RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 UNC80Q8N2C7 3258 aa10.15□□□□□ -0.79
TBC1D4-201ENST00000377625 KRTAP10-8P60410 259 aa10.14□□□□□ -0.79
TBC1D4-201ENST00000377625 KRTAP1-4P0C5Y4 121 aa10.14□□□□□ -0.79
TBC1D4-201ENST00000377625 TENM4Q6N022 2769 aa10.13□□□□□ -0.79
TBC1D4-201ENST00000377625 FLNCQ14315 2725 aa10.12□□□□□ -0.79
TBC1D4-201ENST00000377625 A0A1B0GVY2 172 aa10.12□□□□□ -0.79
TBC1D4-201ENST00000377625 ASH1LQ9NR48 2969 aaKnown RBP10.1□□□□□ -0.79
TBC1D4-201ENST00000377625 ATMQ13315 3056 aa10.1□□□□□ -0.79
TBC1D4-201ENST00000377625 PP632Q6XCG6 107 aa10.06□□□□□ -0.8
TBC1D4-201ENST00000377625 CELSR3Q9NYQ7 3312 aa10.05□□□□□ -0.8
TBC1D4-201ENST00000377625 CRYBG3Q68DQ2 2970 aa10.05□□□□□ -0.8
TBC1D4-201ENST00000377625 COL12A1Q99715 3063 aa10.04□□□□□ -0.8
TBC1D4-201ENST00000377625 LRBAP50851 2863 aa9.99□□□□□ -0.81
TBC1D4-201ENST00000377625 NIPBLQ6KC79 2804 aaeCLIP9.97□□□□□ -0.81
TBC1D4-201ENST00000377625 TPRXLQ17RH7 258 aa9.95□□□□□ -0.82
TBC1D4-201ENST00000377625 FRYLO94915 3013 aa9.92□□□□□ -0.82
TBC1D4-201ENST00000377625 LAMA1P25391 3075 aa9.92□□□□□ -0.82
TBC1D4-201ENST00000377625 H0YAA0 97 aa9.92□□□□□ -0.82
TBC1D4-201ENST00000377625 CDH23Q9H251 3354 aa9.91□□□□□ -0.82
TBC1D4-201ENST00000377625 CELSR2Q9HCU4 2923 aa9.9□□□□□ -0.82
TBC1D4-201ENST00000377625 KRTAP10-10P60014 251 aa9.9□□□□□ -0.82
TBC1D4-201ENST00000377625 ADGRG4Q8IZF6 3080 aa9.86□□□□□ -0.83
TBC1D4-201ENST00000377625 NBEAQ8NFP9 2946 aa9.81□□□□□ -0.84
TBC1D4-201ENST00000377625 P0C880 135 aa9.81□□□□□ -0.84
TBC1D4-201ENST00000377625 BOD1L1Q8NFC6 3051 aa9.79□□□□□ -0.84
TBC1D4-201ENST00000377625 PRO2289Q9P1D8 64 aa9.78□□□□□ -0.84
TBC1D4-201ENST00000377625 DCHS2Q6V1P9 2916 aa9.78□□□□□ -0.84
TBC1D4-201ENST00000377625 KRTAP13-3Q3SY46 172 aa9.78□□□□□ -0.84
TBC1D4-201ENST00000377625 ZZEF1O43149 2961 aa9.75□□□□□ -0.85
TBC1D4-201ENST00000377625 VCANP13611 3396 aa9.72□□□□□ -0.85
TBC1D4-201ENST00000377625 CFAP47Q6ZTR5 3102 aa9.71□□□□□ -0.85
TBC1D4-201ENST00000377625 COL6A3P12111 3177 aa9.7□□□□□ -0.86
TBC1D4-201ENST00000377625 TENM3Q9P273 2699 aa9.68□□□□□ -0.86
TBC1D4-201ENST00000377625 SZT2Q5T011 3432 aa9.67□□□□□ -0.86
TBC1D4-201ENST00000377625 EYSQ5T1H1 3165 aa9.66□□□□□ -0.86
TBC1D4-201ENST00000377625 TENM1Q9UKZ4 2725 aa9.64□□□□□ -0.87
TBC1D4-201ENST00000377625 DNAH14Q0VDD8 3507 aa9.58□□□□□ -0.88
TBC1D4-201ENST00000377625 ZANQ9Y493 2812 aa9.58□□□□□ -0.88
TBC1D4-201ENST00000377625 TENM2Q9NT68 2774 aa9.52□□□□□ -0.88
TBC1D4-201ENST00000377625 NF1P21359 2839 aa9.52□□□□□ -0.89
TBC1D4-201ENST00000377625 TGP01266 2768 aa9.43□□□□□ -0.9
TBC1D4-201ENST00000377625 FBN2P35556 2912 aa9.37□□□□□ -0.91
TBC1D4-201ENST00000377625 SPEGQ15772 3267 aa9.37□□□□□ -0.91
TBC1D4-201ENST00000377625 TNRC18O15417 2968 aaPredicted RBP9.37□□□□□ -0.91
TBC1D4-201ENST00000377625 HRNRQ86YZ3 2850 aaPredicted RBP9.36□□□□□ -0.91
TBC1D4-201ENST00000377625 KRTAP12-2P59991 146 aa9.36□□□□□ -0.91
TBC1D4-201ENST00000377625 USP34Q70CQ2 3546 aa9.34□□□□□ -0.91
TBC1D4-201ENST00000377625 CELSR1Q9NYQ6 3014 aa9.27□□□□□ -0.93
TBC1D4-201ENST00000377625 KRTAP13-4Q3LI77 160 aa9.24□□□□□ -0.93
TBC1D4-201ENST00000377625 PKD1L1Q8TDX9 2849 aa9.23□□□□□ -0.93
TBC1D4-201ENST00000377625 DMXL1Q9Y485 3027 aa9.21□□□□□ -0.94
TBC1D4-201ENST00000377625 KRTAP12-1P59990 96 aa9.17□□□□□ -0.94
TBC1D4-201ENST00000377625 PDZD2O15018 2839 aa9.14□□□□□ -0.95
TBC1D4-201ENST00000377625 MXRA5Q9NR99 2828 aa9.13□□□□□ -0.95
TBC1D4-201ENST00000377625 VWFP04275 2813 aa9.12□□□□□ -0.95
TBC1D4-201ENST00000377625 SPTBN5Q9NRC6 3674 aaKnown RBP9.1□□□□□ -0.95
TBC1D4-201ENST00000377625 KRTAP3-1Q9BYR8 98 aa9.06□□□□□ -0.96
TBC1D4-201ENST00000377625 LOC400499M0QZD8 3231 aa8.98□□□□□ -0.97
TBC1D4-201ENST00000377625 KRTAP15-1Q3LI76 137 aa8.97□□□□□ -0.97
TBC1D4-201ENST00000377625 MYO15AQ9UKN7 3530 aa8.94□□□□□ -0.98
TBC1D4-201ENST00000377625 KRTAP10-6P60371 365 aaPredicted RBP8.82□□□□□ -1
TBC1D4-201ENST00000377625 WDFY3Q8IZQ1 3526 aa8.8□□□□□ -1
TBC1D4-201ENST00000377625 DCHS1Q96JQ0 3298 aa8.77□□□□□ -1.01
TBC1D4-201ENST00000377625 SRRM2Q9UQ35 2752 aaKnown RBP8.74□□□□□ -1.01
TBC1D4-201ENST00000377625 RELNP78509 3460 aa8.7□□□□□ -1.02
TBC1D4-201ENST00000377625 FBN1P35555 2871 aaKnown RBP8.63□□□□□ -1.03
TBC1D4-201ENST00000377625 MT1HL1P0DM35 61 aa8.62□□□□□ -1.03
TBC1D4-201ENST00000377625 NBPF19A0A087WUL8 3843 aa8.58□□□□□ -1.04
TBC1D4-201ENST00000377625 FBN3Q75N90 2809 aa8.55□□□□□ -1.04
TBC1D4-201ENST00000377625 ZFHX4Q86UP3 3567 aa8.54□□□□□ -1.04
TBC1D4-201ENST00000377625 KRTAP10-12P60413 245 aa8.53□□□□□ -1.04
TBC1D4-201ENST00000377625 CRCT1Q9UGL9 99 aa8.51□□□□□ -1.05
TBC1D4-201ENST00000377625 MEGF8Q7Z7M0 2845 aa8.5□□□□□ -1.05
TBC1D4-201ENST00000377625 OTOGQ6ZRI0 2925 aa8.48□□□□□ -1.05
TBC1D4-201ENST00000377625 KRTAP3-2Q9BYR7 98 aa8.47□□□□□ -1.05
TBC1D4-201ENST00000377625 ASPMQ8IZT6 3477 aa8.46□□□□□ -1.05
TBC1D4-201ENST00000377625 KRTAP3-3Q9BYR6 98 aa8.45□□□□□ -1.06
TBC1D4-201ENST00000377625 ZFHX3Q15911 3703 aa8.39□□□□□ -1.07
TBC1D4-201ENST00000377625 COL7A1Q02388 2944 aa8.38□□□□□ -1.07
TBC1D4-201ENST00000377625 INE1O15225 51 aa8.37□□□□□ -1.07
TBC1D4-201ENST00000377625 KRTAP4-5Q9BYR2 181 aa8.34□□□□□ -1.07
TBC1D4-201ENST00000377625 ANK3Q12955 4377 aaKnown RBP8.32□□□□□ -1.08
TBC1D4-201ENST00000377625 KRTAP10-4P60372 401 aaPredicted RBP8.28□□□□□ -1.08
TBC1D4-201ENST00000377625 KRTAP12-3P60328 96 aa8.28□□□□□ -1.08
TBC1D4-201ENST00000377625 LAMA5O15230 3695 aa8.27□□□□□ -1.09
TBC1D4-201ENST00000377625 CSMD1Q96PZ7 3565 aa8.25□□□□□ -1.09
TBC1D4-201ENST00000377625 LCE3AQ5TA76 89 aa8.16□□□□□ -1.1
TBC1D4-201ENST00000377625 KRTAP23-1A1A580 65 aa8.09□□□□□ -1.11
TBC1D4-201ENST00000377625 TRRAPQ9Y4A5 3859 aa8.04□□□□□ -1.12
TBC1D4-201ENST00000377625 DMDP11532 3685 aa8.03□□□□□ -1.12
TBC1D4-201ENST00000377625 LORP23490 312 aaPredicted RBP8.03□□□□□ -1.12
TBC1D4-201ENST00000377625 SMG1Q96Q15 3661 aaKnown RBP8.02□□□□□ -1.13
TBC1D4-201ENST00000377625 CSMD2Q7Z408 3487 aa8□□□□□ -1.13
TBC1D4-201ENST00000377625 HUWE1Q7Z6Z7 4374 aaKnown RBP7.97□□□□□ -1.13
TBC1D4-201ENST00000377625 KRTAP8-1Q8IUC2 63 aa7.91□□□□□ -1.14
TBC1D4-201ENST00000377625 SVEP1Q4LDE5 3571 aa7.89□□□□□ -1.15
TBC1D4-201ENST00000377625 ALMS1Q8TCU4 4167 aa7.86□□□□□ -1.15
TBC1D4-201ENST00000377625 KRTAP10-5P60370 271 aa7.86□□□□□ -1.15
TBC1D4-201ENST00000377625 CUBNO60494 3623 aa7.84□□□□□ -1.15
TBC1D4-201ENST00000377625 MUC3AQ02505 3323 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms