RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 SPRR1AP35321 89 aa5.15□□□□□ -1.59
HSPG2-203ENST00000374695 TENM1Q9UKZ4 2725 aa5.15□□□□□ -1.59
HSPG2-203ENST00000374695 LINC00472Q9H8W2 130 aa5.14□□□□□ -1.59
HSPG2-203ENST00000374695 SPTBN5Q9NRC6 3674 aaKnown RBP5.13□□□□□ -1.59
HSPG2-203ENST00000374695 PLAC8Q9NZF1 115 aa5.13□□□□□ -1.59
HSPG2-203ENST00000374695 HIVEP1P15822 2718 aa5.12□□□□□ -1.59
HSPG2-203ENST00000374695 PLAC4Q8WY50 150 aa5.12□□□□□ -1.59
HSPG2-203ENST00000374695 SPRR1BP22528 89 aa5.11□□□□□ -1.59
HSPG2-203ENST00000374695 NOTCH2NLQ7Z3S9 236 aa5.11□□□□□ -1.59
HSPG2-203ENST00000374695 TENM3Q9P273 2699 aa5.09□□□□□ -1.59
HSPG2-203ENST00000374695 KRTAP10-3P60369 221 aa5.09□□□□□ -1.59
HSPG2-203ENST00000374695 M0QZ58 72 aa5.08□□□□□ -1.6
HSPG2-203ENST00000374695 KRTAP25-1Q3LHN0 102 aa5.06□□□□□ -1.6
HSPG2-203ENST00000374695 PANO1I0J062 215 aa5.04□□□□□ -1.6
HSPG2-203ENST00000374695 PDZD2O15018 2839 aa5.04□□□□□ -1.6
HSPG2-203ENST00000374695 ADM2Q7Z4H4 148 aa5.02□□□□□ -1.61
HSPG2-203ENST00000374695 KRTAP26-1Q6PEX3 210 aa5.01□□□□□ -1.61
HSPG2-203ENST00000374695 ASPMQ8IZT6 3477 aa5□□□□□ -1.61
HSPG2-203ENST00000374695 KRTAP29-1A8MX34 341 aaPredicted RBP5□□□□□ -1.61
HSPG2-203ENST00000374695 KRTAP1-3Q8IUG1 177 aa4.98□□□□□ -1.61
HSPG2-203ENST00000374695 MXRA5Q9NR99 2828 aa4.96□□□□□ -1.62
HSPG2-203ENST00000374695 Q5VSD8 79 aa4.95□□□□□ -1.62
HSPG2-203ENST00000374695 TGP01266 2768 aa4.94□□□□□ -1.62
HSPG2-203ENST00000374695 KRTAP1-1Q07627 177 aa4.94□□□□□ -1.62
HSPG2-203ENST00000374695 Q8NDZ9 215 aa4.94□□□□□ -1.62
HSPG2-203ENST00000374695 C20orf166-AS1Q96NR2 134 aa4.94□□□□□ -1.62
HSPG2-203ENST00000374695 LAMA5O15230 3695 aa4.94□□□□□ -1.62
HSPG2-203ENST00000374695 RPS29P62273 56 aaKnown RBP4.93□□□□□ -1.62
HSPG2-203ENST00000374695 MUC3AQ02505 3323 aa4.92□□□□□ -1.62
HSPG2-203ENST00000374695 PKD1L1Q8TDX9 2849 aa4.91□□□□□ -1.62
HSPG2-203ENST00000374695 NDUFAF8A1L188 74 aa4.88□□□□□ -1.63
HSPG2-203ENST00000374695 KRTAP4-16G5E9R7 235 aaPredicted RBP4.87□□□□□ -1.63
HSPG2-203ENST00000374695 SRRM2Q9UQ35 2752 aaKnown RBP4.87□□□□□ -1.63
HSPG2-203ENST00000374695 CUBNO60494 3623 aa4.87□□□□□ -1.63
HSPG2-203ENST00000374695 RELNP78509 3460 aa4.87□□□□□ -1.63
HSPG2-203ENST00000374695 TENM4Q6N022 2769 aa4.86□□□□□ -1.63
HSPG2-203ENST00000374695 A8MUU9 505 aa4.86□□□□□ -1.63
HSPG2-203ENST00000374695 CSMD1Q96PZ7 3565 aa4.85□□□□□ -1.63
HSPG2-203ENST00000374695 PP632Q6XCG6 107 aa4.83□□□□□ -1.64
HSPG2-203ENST00000374695 KRTAP10-1P60331 282 aa4.82□□□□□ -1.64
HSPG2-203ENST00000374695 HRNRQ86YZ3 2850 aaPredicted RBP4.82□□□□□ -1.64
HSPG2-203ENST00000374695 TNP1P09430 55 aa4.81□□□□□ -1.64
HSPG2-203ENST00000374695 VWFP04275 2813 aa4.81□□□□□ -1.64
HSPG2-203ENST00000374695 KRTAP1-5Q9BYS1 174 aa4.81□□□□□ -1.64
HSPG2-203ENST00000374695 SMG1Q96Q15 3661 aaKnown RBP4.81□□□□□ -1.64
HSPG2-203ENST00000374695 FBN1P35555 2871 aaKnown RBP4.8□□□□□ -1.64
HSPG2-203ENST00000374695 KRTAP11-1Q8IUC1 163 aa4.8□□□□□ -1.64
HSPG2-203ENST00000374695 C10orf95Q9H7T3 257 aa4.77□□□□□ -1.65
HSPG2-203ENST00000374695 A8MU10 97 aa4.75□□□□□ -1.65
HSPG2-203ENST00000374695 KRTAP10-2P60368 255 aa4.74□□□□□ -1.65
HSPG2-203ENST00000374695 DMDP11532 3685 aa4.72□□□□□ -1.65
HSPG2-203ENST00000374695 ZFHX3Q15911 3703 aa4.71□□□□□ -1.65
HSPG2-203ENST00000374695 OTOGQ6ZRI0 2925 aa4.67□□□□□ -1.66
HSPG2-203ENST00000374695 TENM2Q9NT68 2774 aa4.67□□□□□ -1.66
HSPG2-203ENST00000374695 Q6ZRN7 208 aaPredicted RBP4.66□□□□□ -1.66
HSPG2-203ENST00000374695 ZFHX4Q86UP3 3567 aa4.65□□□□□ -1.67
HSPG2-203ENST00000374695 COL7A1Q02388 2944 aa4.62□□□□□ -1.67
HSPG2-203ENST00000374695 SPENQ96T58 3664 aaKnown RBP4.61□□□□□ -1.67
HSPG2-203ENST00000374695 SVEP1Q4LDE5 3571 aa4.61□□□□□ -1.67
HSPG2-203ENST00000374695 KRTAP13-1Q8IUC0 172 aa4.61□□□□□ -1.67
HSPG2-203ENST00000374695 P0C880 135 aa4.6□□□□□ -1.67
HSPG2-203ENST00000374695 NBPF19A0A087WUL8 3843 aa4.58□□□□□ -1.68
HSPG2-203ENST00000374695 KRTAP13-2Q52LG2 175 aa4.57□□□□□ -1.68
HSPG2-203ENST00000374695 PRO2289Q9P1D8 64 aa4.54□□□□□ -1.68
HSPG2-203ENST00000374695 AKAP9Q99996 3911 aa4.53□□□□□ -1.68
HSPG2-203ENST00000374695 TRRAPQ9Y4A5 3859 aa4.52□□□□□ -1.69
HSPG2-203ENST00000374695 H0YAA0 97 aa4.52□□□□□ -1.69
HSPG2-203ENST00000374695 KRTAP10-8P60410 259 aa4.51□□□□□ -1.69
HSPG2-203ENST00000374695 KRTAP7-1Q8IUC3 87 aa4.49□□□□□ -1.69
HSPG2-203ENST00000374695 MEGF8Q7Z7M0 2845 aa4.45□□□□□ -1.7
HSPG2-203ENST00000374695 FBN3Q75N90 2809 aa4.44□□□□□ -1.7
HSPG2-203ENST00000374695 CSMD2Q7Z408 3487 aa4.43□□□□□ -1.7
HSPG2-203ENST00000374695 XP32Q5T750 250 aa4.41□□□□□ -1.7
HSPG2-203ENST00000374695 TPRXLQ17RH7 258 aa4.4□□□□□ -1.7
HSPG2-203ENST00000374695 BSNQ9UPA5 3926 aa4.4□□□□□ -1.71
HSPG2-203ENST00000374695 VPS13CQ709C8 3753 aa4.38□□□□□ -1.71
HSPG2-203ENST00000374695 INE1O15225 51 aa4.37□□□□□ -1.71
HSPG2-203ENST00000374695 KRTAP10-10P60014 251 aa4.31□□□□□ -1.72
HSPG2-203ENST00000374695 KRTAP21-3Q3LHN1 58 aa4.31□□□□□ -1.72
HSPG2-203ENST00000374695 KRTAP1-4P0C5Y4 121 aa4.29□□□□□ -1.72
HSPG2-203ENST00000374695 KRTAP13-3Q3SY46 172 aa4.29□□□□□ -1.72
HSPG2-203ENST00000374695 KRTAP13-4Q3LI77 160 aa4.26□□□□□ -1.73
HSPG2-203ENST00000374695 A0A1B0GVY2 172 aa4.24□□□□□ -1.73
HSPG2-203ENST00000374695 CSMD3Q7Z407 3707 aa4.22□□□□□ -1.73
HSPG2-203ENST00000374695 ALMS1Q8TCU4 4167 aa4.21□□□□□ -1.74
HSPG2-203ENST00000374695 CMYA5Q8N3K9 4069 aa4.2□□□□□ -1.74
HSPG2-203ENST00000374695 KRTAP12-2P59991 146 aa4.2□□□□□ -1.74
HSPG2-203ENST00000374695 KRTAP15-1Q3LI76 137 aa4.19□□□□□ -1.74
HSPG2-203ENST00000374695 ANK3Q12955 4377 aaKnown RBP4.16□□□□□ -1.74
HSPG2-203ENST00000374695 DNAH3Q8TD57 4116 aa4.14□□□□□ -1.75
HSPG2-203ENST00000374695 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
HSPG2-203ENST00000374695 ZNF469Q96JG9 3925 aaPredicted RBP4.12□□□□□ -1.75
HSPG2-203ENST00000374695 KRTAP12-1P59990 96 aa4.1□□□□□ -1.75
HSPG2-203ENST00000374695 DNAH7Q8WXX0 4024 aa4.07□□□□□ -1.76
HSPG2-203ENST00000374695 LYSTQ99698 3801 aa4.04□□□□□ -1.76
HSPG2-203ENST00000374695 DNAH1Q9P2D7 4330 aa4□□□□□ -1.77
HSPG2-203ENST00000374695 HECTD4Q9Y4D8 3996 aa3.99□□□□□ -1.77
HSPG2-203ENST00000374695 KRTAP10-6P60371 365 aaPredicted RBP3.92□□□□□ -1.78
HSPG2-203ENST00000374695 KRTAP10-12P60413 245 aa3.86□□□□□ -1.79
HSPG2-203ENST00000374695 ANK2Q01484 3957 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms