RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 A0A0A0MQY5 61 aa9.26□□□□□ -0.93
SPOCK1-202ENST00000394945 FBN2P35556 2912 aa9.25□□□□□ -0.93
SPOCK1-202ENST00000394945 DCHS1Q96JQ0 3298 aa9.24□□□□□ -0.93
SPOCK1-202ENST00000394945 KRTAP1-5Q9BYS1 174 aa9.24□□□□□ -0.93
SPOCK1-202ENST00000394945 H1FX-AS1Q4G0G2 97 aa9.22□□□□□ -0.93
SPOCK1-202ENST00000394945 RELNP78509 3460 aa9.22□□□□□ -0.93
SPOCK1-202ENST00000394945 COX6B2Q6YFQ2 88 aa9.22□□□□□ -0.93
SPOCK1-202ENST00000394945 HRNRQ86YZ3 2850 aaPredicted RBP9.22□□□□□ -0.93
SPOCK1-202ENST00000394945 A0A087X002 238 aa9.2□□□□□ -0.94
SPOCK1-202ENST00000394945 NOTCH2NLQ7Z3S9 236 aa9.2□□□□□ -0.94
SPOCK1-202ENST00000394945 WDFY3Q8IZQ1 3526 aa9.18□□□□□ -0.94
SPOCK1-202ENST00000394945 LINC00483Q53H64 154 aa9.17□□□□□ -0.94
SPOCK1-202ENST00000394945 CAMK2N1Q7Z7J9 78 aa9.16□□□□□ -0.94
SPOCK1-202ENST00000394945 KRTAP25-1Q3LHN0 102 aa9.16□□□□□ -0.94
SPOCK1-202ENST00000394945 LAMA5O15230 3695 aa9.14□□□□□ -0.95
SPOCK1-202ENST00000394945 ASPMQ8IZT6 3477 aa9.11□□□□□ -0.95
SPOCK1-202ENST00000394945 KRTAP16-1A8MUX0 517 aa9.11□□□□□ -0.95
SPOCK1-202ENST00000394945 S4R3F8 94 aa9.1□□□□□ -0.95
SPOCK1-202ENST00000394945 PANO1I0J062 215 aa9.08□□□□□ -0.96
SPOCK1-202ENST00000394945 Q6ZSA8 131 aa9.05□□□□□ -0.96
SPOCK1-202ENST00000394945 KRTAP7-1Q8IUC3 87 aa9.05□□□□□ -0.96
SPOCK1-202ENST00000394945 MXRA5Q9NR99 2828 aa9.03□□□□□ -0.96
SPOCK1-202ENST00000394945 KRTAP11-1Q8IUC1 163 aa9.03□□□□□ -0.96
SPOCK1-202ENST00000394945 DMDP11532 3685 aa9□□□□□ -0.97
SPOCK1-202ENST00000394945 R4GN34 69 aa8.99□□□□□ -0.97
SPOCK1-202ENST00000394945 NDUFAF8A1L188 74 aa8.97□□□□□ -0.97
SPOCK1-202ENST00000394945 J3QL48 77 aa8.96□□□□□ -0.97
SPOCK1-202ENST00000394945 ZFHX4Q86UP3 3567 aa8.88□□□□□ -0.99
SPOCK1-202ENST00000394945 M0QZ58 72 aa8.85□□□□□ -0.99
SPOCK1-202ENST00000394945 A8MUU9 505 aa8.84□□□□□ -0.99
SPOCK1-202ENST00000394945 KRTAP10-1P60331 282 aa8.82□□□□□ -1
SPOCK1-202ENST00000394945 KRTAP13-1Q8IUC0 172 aa8.82□□□□□ -1
SPOCK1-202ENST00000394945 KRTAP10-2P60368 255 aa8.81□□□□□ -1
SPOCK1-202ENST00000394945 TENM3Q9P273 2699 aa8.78□□□□□ -1
SPOCK1-202ENST00000394945 CELSR1Q9NYQ6 3014 aa8.77□□□□□ -1
SPOCK1-202ENST00000394945 PKD1L1Q8TDX9 2849 aa8.76□□□□□ -1.01
SPOCK1-202ENST00000394945 TENM1Q9UKZ4 2725 aa8.7□□□□□ -1.02
SPOCK1-202ENST00000394945 FBN1P35555 2871 aaKnown RBP8.7□□□□□ -1.02
SPOCK1-202ENST00000394945 SMG1Q96Q15 3661 aaKnown RBP8.69□□□□□ -1.02
SPOCK1-202ENST00000394945 Q6ZRN7 208 aaPredicted RBP8.68□□□□□ -1.02
SPOCK1-202ENST00000394945 KRTAP13-2Q52LG2 175 aa8.67□□□□□ -1.02
SPOCK1-202ENST00000394945 OTOGQ6ZRI0 2925 aa8.66□□□□□ -1.02
SPOCK1-202ENST00000394945 C20orf166-AS1Q96NR2 134 aa8.63□□□□□ -1.03
SPOCK1-202ENST00000394945 PDZD2O15018 2839 aa8.61□□□□□ -1.03
SPOCK1-202ENST00000394945 ZFHX3Q15911 3703 aa8.6□□□□□ -1.03
SPOCK1-202ENST00000394945 PLAC4Q8WY50 150 aa8.59□□□□□ -1.04
SPOCK1-202ENST00000394945 RPS29P62273 56 aaKnown RBP8.57□□□□□ -1.04
SPOCK1-202ENST00000394945 VWFP04275 2813 aa8.56□□□□□ -1.04
SPOCK1-202ENST00000394945 H0YAA0 97 aa8.56□□□□□ -1.04
SPOCK1-202ENST00000394945 M0R2T5 61 aa8.54□□□□□ -1.04
SPOCK1-202ENST00000394945 C10orf95Q9H7T3 257 aa8.54□□□□□ -1.04
SPOCK1-202ENST00000394945 SEC61BP60468 96 aaKnown RBP8.54□□□□□ -1.04
SPOCK1-202ENST00000394945 TENM2Q9NT68 2774 aa8.52□□□□□ -1.04
SPOCK1-202ENST00000394945 NBPF19A0A087WUL8 3843 aa8.51□□□□□ -1.05
SPOCK1-202ENST00000394945 CSMD1Q96PZ7 3565 aa8.5□□□□□ -1.05
SPOCK1-202ENST00000394945 CUBNO60494 3623 aa8.48□□□□□ -1.05
SPOCK1-202ENST00000394945 Q5VSD8 79 aa8.46□□□□□ -1.05
SPOCK1-202ENST00000394945 TGP01266 2768 aa8.46□□□□□ -1.06
SPOCK1-202ENST00000394945 SVEP1Q4LDE5 3571 aa8.44□□□□□ -1.06
SPOCK1-202ENST00000394945 CSMD2Q7Z408 3487 aa8.43□□□□□ -1.06
SPOCK1-202ENST00000394945 P0C880 135 aa8.35□□□□□ -1.07
SPOCK1-202ENST00000394945 KRTAP21-3Q3LHN1 58 aa8.34□□□□□ -1.07
SPOCK1-202ENST00000394945 SRRM2Q9UQ35 2752 aaKnown RBP8.32□□□□□ -1.08
SPOCK1-202ENST00000394945 SPENQ96T58 3664 aaKnown RBP8.29□□□□□ -1.08
SPOCK1-202ENST00000394945 KRTAP13-3Q3SY46 172 aa8.25□□□□□ -1.09
SPOCK1-202ENST00000394945 TNP1P09430 55 aa8.24□□□□□ -1.09
SPOCK1-202ENST00000394945 KRTAP1-4P0C5Y4 121 aa8.22□□□□□ -1.09
SPOCK1-202ENST00000394945 PP632Q6XCG6 107 aa8.21□□□□□ -1.09
SPOCK1-202ENST00000394945 KRTAP10-8P60410 259 aa8.15□□□□□ -1.1
SPOCK1-202ENST00000394945 TRRAPQ9Y4A5 3859 aa8.03□□□□□ -1.12
SPOCK1-202ENST00000394945 BSNQ9UPA5 3926 aa8.02□□□□□ -1.13
SPOCK1-202ENST00000394945 XP32Q5T750 250 aa8.01□□□□□ -1.13
SPOCK1-202ENST00000394945 TPRXLQ17RH7 258 aa7.97□□□□□ -1.13
SPOCK1-202ENST00000394945 FBN3Q75N90 2809 aa7.94□□□□□ -1.14
SPOCK1-202ENST00000394945 KRTAP12-2P59991 146 aa7.9□□□□□ -1.15
SPOCK1-202ENST00000394945 ANK3Q12955 4377 aaKnown RBP7.86□□□□□ -1.15
SPOCK1-202ENST00000394945 COL7A1Q02388 2944 aa7.84□□□□□ -1.16
SPOCK1-202ENST00000394945 KRTAP12-1P59990 96 aa7.77□□□□□ -1.16
SPOCK1-202ENST00000394945 KRTAP3-1Q9BYR8 98 aa7.77□□□□□ -1.16
SPOCK1-202ENST00000394945 MEGF8Q7Z7M0 2845 aa7.75□□□□□ -1.17
SPOCK1-202ENST00000394945 A0A1B0GVY2 172 aa7.69□□□□□ -1.18
SPOCK1-202ENST00000394945 KRTAP13-4Q3LI77 160 aa7.66□□□□□ -1.18
SPOCK1-202ENST00000394945 VPS13CQ709C8 3753 aa7.63□□□□□ -1.19
SPOCK1-202ENST00000394945 KRTAP10-6P60371 365 aaPredicted RBP7.62□□□□□ -1.19
SPOCK1-202ENST00000394945 KRTAP15-1Q3LI76 137 aa7.59□□□□□ -1.19
SPOCK1-202ENST00000394945 ZNF469Q96JG9 3925 aaPredicted RBP7.58□□□□□ -1.2
SPOCK1-202ENST00000394945 KRTAP10-10P60014 251 aa7.41□□□□□ -1.22
SPOCK1-202ENST00000394945 KRTAP3-2Q9BYR7 98 aa7.34□□□□□ -1.23
SPOCK1-202ENST00000394945 CSMD3Q7Z407 3707 aa7.3□□□□□ -1.24
SPOCK1-202ENST00000394945 PRO2289Q9P1D8 64 aa7.29□□□□□ -1.24
SPOCK1-202ENST00000394945 KRTAP3-3Q9BYR6 98 aa7.26□□□□□ -1.25
SPOCK1-202ENST00000394945 HUWE1Q7Z6Z7 4374 aaKnown RBP7.24□□□□□ -1.25
SPOCK1-202ENST00000394945 AKAP9Q99996 3911 aa7.23□□□□□ -1.25
SPOCK1-202ENST00000394945 DNHD1Q96M86 4753 aa7.2□□□□□ -1.26
SPOCK1-202ENST00000394945 INE1O15225 51 aa7.18□□□□□ -1.26
SPOCK1-202ENST00000394945 MT1HL1P0DM35 61 aa7.04□□□□□ -1.28
SPOCK1-202ENST00000394945 DNAH9Q9NYC9 4486 aa7.03□□□□□ -1.28
SPOCK1-202ENST00000394945 KRTAP4-5Q9BYR2 181 aa7.01□□□□□ -1.29
SPOCK1-202ENST00000394945 KRTAP10-4P60372 401 aaPredicted RBP6.98□□□□□ -1.29
SPOCK1-202ENST00000394945 PLECQ15149 4684 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms