RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 SPENQ96T58 3664 aaKnown RBP1.14□□□□□ -2.23
PTPRC-205ENST00000391970 DCHS1Q96JQ0 3298 aa1.14□□□□□ -2.23
PTPRC-205ENST00000391970 DOPEY2Q9Y3R5 2298 aa1.14□□□□□ -2.23
PTPRC-205ENST00000391970 BRCA2P51587 3418 aa1.14□□□□□ -2.23
PTPRC-205ENST00000391970 EYSQ5T1H1 3165 aa1.14□□□□□ -2.23
PTPRC-205ENST00000391970 G3V318 75 aa1.14□□□□□ -2.23
PTPRC-205ENST00000391970 DEFB109BQ30KR1 87 aa1.14□□□□□ -2.23
PTPRC-205ENST00000391970 DEFB119Q8N690 84 aa1.14□□□□□ -2.23
PTPRC-205ENST00000391970 USMG5Q96IX5 58 aa1.14□□□□□ -2.23
PTPRC-205ENST00000391970 DNAH1Q9P2D7 4330 aa1.14□□□□□ -2.23
PTPRC-205ENST00000391970 FSIP2Q5CZC0 6907 aa1.14□□□□□ -2.23
PTPRC-205ENST00000391970 DNAH14Q0VDD8 3507 aa1.14□□□□□ -2.23
PTPRC-205ENST00000391970 SORL1Q92673 2214 aa1.13□□□□□ -2.23
PTPRC-205ENST00000391970 NBEAL1Q6ZS30 2694 aa1.13□□□□□ -2.23
PTPRC-205ENST00000391970 REV3LO60673 3130 aa1.13□□□□□ -2.23
PTPRC-205ENST00000391970 KMT2CQ8NEZ4 4911 aaKnown RBP1.13□□□□□ -2.23
PTPRC-205ENST00000391970 FBN2P35556 2912 aa1.13□□□□□ -2.23
PTPRC-205ENST00000391970 SPTBN1Q01082 2364 aaKnown RBP1.13□□□□□ -2.23
PTPRC-205ENST00000391970 ZDBF2Q9HCK1 2354 aa1.13□□□□□ -2.23
PTPRC-205ENST00000391970 NBPF19A0A087WUL8 3843 aa1.13□□□□□ -2.23
PTPRC-205ENST00000391970 C10orf99Q6UWK7 81 aa1.13□□□□□ -2.23
PTPRC-205ENST00000391970 Q6ZRN7 208 aaPredicted RBP1.13□□□□□ -2.23
PTPRC-205ENST00000391970 WFDC13Q8IUB5 93 aa1.13□□□□□ -2.23
PTPRC-205ENST00000391970 DSTQ03001 7570 aaKnown RBP1.13□□□□□ -2.23
PTPRC-205ENST00000391970 ABCA1O95477 2261 aa1.13□□□□□ -2.23
PTPRC-205ENST00000391970 ABCA4P78363 2273 aa1.13□□□□□ -2.23
PTPRC-205ENST00000391970 VPS13DQ5THJ4 4388 aa1.12□□□□□ -2.23
PTPRC-205ENST00000391970 FREM2Q5SZK8 3169 aa1.12□□□□□ -2.23
PTPRC-205ENST00000391970 SMG1Q96Q15 3661 aaKnown RBP1.12□□□□□ -2.23
PTPRC-205ENST00000391970 ZANQ9Y493 2812 aa1.12□□□□□ -2.23
PTPRC-205ENST00000391970 CELSR1Q9NYQ6 3014 aa1.12□□□□□ -2.23
PTPRC-205ENST00000391970 PIEZO2Q9H5I5 2752 aa1.12□□□□□ -2.23
PTPRC-205ENST00000391970 H3BUX3 64 aa1.12□□□□□ -2.23
PTPRC-205ENST00000391970 K7EIL1 84 aa1.12□□□□□ -2.23
PTPRC-205ENST00000391970 INE1O15225 51 aa1.12□□□□□ -2.23
PTPRC-205ENST00000391970 PRB1P04280 392 aa1.12□□□□□ -2.23
PTPRC-205ENST00000391970 PRB3Q04118 309 aaPredicted RBP1.12□□□□□ -2.23
PTPRC-205ENST00000391970 Q6ZSA8 131 aa1.12□□□□□ -2.23
PTPRC-205ENST00000391970 TOMM7Q9P0U1 55 aa1.12□□□□□ -2.23
PTPRC-205ENST00000391970 MAP1AP78559 2803 aaPredicted RBP1.12□□□□□ -2.23
PTPRC-205ENST00000391970 USP9YO00507 2555 aaPredicted RBP1.12□□□□□ -2.23
PTPRC-205ENST00000391970 KNL1Q8NG31 2342 aa1.12□□□□□ -2.23
PTPRC-205ENST00000391970 HTTP42858 3142 aa1.12□□□□□ -2.23
PTPRC-205ENST00000391970 LRBAP50851 2863 aa1.12□□□□□ -2.23
PTPRC-205ENST00000391970 CEP295Q9C0D2 2601 aa1.12□□□□□ -2.23
PTPRC-205ENST00000391970 PRUNE2Q8WUY3 3088 aa1.12□□□□□ -2.23
PTPRC-205ENST00000391970 WNK2Q9Y3S1 2297 aa1.12□□□□□ -2.23
PTPRC-205ENST00000391970 GVINP1Q7Z2Y8 2422 aa1.11□□□□□ -2.23
PTPRC-205ENST00000391970 LAMA1P25391 3075 aa1.11□□□□□ -2.23
PTPRC-205ENST00000391970 PKD1L1Q8TDX9 2849 aa1.11□□□□□ -2.23
PTPRC-205ENST00000391970 APELAP0DMC3 54 aa1.11□□□□□ -2.23
PTPRC-205ENST00000391970 WFDC10BQ8IUB3 73 aa1.11□□□□□ -2.23
PTPRC-205ENST00000391970 DEFB123Q8N688 67 aa1.11□□□□□ -2.23
PTPRC-205ENST00000391970 MRPL34Q9BQ48 92 aaKnown RBP1.11□□□□□ -2.23
PTPRC-205ENST00000391970 RHPN1-AS1Q9BWJ2 59 aa1.11□□□□□ -2.23
PTPRC-205ENST00000391970 HERC1Q15751 4861 aa1.11□□□□□ -2.23
PTPRC-205ENST00000391970 TRRAPQ9Y4A5 3859 aa1.11□□□□□ -2.23
PTPRC-205ENST00000391970 SPTAN1Q13813 2472 aaKnown RBP1.11□□□□□ -2.23
PTPRC-205ENST00000391970 LOC400499M0QZD8 3231 aa1.11□□□□□ -2.23
PTPRC-205ENST00000391970 CNOT1A5YKK6 2376 aaKnown RBP1.11□□□□□ -2.23
PTPRC-205ENST00000391970 TPRP12270 2363 aaKnown RBP1.11□□□□□ -2.23
PTPRC-205ENST00000391970 UBR5O95071 2799 aaPredicted RBP1.1□□□□□ -2.23
PTPRC-205ENST00000391970 ACACBO00763 2458 aa1.1□□□□□ -2.23
PTPRC-205ENST00000391970 IGF2RP11717 2491 aa1.1□□□□□ -2.23
PTPRC-205ENST00000391970 PCNX1Q96RV3 2341 aa1.1□□□□□ -2.23
PTPRC-205ENST00000391970 MUC5BQ9HC84 5762 aaPredicted RBP1.1□□□□□ -2.23
PTPRC-205ENST00000391970 SPINK13Q1W4C9 94 aa1.1□□□□□ -2.23
PTPRC-205ENST00000391970 KRTAP20-1Q3LI63 56 aa1.1□□□□□ -2.23
PTPRC-205ENST00000391970 DEFB104AQ8WTQ1 72 aa1.1□□□□□ -2.23
PTPRC-205ENST00000391970 SPTBN2O15020 2390 aa1.1□□□□□ -2.23
PTPRC-205ENST00000391970 RELNP78509 3460 aa1.09□□□□□ -2.23
PTPRC-205ENST00000391970 AHCTF1Q8WYP5 2266 aa1.09□□□□□ -2.23
PTPRC-205ENST00000391970 NSD1Q96L73 2696 aaPredicted RBP1.09□□□□□ -2.23
PTPRC-205ENST00000391970 TLN1Q9Y490 2541 aaKnown RBP1.09□□□□□ -2.23
PTPRC-205ENST00000391970 ATMQ13315 3056 aa1.09□□□□□ -2.23
PTPRC-205ENST00000391970 LYNX1P0DP58 116 aa1.09□□□□□ -2.23
PTPRC-205ENST00000391970 DEFB1P60022 68 aa1.09□□□□□ -2.23
PTPRC-205ENST00000391970 H1FX-AS1Q4G0G2 97 aa1.09□□□□□ -2.23
PTPRC-205ENST00000391970 ASPMQ8IZT6 3477 aa1.09□□□□□ -2.24
PTPRC-205ENST00000391970 COL12A1Q99715 3063 aa1.08□□□□□ -2.24
PTPRC-205ENST00000391970 DSPP15924 2871 aaKnown RBP1.08□□□□□ -2.24
PTPRC-205ENST00000391970 KRTAP21-2Q3LI59 83 aa1.08□□□□□ -2.24
PTPRC-205ENST00000391970 PLAC4Q8WY50 150 aa1.08□□□□□ -2.24
PTPRC-205ENST00000391970 UTP20O75691 2785 aaKnown RBP1.08□□□□□ -2.24
PTPRC-205ENST00000391970 LAMA5O15230 3695 aa1.08□□□□□ -2.24
PTPRC-205ENST00000391970 MYO15AQ9UKN7 3530 aa1.08□□□□□ -2.24
PTPRC-205ENST00000391970 MUC6Q6W4X9 2439 aa1.08□□□□□ -2.24
PTPRC-205ENST00000391970 FRAS1Q86XX4 4008 aa1.08□□□□□ -2.24
PTPRC-205ENST00000391970 CDH23Q9H251 3354 aa1.08□□□□□ -2.24
PTPRC-205ENST00000391970 COL6A6A6NMZ7 2263 aa1.08□□□□□ -2.24
PTPRC-205ENST00000391970 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.07□□□□□ -2.24
PTPRC-205ENST00000391970 CRYBG3Q68DQ2 2970 aa1.07□□□□□ -2.24
PTPRC-205ENST00000391970 ANK2Q01484 3957 aa1.07□□□□□ -2.24
PTPRC-205ENST00000391970 RPL37P61927 97 aaKnown RBP1.07□□□□□ -2.24
PTPRC-205ENST00000391970 UNQ6190/PRO20217Q6UXQ8 127 aa1.07□□□□□ -2.24
PTPRC-205ENST00000391970 SSBP3-AS1Q7Z2R9 100 aa1.07□□□□□ -2.24
PTPRC-205ENST00000391970 U3KQA8 63 aa1.07□□□□□ -2.24
PTPRC-205ENST00000391970 CHD9Q3L8U1 2897 aa1.07□□□□□ -2.24
PTPRC-205ENST00000391970 CEP250Q9BV73 2442 aa1.07□□□□□ -2.24
PTPRC-205ENST00000391970 ANK3Q12955 4377 aaKnown RBP1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms