RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 DNAH5Q8TE73 4624 aa10.08□□□□□ -0.8
RXRB-201ENST00000374680 RETNLBQ9BQ08 111 aa10.06□□□□□ -0.8
RXRB-201ENST00000374680 CYP4F30PQ9H0H9 118 aa10.06□□□□□ -0.8
RXRB-201ENST00000374680 Q1T7F1 81 aa10.04□□□□□ -0.8
RXRB-201ENST00000374680 ALMS1Q8TCU4 4167 aa10.03□□□□□ -0.8
RXRB-201ENST00000374680 KRTAP10-1P60331 282 aa10.03□□□□□ -0.8
RXRB-201ENST00000374680 MRPL34Q9BQ48 92 aaKnown RBP10.02□□□□□ -0.81
RXRB-201ENST00000374680 CD164Q04900 197 aa10.01□□□□□ -0.81
RXRB-201ENST00000374680 A8MUN3 132 aa10□□□□□ -0.81
RXRB-201ENST00000374680 C1orf195Q5TG92 126 aa9.98□□□□□ -0.81
RXRB-201ENST00000374680 Q5W150 140 aa9.97□□□□□ -0.81
RXRB-201ENST00000374680 H3BPC8 53 aa9.96□□□□□ -0.81
RXRB-201ENST00000374680 TP53AIP1Q9HCN2 124 aa9.95□□□□□ -0.82
RXRB-201ENST00000374680 ASB16-AS1Q495Z4 193 aa9.94□□□□□ -0.82
RXRB-201ENST00000374680 V9GYY9 64 aa9.94□□□□□ -0.82
RXRB-201ENST00000374680 COA5Q86WW8 74 aa9.93□□□□□ -0.82
RXRB-201ENST00000374680 KRTAP13-2Q52LG2 175 aa9.92□□□□□ -0.82
RXRB-201ENST00000374680 SPANXA2-OT1Q8N9U9 137 aa9.92□□□□□ -0.82
RXRB-201ENST00000374680 A8MU10 97 aa9.91□□□□□ -0.82
RXRB-201ENST00000374680 VPS13BQ7Z7G8 4022 aa9.91□□□□□ -0.82
RXRB-201ENST00000374680 IGLV7-46A0A075B6I9 117 aa9.89□□□□□ -0.83
RXRB-201ENST00000374680 PRR15LQ9BU68 103 aa9.88□□□□□ -0.83
RXRB-201ENST00000374680 PKD1P98161 4303 aa9.88□□□□□ -0.83
RXRB-201ENST00000374680 SPAG11AQ6PDA7 123 aa9.87□□□□□ -0.83
RXRB-201ENST00000374680 SSBP3-AS1Q7Z2R9 100 aa9.87□□□□□ -0.83
RXRB-201ENST00000374680 PKHD1P08F94 4074 aa9.87□□□□□ -0.83
RXRB-201ENST00000374680 FAT2Q9NYQ8 4349 aa9.87□□□□□ -0.83
RXRB-201ENST00000374680 Q8N9P0 234 aaPredicted RBP9.86□□□□□ -0.83
RXRB-201ENST00000374680 SMR3BP02814 79 aaPredicted RBP9.84□□□□□ -0.83
RXRB-201ENST00000374680 LINC00313P59037 77 aa9.84□□□□□ -0.83
RXRB-201ENST00000374680 CHKB-CPT1BH3BT56 60 aa9.83□□□□□ -0.84
RXRB-201ENST00000374680 PLA2G1BP04054 148 aaKnown RBP9.82□□□□□ -0.84
RXRB-201ENST00000374680 Q5VV11 94 aa9.81□□□□□ -0.84
RXRB-201ENST00000374680 HRES1P13985 223 aa9.8□□□□□ -0.84
RXRB-201ENST00000374680 LIMD2Q9BT23 127 aa9.79□□□□□ -0.84
RXRB-201ENST00000374680 PRR26Q8N8Z3 221 aa9.79□□□□□ -0.84
RXRB-201ENST00000374680 Q6ZSA8 131 aa9.78□□□□□ -0.84
RXRB-201ENST00000374680 KRTAP1-4P0C5Y4 121 aa9.76□□□□□ -0.85
RXRB-201ENST00000374680 C4orf48Q5BLP8 95 aa9.75□□□□□ -0.85
RXRB-201ENST00000374680 TYMSOSQ8TAI1 123 aa9.74□□□□□ -0.85
RXRB-201ENST00000374680 FAT1Q14517 4588 aa9.73□□□□□ -0.85
RXRB-201ENST00000374680 LOC101927531A0A1B0GV80 90 aa9.73□□□□□ -0.85
RXRB-201ENST00000374680 PMAIP1Q13794 54 aa9.72□□□□□ -0.85
RXRB-201ENST00000374680 IGKV2D-30A0A075B6S6 120 aa9.72□□□□□ -0.85
RXRB-201ENST00000374680 IGKV2-30P06310 120 aa9.72□□□□□ -0.85
RXRB-201ENST00000374680 KRTAP13-3Q3SY46 172 aa9.71□□□□□ -0.86
RXRB-201ENST00000374680 A6NED7 52 aa9.7□□□□□ -0.86
RXRB-201ENST00000374680 C8orf87E5RJ46 101 aa9.69□□□□□ -0.86
RXRB-201ENST00000374680 SPTSSBQ8NFR3 76 aa9.69□□□□□ -0.86
RXRB-201ENST00000374680 SACSQ9NZJ4 4579 aa9.68□□□□□ -0.86
RXRB-201ENST00000374680 Q75L30 129 aa9.64□□□□□ -0.87
RXRB-201ENST00000374680 FAM229AH3BQW9 127 aa9.63□□□□□ -0.87
RXRB-201ENST00000374680 DYNC1H1Q14204 4646 aaKnown RBP9.63□□□□□ -0.87
RXRB-201ENST00000374680 SEC61GP60059 68 aa9.62□□□□□ -0.87
RXRB-201ENST00000374680 KRTAP16-1A8MUX0 517 aa9.6□□□□□ -0.87
RXRB-201ENST00000374680 LCA10Q71F78 164 aa9.6□□□□□ -0.87
RXRB-201ENST00000374680 ACYP2P14621 99 aa9.59□□□□□ -0.87
RXRB-201ENST00000374680 SPINK7P58062 85 aa9.58□□□□□ -0.88
RXRB-201ENST00000374680 C9orf92A6NGG3 77 aa9.58□□□□□ -0.88
RXRB-201ENST00000374680 LINC01558Q9Y6Z2 57 aa9.55□□□□□ -0.88
RXRB-201ENST00000374680 LINC00304Q8N9R0 145 aa9.55□□□□□ -0.88
RXRB-201ENST00000374680 SPINK1P00995 79 aa9.53□□□□□ -0.88
RXRB-201ENST00000374680 ATP11AUNQ6ZP68 121 aa9.53□□□□□ -0.88
RXRB-201ENST00000374680 Q8N1X5 172 aa9.5□□□□□ -0.89
RXRB-201ENST00000374680 CDC42SE1Q9NRR8 79 aa9.5□□□□□ -0.89
RXRB-201ENST00000374680 C7orf65Q6ZTY9 151 aa9.49□□□□□ -0.89
RXRB-201ENST00000374680 DMAC1Q96GE9 116 aa9.49□□□□□ -0.89
RXRB-201ENST00000374680 KMT2CQ8NEZ4 4911 aaKnown RBP9.47□□□□□ -0.89
RXRB-201ENST00000374680 DMBT1Q9UGM3 2413 aaPredicted RBP9.46□□□□□ -0.89
RXRB-201ENST00000374680 KTN1-AS1Q86SY8 53 aa9.46□□□□□ -0.9
RXRB-201ENST00000374680 FLG2Q5D862 2391 aaPredicted RBP9.46□□□□□ -0.9
RXRB-201ENST00000374680 APOBP04114 4563 aaKnown RBP9.41□□□□□ -0.9
RXRB-201ENST00000374680 A0A1B0GU69 56 aa9.38□□□□□ -0.91
RXRB-201ENST00000374680 A6NN06 94 aa9.38□□□□□ -0.91
RXRB-201ENST00000374680 LRP1Q07954 4544 aaKnown RBP9.37□□□□□ -0.91
RXRB-201ENST00000374680 A0A1B0GVY2 172 aa9.33□□□□□ -0.92
RXRB-201ENST00000374680 RYR2Q92736 4967 aa9.29□□□□□ -0.92
RXRB-201ENST00000374680 KRTAP10-4P60372 401 aaPredicted RBP9.28□□□□□ -0.92
RXRB-201ENST00000374680 MYCBP2O75592 4640 aa9.27□□□□□ -0.92
RXRB-201ENST00000374680 KRTAP21-3Q3LHN1 58 aa9.27□□□□□ -0.93
RXRB-201ENST00000374680 RBM12B-AS1Q9P1G2 102 aa9.26□□□□□ -0.93
RXRB-201ENST00000374680 PKHD1L1Q86WI1 4243 aa9.22□□□□□ -0.93
RXRB-201ENST00000374680 RPS29P62273 56 aaKnown RBP9.18□□□□□ -0.94
RXRB-201ENST00000374680 MIR22HGQ0VDD5 57 aa9.16□□□□□ -0.94
RXRB-201ENST00000374680 A8MUU9 505 aa9.15□□□□□ -0.94
RXRB-201ENST00000374680 C20orf166-AS1Q96NR2 134 aa9.15□□□□□ -0.95
RXRB-201ENST00000374680 UQCR11O14957 56 aa9.14□□□□□ -0.95
RXRB-201ENST00000374680 KRTAP3-1Q9BYR8 98 aa9.14□□□□□ -0.95
RXRB-201ENST00000374680 RYR3Q15413 4870 aa9.1□□□□□ -0.95
RXRB-201ENST00000374680 HSPG2P98160 4391 aa9.09□□□□□ -0.95
RXRB-201ENST00000374680 ADM2Q7Z4H4 148 aa9.09□□□□□ -0.95
RXRB-201ENST00000374680 PRAC1Q96KF2 57 aa9.09□□□□□ -0.95
RXRB-201ENST00000374680 Q5VSD8 79 aa9.09□□□□□ -0.95
RXRB-201ENST00000374680 SPATA8Q6RVD6 105 aa9.07□□□□□ -0.96
RXRB-201ENST00000374680 KIAA1109Q2LD37 5005 aa9.06□□□□□ -0.96
RXRB-201ENST00000374680 FAT3Q8TDW7 4589 aa9.06□□□□□ -0.96
RXRB-201ENST00000374680 KRTAP17-1Q9BYP8 105 aa9.04□□□□□ -0.96
RXRB-201ENST00000374680 TNXBP22105 4242 aa9.01□□□□□ -0.97
RXRB-201ENST00000374680 KRTAP10-8P60410 259 aa8.95□□□□□ -0.98
RXRB-201ENST00000374680 COX6B2Q6YFQ2 88 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms