.43□□□□□ -1.86
SLC35E3-202ENST00000398004 VPS13CQ709C8 3753 aa3.42□□□□□ -1.86
SLC35E3-202ENST00000398004 KRTAP10-12P60413 245 aa3.36□□□□□ -1.87
SLC35E3-202ENST00000398004 DNAH1Q9P2D7 4330 aa3.36□□□□□ -1.87
SLC35E3-202ENST00000398004 MUC3AQ02505 3323 aa3.35□□□□□ -1.87
SLC35E3-202ENST00000398004 KRTAP12-3P60328 96 aa3.35□□□□□ -1.87
SLC35E3-202ENST00000398004 HUWE1Q7Z6Z7 4374 aaKnown RBP3.35□□□□□ -1.87
SLC35E3-202ENST00000398004 DNAH2Q9P225 4427 aa3.33□□□□□ -1.88
SLC35E3-202ENST00000398004 LCE3AQ5TA76 89 aa3.31□□□□□ -1.88
SLC35E3-202ENST00000398004 BSNQ9UPA5 3926 aa3.29□□□□□ -1.88
SLC35E3-202ENST00000398004 DNAH3Q8TD57 4116 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 177.9 ms