RNA–Protein interactions for RNA: ENST00000397821.7

SH3KBP1-205, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3KBP1, Length 4,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-205ENST00000397821 DCHS2Q6V1P9 2916 aa8.45□□□□□ -1.06
SH3KBP1-205ENST00000397821 ROMO1P60602 79 aa8.45□□□□□ -1.06
SH3KBP1-205ENST00000397821 KRTAP11-1Q8IUC1 163 aa8.45□□□□□ -1.06
SH3KBP1-205ENST00000397821 KRTAP7-1Q8IUC3 87 aa8.45□□□□□ -1.06
SH3KBP1-205ENST00000397821 H1FX-AS1Q4G0G2 97 aa8.45□□□□□ -1.06
SH3KBP1-205ENST00000397821 S4R3F8 94 aa8.42□□□□□ -1.06
SH3KBP1-205ENST00000397821 USP34Q70CQ2 3546 aa8.41□□□□□ -1.06
SH3KBP1-205ENST00000397821 KMT2BQ9UMN6 2715 aaPredicted RBP8.4□□□□□ -1.06
SH3KBP1-205ENST00000397821 NF1P21359 2839 aa8.38□□□□□ -1.07
SH3KBP1-205ENST00000397821 FBN2P35556 2912 aa8.36□□□□□ -1.07
SH3KBP1-205ENST00000397821 LOC400499M0QZD8 3231 aa8.35□□□□□ -1.07
SH3KBP1-205ENST00000397821 KRTAP10-2P60368 255 aa8.33□□□□□ -1.08
SH3KBP1-205ENST00000397821 A0A0A0MQY5 61 aa8.32□□□□□ -1.08
SH3KBP1-205ENST00000397821 KRTAP10-1P60331 282 aa8.32□□□□□ -1.08
SH3KBP1-205ENST00000397821 R4GN34 69 aa8.32□□□□□ -1.08
SH3KBP1-205ENST00000397821 KRTAP25-1Q3LHN0 102 aa8.29□□□□□ -1.08
SH3KBP1-205ENST00000397821 HRNRQ86YZ3 2850 aaPredicted RBP8.24□□□□□ -1.09
SH3KBP1-205ENST00000397821 CRYBG3Q68DQ2 2970 aa8.22□□□□□ -1.09
SH3KBP1-205ENST00000397821 KRTAP13-1Q8IUC0 172 aa8.21□□□□□ -1.09
SH3KBP1-205ENST00000397821 TENM4Q6N022 2769 aa8.2□□□□□ -1.1
SH3KBP1-205ENST00000397821 M0QZ58 72 aa8.19□□□□□ -1.1
SH3KBP1-205ENST00000397821 Q6ZRN7 208 aaPredicted RBP8.17□□□□□ -1.1
SH3KBP1-205ENST00000397821 WDFY3Q8IZQ1 3526 aa8.17□□□□□ -1.1
SH3KBP1-205ENST00000397821 TENM3Q9P273 2699 aa8.15□□□□□ -1.1
SH3KBP1-205ENST00000397821 KRTAP16-1A8MUX0 517 aa8.14□□□□□ -1.11
SH3KBP1-205ENST00000397821 KRTAP13-2Q52LG2 175 aa8.12□□□□□ -1.11
SH3KBP1-205ENST00000397821 NDUFAF8A1L188 74 aa8.11□□□□□ -1.11
SH3KBP1-205ENST00000397821 DCHS1Q96JQ0 3298 aa8.07□□□□□ -1.12
SH3KBP1-205ENST00000397821 MXRA5Q9NR99 2828 aa8.05□□□□□ -1.12
SH3KBP1-205ENST00000397821 M0R2T5 61 aa8.03□□□□□ -1.12
SH3KBP1-205ENST00000397821 A8MUU9 505 aa8.02□□□□□ -1.13
SH3KBP1-205ENST00000397821 Q5VSD8 79 aa8.02□□□□□ -1.13
SH3KBP1-205ENST00000397821 ASPMQ8IZT6 3477 aa8□□□□□ -1.13
SH3KBP1-205ENST00000397821 SEC61BP60468 96 aaKnown RBP7.99□□□□□ -1.13
SH3KBP1-205ENST00000397821 MUC3AQ02505 3323 aa7.99□□□□□ -1.13
SH3KBP1-205ENST00000397821 RPS29P62273 56 aaKnown RBP7.97□□□□□ -1.13
SH3KBP1-205ENST00000397821 DMDP11532 3685 aa7.96□□□□□ -1.14
SH3KBP1-205ENST00000397821 RELNP78509 3460 aa7.95□□□□□ -1.14
SH3KBP1-205ENST00000397821 PDZD2O15018 2839 aa7.95□□□□□ -1.14
SH3KBP1-205ENST00000397821 CELSR1Q9NYQ6 3014 aa7.94□□□□□ -1.14
SH3KBP1-205ENST00000397821 TGP01266 2768 aa7.94□□□□□ -1.14
SH3KBP1-205ENST00000397821 TENM1Q9UKZ4 2725 aa7.93□□□□□ -1.14
SH3KBP1-205ENST00000397821 LAMA5O15230 3695 aa7.92□□□□□ -1.14
SH3KBP1-205ENST00000397821 ZFHX4Q86UP3 3567 aa7.85□□□□□ -1.15
SH3KBP1-205ENST00000397821 H0YAA0 97 aa7.84□□□□□ -1.15
SH3KBP1-205ENST00000397821 C10orf95Q9H7T3 257 aa7.83□□□□□ -1.16
SH3KBP1-205ENST00000397821 PLAC4Q8WY50 150 aa7.83□□□□□ -1.16
SH3KBP1-205ENST00000397821 C20orf166-AS1Q96NR2 134 aa7.8□□□□□ -1.16
SH3KBP1-205ENST00000397821 PKD1L1Q8TDX9 2849 aa7.79□□□□□ -1.16
SH3KBP1-205ENST00000397821 KRTAP1-4P0C5Y4 121 aa7.71□□□□□ -1.17
SH3KBP1-205ENST00000397821 VWFP04275 2813 aa7.69□□□□□ -1.18
SH3KBP1-205ENST00000397821 CSMD1Q96PZ7 3565 aa7.65□□□□□ -1.18
SH3KBP1-205ENST00000397821 CUBNO60494 3623 aa7.64□□□□□ -1.19
SH3KBP1-205ENST00000397821 SMG1Q96Q15 3661 aaKnown RBP7.63□□□□□ -1.19
SH3KBP1-205ENST00000397821 FBN1P35555 2871 aaKnown RBP7.62□□□□□ -1.19
SH3KBP1-205ENST00000397821 TENM2Q9NT68 2774 aa7.61□□□□□ -1.19
SH3KBP1-205ENST00000397821 KRTAP13-3Q3SY46 172 aa7.61□□□□□ -1.19
SH3KBP1-205ENST00000397821 P0C880 135 aa7.6□□□□□ -1.19
SH3KBP1-205ENST00000397821 TNP1P09430 55 aa7.59□□□□□ -1.2
SH3KBP1-205ENST00000397821 KRTAP21-3Q3LHN1 58 aa7.56□□□□□ -1.2
SH3KBP1-205ENST00000397821 SRRM2Q9UQ35 2752 aaKnown RBP7.55□□□□□ -1.2
SH3KBP1-205ENST00000397821 XP32Q5T750 250 aa7.5□□□□□ -1.21
SH3KBP1-205ENST00000397821 SVEP1Q4LDE5 3571 aa7.5□□□□□ -1.21
SH3KBP1-205ENST00000397821 KRTAP10-8P60410 259 aa7.49□□□□□ -1.21
SH3KBP1-205ENST00000397821 PP632Q6XCG6 107 aa7.49□□□□□ -1.21
SH3KBP1-205ENST00000397821 OTOGQ6ZRI0 2925 aa7.47□□□□□ -1.21
SH3KBP1-205ENST00000397821 SPENQ96T58 3664 aaKnown RBP7.43□□□□□ -1.22
SH3KBP1-205ENST00000397821 BSNQ9UPA5 3926 aa7.42□□□□□ -1.22
SH3KBP1-205ENST00000397821 NBPF19A0A087WUL8 3843 aa7.41□□□□□ -1.22
SH3KBP1-205ENST00000397821 FBN3Q75N90 2809 aa7.4□□□□□ -1.22
SH3KBP1-205ENST00000397821 ANK3Q12955 4377 aaKnown RBP7.32□□□□□ -1.24
SH3KBP1-205ENST00000397821 MEGF8Q7Z7M0 2845 aa7.28□□□□□ -1.24
SH3KBP1-205ENST00000397821 KRTAP12-2P59991 146 aa7.27□□□□□ -1.25
SH3KBP1-205ENST00000397821 TPRXLQ17RH7 258 aa7.27□□□□□ -1.25
SH3KBP1-205ENST00000397821 A0A1B0GVY2 172 aa7.24□□□□□ -1.25
SH3KBP1-205ENST00000397821 COL7A1Q02388 2944 aa7.23□□□□□ -1.25
SH3KBP1-205ENST00000397821 KRTAP3-1Q9BYR8 98 aa7.21□□□□□ -1.25
SH3KBP1-205ENST00000397821 CSMD2Q7Z408 3487 aa7.21□□□□□ -1.25
SH3KBP1-205ENST00000397821 ZFHX3Q15911 3703 aa7.2□□□□□ -1.26
SH3KBP1-205ENST00000397821 KRTAP12-1P59990 96 aa7.16□□□□□ -1.26
SH3KBP1-205ENST00000397821 KRTAP13-4Q3LI77 160 aa7.08□□□□□ -1.28
SH3KBP1-205ENST00000397821 TRRAPQ9Y4A5 3859 aa7.07□□□□□ -1.28
SH3KBP1-205ENST00000397821 KRTAP10-6P60371 365 aaPredicted RBP7.04□□□□□ -1.28
SH3KBP1-205ENST00000397821 KRTAP10-10P60014 251 aa6.98□□□□□ -1.29
SH3KBP1-205ENST00000397821 VPS13CQ709C8 3753 aa6.89□□□□□ -1.31
SH3KBP1-205ENST00000397821 KRTAP15-1Q3LI76 137 aa6.85□□□□□ -1.31
SH3KBP1-205ENST00000397821 ZNF469Q96JG9 3925 aaPredicted RBP6.82□□□□□ -1.32
SH3KBP1-205ENST00000397821 KRTAP3-2Q9BYR7 98 aa6.79□□□□□ -1.32
SH3KBP1-205ENST00000397821 PRO2289Q9P1D8 64 aa6.79□□□□□ -1.32
SH3KBP1-205ENST00000397821 HUWE1Q7Z6Z7 4374 aaKnown RBP6.77□□□□□ -1.33
SH3KBP1-205ENST00000397821 KRTAP3-3Q9BYR6 98 aa6.74□□□□□ -1.33
SH3KBP1-205ENST00000397821 AKAP9Q99996 3911 aa6.71□□□□□ -1.33
SH3KBP1-205ENST00000397821 CSMD3Q7Z407 3707 aa6.58□□□□□ -1.36
SH3KBP1-205ENST00000397821 DNAH9Q9NYC9 4486 aa6.55□□□□□ -1.36
SH3KBP1-205ENST00000397821 MT1HL1P0DM35 61 aa6.46□□□□□ -1.37
SH3KBP1-205ENST00000397821 KRTAP10-4P60372 401 aaPredicted RBP6.46□□□□□ -1.38
SH3KBP1-205ENST00000397821 INE1O15225 51 aa6.43□□□□□ -1.38
SH3KBP1-205ENST00000397821 PLECQ15149 4684 aaKnown RBP6.4□□□□□ -1.39
SH3KBP1-205ENST00000397821 ALMS1Q8TCU4 4167 aa6.37□□□□□ -1.39
SH3KBP1-205ENST00000397821 DNAH1Q9P2D7 4330 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 529.6 ms