RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 APLNQ9ULZ1 77 aa10.82□□□□□ -0.68
HERPUD2-202ENST00000396081 RETNLBQ9BQ08 111 aa10.8□□□□□ -0.68
HERPUD2-202ENST00000396081 ZNF706Q9Y5V0 76 aaPredicted RBP10.8□□□□□ -0.68
HERPUD2-202ENST00000396081 LINC00483Q53H64 154 aa10.78□□□□□ -0.68
HERPUD2-202ENST00000396081 PRAC1Q96KF2 57 aa10.78□□□□□ -0.68
HERPUD2-202ENST00000396081 PSORS1C2Q9UIG4 136 aa10.78□□□□□ -0.68
HERPUD2-202ENST00000396081 NBDYA0A0U1RRE5 68 aa10.77□□□□□ -0.68
HERPUD2-202ENST00000396081 ACYP2P14621 99 aa10.77□□□□□ -0.68
HERPUD2-202ENST00000396081 SPACA4Q8TDM5 124 aa10.77□□□□□ -0.68
HERPUD2-202ENST00000396081 CIRBP-AS1Q8TBR5 109 aa10.76□□□□□ -0.69
HERPUD2-202ENST00000396081 LINC00313P59037 77 aa10.74□□□□□ -0.69
HERPUD2-202ENST00000396081 DNAH3Q8TD57 4116 aa10.74□□□□□ -0.69
HERPUD2-202ENST00000396081 C8orf87E5RJ46 101 aa10.71□□□□□ -0.69
HERPUD2-202ENST00000396081 ADM2Q7Z4H4 148 aa10.69□□□□□ -0.7
HERPUD2-202ENST00000396081 IGLV5-52A0A0A0MRZ9 124 aa10.69□□□□□ -0.7
HERPUD2-202ENST00000396081 ZNF861PO60384 105 aa10.69□□□□□ -0.7
HERPUD2-202ENST00000396081 A0A1B0GU69 56 aa10.69□□□□□ -0.7
HERPUD2-202ENST00000396081 Q6ZRN7 208 aaPredicted RBP10.68□□□□□ -0.7
HERPUD2-202ENST00000396081 C4orf48Q5BLP8 95 aa10.66□□□□□ -0.7
HERPUD2-202ENST00000396081 KRTAP13-3Q3SY46 172 aa10.66□□□□□ -0.7
HERPUD2-202ENST00000396081 DNAH7Q8WXX0 4024 aa10.63□□□□□ -0.71
HERPUD2-202ENST00000396081 RTL8CO15255 209 aa10.62□□□□□ -0.71
HERPUD2-202ENST00000396081 A0A087WTM6 91 aa10.62□□□□□ -0.71
HERPUD2-202ENST00000396081 DMAC1Q96GE9 116 aa10.61□□□□□ -0.71
HERPUD2-202ENST00000396081 FRAS1Q86XX4 4008 aa10.57□□□□□ -0.72
HERPUD2-202ENST00000396081 FAM229AH3BQW9 127 aa10.54□□□□□ -0.72
HERPUD2-202ENST00000396081 MIR22HGQ0VDD5 57 aa10.54□□□□□ -0.72
HERPUD2-202ENST00000396081 PLECQ15149 4684 aaKnown RBP10.53□□□□□ -0.72
HERPUD2-202ENST00000396081 IGKV2D-30A0A075B6S6 120 aa10.52□□□□□ -0.73
HERPUD2-202ENST00000396081 IGKV2-30P06310 120 aa10.52□□□□□ -0.73
HERPUD2-202ENST00000396081 DNAH8Q96JB1 4490 aa10.51□□□□□ -0.73
HERPUD2-202ENST00000396081 IGLV7-43P04211 117 aa10.51□□□□□ -0.73
HERPUD2-202ENST00000396081 TGP01266 2768 aa10.51□□□□□ -0.73
HERPUD2-202ENST00000396081 UQCR11O14957 56 aa10.5□□□□□ -0.73
HERPUD2-202ENST00000396081 PLA2G1BP04054 148 aaKnown RBP10.5□□□□□ -0.73
HERPUD2-202ENST00000396081 SPATA8Q6RVD6 105 aa10.5□□□□□ -0.73
HERPUD2-202ENST00000396081 NUPR2A6NF83 97 aa10.49□□□□□ -0.73
HERPUD2-202ENST00000396081 ALMS1Q8TCU4 4167 aa10.45□□□□□ -0.74
HERPUD2-202ENST00000396081 LINC01554Q52M75 96 aa10.45□□□□□ -0.74
HERPUD2-202ENST00000396081 FBN3Q75N90 2809 aa10.45□□□□□ -0.74
HERPUD2-202ENST00000396081 SSBP3-AS1Q7Z2R9 100 aa10.44□□□□□ -0.74
HERPUD2-202ENST00000396081 SPINK1P00995 79 aa10.44□□□□□ -0.74
HERPUD2-202ENST00000396081 H3BS24 57 aa10.43□□□□□ -0.74
HERPUD2-202ENST00000396081 MEGF8Q7Z7M0 2845 aa10.4□□□□□ -0.74
HERPUD2-202ENST00000396081 CSAG1Q6PB30 78 aa10.36□□□□□ -0.75
HERPUD2-202ENST00000396081 HECTD4Q9Y4D8 3996 aa10.34□□□□□ -0.75
HERPUD2-202ENST00000396081 DNAH17Q9UFH2 4485 aa10.31□□□□□ -0.76
HERPUD2-202ENST00000396081 KRTAP13-2Q52LG2 175 aa10.3□□□□□ -0.76
HERPUD2-202ENST00000396081 Q8N1X5 172 aa10.3□□□□□ -0.76
HERPUD2-202ENST00000396081 KRTAP16-1A8MUX0 517 aa10.29□□□□□ -0.76
HERPUD2-202ENST00000396081 C1orf134Q5TEV5 83 aa10.29□□□□□ -0.76
HERPUD2-202ENST00000396081 STARD9Q9P2P6 4700 aa10.28□□□□□ -0.76
HERPUD2-202ENST00000396081 DYNC2H1Q8NCM8 4307 aaKnown RBP10.28□□□□□ -0.76
HERPUD2-202ENST00000396081 KMT2AQ03164 3969 aa10.26□□□□□ -0.77
HERPUD2-202ENST00000396081 VPS13DQ5THJ4 4388 aa10.22□□□□□ -0.77
HERPUD2-202ENST00000396081 LY6G6CO95867 125 aa10.19□□□□□ -0.78
HERPUD2-202ENST00000396081 KRTAP10-2P60368 255 aa10.18□□□□□ -0.78
HERPUD2-202ENST00000396081 DNAH2Q9P225 4427 aa10.16□□□□□ -0.78
HERPUD2-202ENST00000396081 FLG2Q5D862 2391 aaPredicted RBP10.15□□□□□ -0.78
HERPUD2-202ENST00000396081 DNAH6Q9C0G6 4158 aa10.1□□□□□ -0.79
HERPUD2-202ENST00000396081 DNAH11Q96DT5 4516 aa10.08□□□□□ -0.8
HERPUD2-202ENST00000396081 TYMSOSQ8TAI1 123 aa10.07□□□□□ -0.8
HERPUD2-202ENST00000396081 Q6ZSA8 131 aa10.06□□□□□ -0.8
HERPUD2-202ENST00000396081 H0YAA0 97 aa10.05□□□□□ -0.8
HERPUD2-202ENST00000396081 KRTAP1-4P0C5Y4 121 aa10.05□□□□□ -0.8
HERPUD2-202ENST00000396081 KRTAP10-1P60331 282 aa10.03□□□□□ -0.8
HERPUD2-202ENST00000396081 PRKDCP78527 4128 aaKnown RBP10□□□□□ -0.81
HERPUD2-202ENST00000396081 LRP1BQ9NZR2 4599 aa9.99□□□□□ -0.81
HERPUD2-202ENST00000396081 A0A1B0GU33 70 aa9.98□□□□□ -0.81
HERPUD2-202ENST00000396081 A8MUU9 505 aa9.98□□□□□ -0.81
HERPUD2-202ENST00000396081 LINC00304Q8N9R0 145 aa9.96□□□□□ -0.81
HERPUD2-202ENST00000396081 C9orf92A6NGG3 77 aa9.96□□□□□ -0.82
HERPUD2-202ENST00000396081 CRIPTQ9P021 101 aa9.95□□□□□ -0.82
HERPUD2-202ENST00000396081 DNAH5Q8TE73 4624 aa9.94□□□□□ -0.82
HERPUD2-202ENST00000396081 KRTAP25-1Q3LHN0 102 aa9.93□□□□□ -0.82
HERPUD2-202ENST00000396081 H1FX-AS1Q4G0G2 97 aa9.88□□□□□ -0.83
HERPUD2-202ENST00000396081 DMBT1Q9UGM3 2413 aaPredicted RBP9.84□□□□□ -0.83
HERPUD2-202ENST00000396081 KRTAP3-1Q9BYR8 98 aa9.84□□□□□ -0.83
HERPUD2-202ENST00000396081 VPS13BQ7Z7G8 4022 aa9.83□□□□□ -0.84
HERPUD2-202ENST00000396081 K7ERS5 55 aa9.8□□□□□ -0.84
HERPUD2-202ENST00000396081 ROMO1P60602 79 aa9.8□□□□□ -0.84
HERPUD2-202ENST00000396081 COX6B2Q6YFQ2 88 aa9.71□□□□□ -0.85
HERPUD2-202ENST00000396081 SMR3BP02814 79 aaPredicted RBP9.71□□□□□ -0.85
HERPUD2-202ENST00000396081 C20orf166-AS1Q96NR2 134 aa9.69□□□□□ -0.86
HERPUD2-202ENST00000396081 A0A0D9SG42 100 aa9.63□□□□□ -0.87
HERPUD2-202ENST00000396081 RPS29P62273 56 aaKnown RBP9.63□□□□□ -0.87
HERPUD2-202ENST00000396081 P0C880 135 aa9.62□□□□□ -0.87
HERPUD2-202ENST00000396081 PKD1P98161 4303 aa9.61□□□□□ -0.87
HERPUD2-202ENST00000396081 FAT2Q9NYQ8 4349 aa9.61□□□□□ -0.87
HERPUD2-202ENST00000396081 HYDINQ4G0P3 5121 aa9.6□□□□□ -0.87
HERPUD2-202ENST00000396081 RPL37P61927 97 aaKnown RBP9.52□□□□□ -0.88
HERPUD2-202ENST00000396081 SPINT4Q6UDR6 99 aa9.51□□□□□ -0.89
HERPUD2-202ENST00000396081 PKHD1P08F94 4074 aa9.47□□□□□ -0.89
HERPUD2-202ENST00000396081 DNHD1Q96M86 4753 aa9.46□□□□□ -0.89
HERPUD2-202ENST00000396081 KRTAP13-4Q3LI77 160 aa9.46□□□□□ -0.89
HERPUD2-202ENST00000396081 KRTAP10-6P60371 365 aaPredicted RBP9.43□□□□□ -0.9
HERPUD2-202ENST00000396081 C10orf95Q9H7T3 257 aa9.43□□□□□ -0.9
HERPUD2-202ENST00000396081 FAT1Q14517 4588 aa9.43□□□□□ -0.9
HERPUD2-202ENST00000396081 TPRXLQ17RH7 258 aa9.41□□□□□ -0.9
HERPUD2-202ENST00000396081 SACSQ9NZJ4 4579 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms