RNA–Protein interactions for RNA: ENST00000384310.1

RNU6-339P-201, Transcript of RNA, U6 small nuclear 339, pseudogene, humanhuman

BASIC

Gene RNU6-339P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-339P-201ENST00000384310 HERC1Q15751 4861 aa0.07□□□□□ -2.4
RNU6-339P-201ENST00000384310 ABCA6Q8N139 1617 aa0.07□□□□□ -2.4
RNU6-339P-201ENST00000384310 C3P01024 1663 aa0.07□□□□□ -2.4
RNU6-339P-201ENST00000384310 ABCA13Q86UQ4 5058 aa0.07□□□□□ -2.4
RNU6-339P-201ENST00000384310 FLNBO75369 2602 aaKnown RBP0.06□□□□□ -2.4
RNU6-339P-201ENST00000384310 C9orf92A6NGG3 77 aa0.06□□□□□ -2.4
RNU6-339P-201ENST00000384310 EPG5Q9HCE0 2579 aa0.06□□□□□ -2.4
RNU6-339P-201ENST00000384310 ITPR3Q14573 2671 aa0.06□□□□□ -2.4
RNU6-339P-201ENST00000384310 GCN1Q92616 2671 aaKnown RBP0.06□□□□□ -2.4
RNU6-339P-201ENST00000384310 LRP2P98164 4655 aa0.05□□□□□ -2.4
RNU6-339P-201ENST00000384310 CPS1P31327 1500 aa0.05□□□□□ -2.4
RNU6-339P-201ENST00000384310 IGIPA6NJ69 53 aa0.05□□□□□ -2.4
RNU6-339P-201ENST00000384310 TIMM8BQ9Y5J9 83 aaPredicted RBP0.05□□□□□ -2.4
RNU6-339P-201ENST00000384310 RYR3Q15413 4870 aa0.04□□□□□ -2.4
RNU6-339P-201ENST00000384310 H3BUA1 57 aa0.04□□□□□ -2.4
RNU6-339P-201ENST00000384310 LRP1BQ9NZR2 4599 aa0.03□□□□□ -2.4
RNU6-339P-201ENST00000384310 TNRC18O15417 2968 aaPredicted RBP0.03□□□□□ -2.4
RNU6-339P-201ENST00000384310 SPRR2AP35326 72 aa0.03□□□□□ -2.4
RNU6-339P-201ENST00000384310 COL12A1Q99715 3063 aa0.03□□□□□ -2.4
RNU6-339P-201ENST00000384310 EEA1Q15075 1411 aa0.03□□□□□ -2.41
RNU6-339P-201ENST00000384310 PRRC2CQ9Y520 2896 aaKnown RBP0.03□□□□□ -2.41
RNU6-339P-201ENST00000384310 CFAP46Q8IYW2 2715 aa0.02□□□□□ -2.41
RNU6-339P-201ENST00000384310 KRTAP6-2Q3LI66 62 aa0.02□□□□□ -2.41
RNU6-339P-201ENST00000384310 TMEM167BQ9NRX6 74 aa0.02□□□□□ -2.41
RNU6-339P-201ENST00000384310 TGP01266 2768 aa0.02□□□□□ -2.41
RNU6-339P-201ENST00000384310 ABCA10Q8WWZ4 1543 aa0.02□□□□□ -2.41
RNU6-339P-201ENST00000384310 GLI2P10070 1586 aa0.02□□□□□ -2.41
RNU6-339P-201ENST00000384310 HECTD4Q9Y4D8 3996 aa0.02□□□□□ -2.41
RNU6-339P-201ENST00000384310 EPPK1P58107 5090 aaKnown RBP0.01□□□□□ -2.41
RNU6-339P-201ENST00000384310 MAP1AP78559 2803 aaPredicted RBP0□□□□□ -2.41
RNU6-339P-201ENST00000384310 LINC00308Q8TCZ7 52 aa0□□□□□ -2.41
RNU6-339P-201ENST00000384310 PRXQ9BXM0 1461 aa0□□□□□ -2.41
RNU6-339P-201ENST00000384310 MXRA5Q9NR99 2828 aa0□□□□□ -2.41
RNU6-339P-201ENST00000384310 ITSN2Q9NZM3 1697 aa-0.01□□□□□ -2.41
RNU6-339P-201ENST00000384310 CLASP1Q7Z460 1538 aa-0.01□□□□□ -2.41
RNU6-339P-201ENST00000384310 TIAM1Q13009 1591 aa-0.02□□□□□ -2.41
RNU6-339P-201ENST00000384310 UGGT1Q9NYU2 1555 aa-0.02□□□□□ -2.41
RNU6-339P-201ENST00000384310 NBEAL1Q6ZS30 2694 aa-0.02□□□□□ -2.41
RNU6-339P-201ENST00000384310 H0YGX0 51 aa-0.02□□□□□ -2.41
RNU6-339P-201ENST00000384310 LYSTQ99698 3801 aa-0.02□□□□□ -2.41
RNU6-339P-201ENST00000384310 KIF1AQ12756 1690 aa-0.02□□□□□ -2.41
RNU6-339P-201ENST00000384310 USH2AO75445 5202 aa-0.03□□□□□ -2.41
RNU6-339P-201ENST00000384310 NIPBLQ6KC79 2804 aaeCLIP-0.04□□□□□ -2.42
RNU6-339P-201ENST00000384310 ALS2Q96Q42 1657 aa-0.05□□□□□ -2.42
RNU6-339P-201ENST00000384310 NF1P21359 2839 aa-0.05□□□□□ -2.42
RNU6-339P-201ENST00000384310 IGLV5-48A0A075B6I7 105 aa-0.05□□□□□ -2.42
RNU6-339P-201ENST00000384310 ABRACLQ9P1F3 81 aa-0.05□□□□□ -2.42
RNU6-339P-201ENST00000384310 PKD1P98161 4303 aa-0.05□□□□□ -2.42
RNU6-339P-201ENST00000384310 UTP20O75691 2785 aaKnown RBP-0.06□□□□□ -2.42
RNU6-339P-201ENST00000384310 SPRR2EP22531 72 aa-0.06□□□□□ -2.42
RNU6-339P-201ENST00000384310 NOP10Q9NPE3 64 aaKnown RBP-0.06□□□□□ -2.42
RNU6-339P-201ENST00000384310 TLN1Q9Y490 2541 aaKnown RBP-0.06□□□□□ -2.42
RNU6-339P-201ENST00000384310 NBASA2RRP1 2371 aa-0.06□□□□□ -2.42
RNU6-339P-201ENST00000384310 LY75O60449 1722 aa-0.07□□□□□ -2.42
RNU6-339P-201ENST00000384310 SRRM2Q9UQ35 2752 aaKnown RBP-0.07□□□□□ -2.42
RNU6-339P-201ENST00000384310 PKHD1P08F94 4074 aa-0.08□□□□□ -2.42
RNU6-339P-201ENST00000384310 ANKRD36CQ5JPF3 1778 aa-0.08□□□□□ -2.42
RNU6-339P-201ENST00000384310 SMIM27A0A1W2PRY6 76 aa-0.09□□□□□ -2.42
RNU6-339P-201ENST00000384310 MT1AP04731 61 aa-0.09□□□□□ -2.42
RNU6-339P-201ENST00000384310 CROCC2H7BZ55 1655 aa-0.09□□□□□ -2.42
RNU6-339P-201ENST00000384310 TOGARAM1Q9Y4F4 1720 aa-0.1□□□□□ -2.42
RNU6-339P-201ENST00000384310 SVEP1Q4LDE5 3571 aa-0.1□□□□□ -2.42
RNU6-339P-201ENST00000384310 CEP295Q9C0D2 2601 aa-0.1□□□□□ -2.42
RNU6-339P-201ENST00000384310 PLNP26678 52 aa-0.1□□□□□ -2.43
RNU6-339P-201ENST00000384310 WDR87Q6ZQQ6 2873 aa-0.11□□□□□ -2.43
RNU6-339P-201ENST00000384310 LAMA3Q16787 3333 aa-0.12□□□□□ -2.43
RNU6-339P-201ENST00000384310 TACC2O95359 2948 aa-0.12□□□□□ -2.43
RNU6-339P-201ENST00000384310 MMP24-AS1A0A0U1RRL7 71 aa-0.12□□□□□ -2.43
RNU6-339P-201ENST00000384310 DEFB110Q30KQ9 67 aa-0.12□□□□□ -2.43
RNU6-339P-201ENST00000384310 KAAG1Q9UBP8 84 aa-0.12□□□□□ -2.43
RNU6-339P-201ENST00000384310 MAST1Q9Y2H9 1570 aa-0.13□□□□□ -2.43
RNU6-339P-201ENST00000384310 ITPR2Q14571 2701 aa-0.13□□□□□ -2.43
RNU6-339P-201ENST00000384310 FLGP20930 4061 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-339P-201ENST00000384310 DMXL1Q9Y485 3027 aa-0.13□□□□□ -2.43
RNU6-339P-201ENST00000384310 TEX15Q9BXT5 2789 aa-0.14□□□□□ -2.43
RNU6-339P-201ENST00000384310 CDC42BPAQ5VT25 1732 aa-0.14□□□□□ -2.43
RNU6-339P-201ENST00000384310 FAT3Q8TDW7 4589 aa-0.14□□□□□ -2.43
RNU6-339P-201ENST00000384310 KRTAP6-1Q3LI64 71 aa-0.15□□□□□ -2.43
RNU6-339P-201ENST00000384310 AGLP35573 1532 aa-0.15□□□□□ -2.43
RNU6-339P-201ENST00000384310 EFCAB6Q5THR3 1501 aa-0.15□□□□□ -2.43
RNU6-339P-201ENST00000384310 DNAH9Q9NYC9 4486 aa-0.15□□□□□ -2.43
RNU6-339P-201ENST00000384310 WFDC10BQ8IUB3 73 aa-0.16□□□□□ -2.44
RNU6-339P-201ENST00000384310 CMC2Q9NRP2 79 aa-0.16□□□□□ -2.44
RNU6-339P-201ENST00000384310 WDFY4Q6ZS81 3184 aa-0.16□□□□□ -2.44
RNU6-339P-201ENST00000384310 KRTAP19-7Q3SYF9 63 aa-0.17□□□□□ -2.44
RNU6-339P-201ENST00000384310 SPRR2FQ96RM1 72 aa-0.17□□□□□ -2.44
RNU6-339P-201ENST00000384310 HERC2O95714 4834 aa-0.17□□□□□ -2.44
RNU6-339P-201ENST00000384310 CELSR3Q9NYQ7 3312 aa-0.18□□□□□ -2.44
RNU6-339P-201ENST00000384310 CEP290O15078 2479 aa-0.18□□□□□ -2.44
RNU6-339P-201ENST00000384310 VPS13BQ7Z7G8 4022 aa-0.18□□□□□ -2.44
RNU6-339P-201ENST00000384310 MYO9AB2RTY4 2548 aa-0.18□□□□□ -2.44
RNU6-339P-201ENST00000384310 CUBNO60494 3623 aa-0.18□□□□□ -2.44
RNU6-339P-201ENST00000384310 LAMA2P24043 3122 aaKnown RBP-0.18□□□□□ -2.44
RNU6-339P-201ENST00000384310 BIRC6Q9NR09 4857 aa-0.19□□□□□ -2.44
RNU6-339P-201ENST00000384310 TNP1P09430 55 aa-0.19□□□□□ -2.44
RNU6-339P-201ENST00000384310 ZZEF1O43149 2961 aa-0.19□□□□□ -2.44
RNU6-339P-201ENST00000384310 KALRNO60229 2985 aa-0.19□□□□□ -2.44
RNU6-339P-201ENST00000384310 PREX2Q70Z35 1606 aa-0.2□□□□□ -2.44
RNU6-339P-201ENST00000384310 TLN2Q9Y4G6 2542 aa-0.2□□□□□ -2.44
RNU6-339P-201ENST00000384310 SACSQ9NZJ4 4579 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms