RNA–Protein interactions for RNA: ENST00000394957.7

VSIR-201, Transcript of V-set immunoregulatory receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSIR, Length 4,689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIR-201ENST00000394957 DCHS2Q6V1P9 2916 aa8.76□□□□□ -1.01
VSIR-201ENST00000394957 NOTCH2NLQ7Z3S9 236 aa8.75□□□□□ -1.01
VSIR-201ENST00000394957 MYO15AQ9UKN7 3530 aa8.75□□□□□ -1.01
VSIR-201ENST00000394957 LINC00472Q9H8W2 130 aa8.73□□□□□ -1.01
VSIR-201ENST00000394957 SPRR1BP22528 89 aa8.73□□□□□ -1.01
VSIR-201ENST00000394957 KRTAP29-1A8MX34 341 aaPredicted RBP8.72□□□□□ -1.01
VSIR-201ENST00000394957 SEC61BP60468 96 aaKnown RBP8.72□□□□□ -1.01
VSIR-201ENST00000394957 Q5VSD8 79 aa8.71□□□□□ -1.02
VSIR-201ENST00000394957 Q6ZSA8 131 aa8.69□□□□□ -1.02
VSIR-201ENST00000394957 Q6ZRN7 208 aaPredicted RBP8.68□□□□□ -1.02
VSIR-201ENST00000394957 NF1P21359 2839 aa8.68□□□□□ -1.02
VSIR-201ENST00000394957 MXRA5Q9NR99 2828 aa8.65□□□□□ -1.03
VSIR-201ENST00000394957 NDUFAF8A1L188 74 aa8.64□□□□□ -1.03
VSIR-201ENST00000394957 PANO1I0J062 215 aa8.64□□□□□ -1.03
VSIR-201ENST00000394957 FBN2P35556 2912 aa8.62□□□□□ -1.03
VSIR-201ENST00000394957 Q5W150 140 aa8.62□□□□□ -1.03
VSIR-201ENST00000394957 A0A1B0GU33 70 aa8.61□□□□□ -1.03
VSIR-201ENST00000394957 PDZD2O15018 2839 aa8.6□□□□□ -1.03
VSIR-201ENST00000394957 KRTAP4-16G5E9R7 235 aaPredicted RBP8.59□□□□□ -1.04
VSIR-201ENST00000394957 MUC3AQ02505 3323 aa8.58□□□□□ -1.04
VSIR-201ENST00000394957 LINC00483Q53H64 154 aa8.57□□□□□ -1.04
VSIR-201ENST00000394957 DCHS1Q96JQ0 3298 aa8.55□□□□□ -1.04
VSIR-201ENST00000394957 C20orf166-AS1Q96NR2 134 aa8.55□□□□□ -1.04
VSIR-201ENST00000394957 TENM3Q9P273 2699 aa8.53□□□□□ -1.04
VSIR-201ENST00000394957 A8MUU9 505 aa8.51□□□□□ -1.05
VSIR-201ENST00000394957 WDFY3Q8IZQ1 3526 aa8.49□□□□□ -1.05
VSIR-201ENST00000394957 CAMK2N1Q7Z7J9 78 aa8.47□□□□□ -1.05
VSIR-201ENST00000394957 KRTAP11-1Q8IUC1 163 aa8.44□□□□□ -1.06
VSIR-201ENST00000394957 OTOGQ6ZRI0 2925 aa8.44□□□□□ -1.06
VSIR-201ENST00000394957 RELNP78509 3460 aa8.44□□□□□ -1.06
VSIR-201ENST00000394957 M0R2T5 61 aa8.44□□□□□ -1.06
VSIR-201ENST00000394957 S4R3F8 94 aa8.41□□□□□ -1.06
VSIR-201ENST00000394957 KRTAP7-1Q8IUC3 87 aa8.38□□□□□ -1.07
VSIR-201ENST00000394957 TENM1Q9UKZ4 2725 aa8.35□□□□□ -1.07
VSIR-201ENST00000394957 LAMA5O15230 3695 aa8.33□□□□□ -1.08
VSIR-201ENST00000394957 R4GN34 69 aa8.32□□□□□ -1.08
VSIR-201ENST00000394957 RPS29P62273 56 aaKnown RBP8.31□□□□□ -1.08
VSIR-201ENST00000394957 DMDP11532 3685 aa8.28□□□□□ -1.08
VSIR-201ENST00000394957 PKD1L1Q8TDX9 2849 aa8.28□□□□□ -1.08
VSIR-201ENST00000394957 KRTAP13-1Q8IUC0 172 aa8.26□□□□□ -1.09
VSIR-201ENST00000394957 CELSR1Q9NYQ6 3014 aa8.25□□□□□ -1.09
VSIR-201ENST00000394957 RPL37P61927 97 aaKnown RBP8.22□□□□□ -1.09
VSIR-201ENST00000394957 TENM2Q9NT68 2774 aa8.21□□□□□ -1.1
VSIR-201ENST00000394957 H1FX-AS1Q4G0G2 97 aa8.21□□□□□ -1.1
VSIR-201ENST00000394957 P0C880 135 aa8.18□□□□□ -1.1
VSIR-201ENST00000394957 KRTAP13-2Q52LG2 175 aa8.18□□□□□ -1.1
VSIR-201ENST00000394957 M0QZ58 72 aa8.17□□□□□ -1.1
VSIR-201ENST00000394957 ASPMQ8IZT6 3477 aa8.15□□□□□ -1.1
VSIR-201ENST00000394957 NBPF19A0A087WUL8 3843 aa8.12□□□□□ -1.11
VSIR-201ENST00000394957 VWFP04275 2813 aa8.1□□□□□ -1.11
VSIR-201ENST00000394957 FBN1P35555 2871 aaKnown RBP8.05□□□□□ -1.12
VSIR-201ENST00000394957 ZFHX4Q86UP3 3567 aa8.04□□□□□ -1.12
VSIR-201ENST00000394957 SMG1Q96Q15 3661 aaKnown RBP8.03□□□□□ -1.12
VSIR-201ENST00000394957 ZFHX3Q15911 3703 aa8.01□□□□□ -1.13
VSIR-201ENST00000394957 TGP01266 2768 aa8□□□□□ -1.13
VSIR-201ENST00000394957 A0A1B0GVY2 172 aa7.99□□□□□ -1.13
VSIR-201ENST00000394957 SRRM2Q9UQ35 2752 aaKnown RBP7.98□□□□□ -1.13
VSIR-201ENST00000394957 ANK3Q12955 4377 aaKnown RBP7.97□□□□□ -1.13
VSIR-201ENST00000394957 KRTAP1-4P0C5Y4 121 aa7.97□□□□□ -1.13
VSIR-201ENST00000394957 H0YAA0 97 aa7.95□□□□□ -1.14
VSIR-201ENST00000394957 PLAC4Q8WY50 150 aa7.86□□□□□ -1.15
VSIR-201ENST00000394957 KRTAP15-1Q3LI76 137 aa7.8□□□□□ -1.16
VSIR-201ENST00000394957 BSNQ9UPA5 3926 aa7.79□□□□□ -1.16
VSIR-201ENST00000394957 CSMD1Q96PZ7 3565 aa7.78□□□□□ -1.16
VSIR-201ENST00000394957 C10orf95Q9H7T3 257 aa7.77□□□□□ -1.17
VSIR-201ENST00000394957 TPRXLQ17RH7 258 aa7.76□□□□□ -1.17
VSIR-201ENST00000394957 FBN3Q75N90 2809 aa7.75□□□□□ -1.17
VSIR-201ENST00000394957 SPENQ96T58 3664 aaKnown RBP7.74□□□□□ -1.17
VSIR-201ENST00000394957 CSMD2Q7Z408 3487 aa7.73□□□□□ -1.17
VSIR-201ENST00000394957 KRTAP10-8P60410 259 aa7.72□□□□□ -1.17
VSIR-201ENST00000394957 XP32Q5T750 250 aa7.7□□□□□ -1.18
VSIR-201ENST00000394957 KRTAP13-3Q3SY46 172 aa7.69□□□□□ -1.18
VSIR-201ENST00000394957 CUBNO60494 3623 aa7.63□□□□□ -1.19
VSIR-201ENST00000394957 TRRAPQ9Y4A5 3859 aa7.59□□□□□ -1.19
VSIR-201ENST00000394957 SVEP1Q4LDE5 3571 aa7.53□□□□□ -1.2
VSIR-201ENST00000394957 TNP1P09430 55 aa7.51□□□□□ -1.21
VSIR-201ENST00000394957 COL7A1Q02388 2944 aa7.49□□□□□ -1.21
VSIR-201ENST00000394957 MEGF8Q7Z7M0 2845 aa7.43□□□□□ -1.22
VSIR-201ENST00000394957 PP632Q6XCG6 107 aa7.33□□□□□ -1.24
VSIR-201ENST00000394957 HUWE1Q7Z6Z7 4374 aaKnown RBP7.32□□□□□ -1.24
VSIR-201ENST00000394957 AKAP9Q99996 3911 aa7.31□□□□□ -1.24
VSIR-201ENST00000394957 PRO2289Q9P1D8 64 aa7.3□□□□□ -1.24
VSIR-201ENST00000394957 KRTAP10-10P60014 251 aa7.26□□□□□ -1.25
VSIR-201ENST00000394957 MT1HL1P0DM35 61 aa7.24□□□□□ -1.25
VSIR-201ENST00000394957 ZNF469Q96JG9 3925 aaPredicted RBP7.22□□□□□ -1.25
VSIR-201ENST00000394957 KRTAP10-4P60372 401 aaPredicted RBP7.2□□□□□ -1.26
VSIR-201ENST00000394957 DNAH9Q9NYC9 4486 aa7.17□□□□□ -1.26
VSIR-201ENST00000394957 ALMS1Q8TCU4 4167 aa7.16□□□□□ -1.26
VSIR-201ENST00000394957 INE1O15225 51 aa7.13□□□□□ -1.27
VSIR-201ENST00000394957 KRTAP4-5Q9BYR2 181 aa7.11□□□□□ -1.27
VSIR-201ENST00000394957 DNHD1Q96M86 4753 aa7.11□□□□□ -1.27
VSIR-201ENST00000394957 KRTAP12-2P59991 146 aa7.09□□□□□ -1.28
VSIR-201ENST00000394957 VPS13CQ709C8 3753 aa7.08□□□□□ -1.28
VSIR-201ENST00000394957 KRTAP3-1Q9BYR8 98 aa7.04□□□□□ -1.28
VSIR-201ENST00000394957 KRTAP12-1P59990 96 aa7□□□□□ -1.29
VSIR-201ENST00000394957 KRTAP13-4Q3LI77 160 aa6.95□□□□□ -1.3
VSIR-201ENST00000394957 KRTAP10-6P60371 365 aaPredicted RBP6.92□□□□□ -1.3
VSIR-201ENST00000394957 PLECQ15149 4684 aaKnown RBP6.89□□□□□ -1.31
VSIR-201ENST00000394957 DNAH5Q8TE73 4624 aa6.86□□□□□ -1.31
VSIR-201ENST00000394957 DNAH11Q96DT5 4516 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms