RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 PLAC8Q9NZF1 115 aa6.66□□□□□ -1.34
PGK1-201ENST00000373316 LCA10Q71F78 164 aa6.64□□□□□ -1.35
PGK1-201ENST00000373316 KMT2AQ03164 3969 aa6.63□□□□□ -1.35
PGK1-201ENST00000373316 KRTAP26-1Q6PEX3 210 aa6.63□□□□□ -1.35
PGK1-201ENST00000373316 DNAH1Q9P2D7 4330 aa6.63□□□□□ -1.35
PGK1-201ENST00000373316 LINC01558Q9Y6Z2 57 aa6.62□□□□□ -1.35
PGK1-201ENST00000373316 CASC10Q5T4H9 136 aa6.61□□□□□ -1.35
PGK1-201ENST00000373316 MMP24-AS1A0A0U1RRL7 71 aa6.6□□□□□ -1.35
PGK1-201ENST00000373316 TNP2Q05952 138 aa6.59□□□□□ -1.35
PGK1-201ENST00000373316 LINC00472Q9H8W2 130 aa6.59□□□□□ -1.36
PGK1-201ENST00000373316 LINC00483Q53H64 154 aa6.57□□□□□ -1.36
PGK1-201ENST00000373316 Q5XG85 94 aa6.55□□□□□ -1.36
PGK1-201ENST00000373316 ASB16-AS1Q495Z4 193 aa6.54□□□□□ -1.36
PGK1-201ENST00000373316 Q8NDZ9 215 aa6.54□□□□□ -1.36
PGK1-201ENST00000373316 KRTAP4-16G5E9R7 235 aaPredicted RBP6.52□□□□□ -1.37
PGK1-201ENST00000373316 RBM12B-AS1Q9P1G2 102 aa6.51□□□□□ -1.37
PGK1-201ENST00000373316 SRRM2Q9UQ35 2752 aaKnown RBP6.51□□□□□ -1.37
PGK1-201ENST00000373316 Q8N9P0 234 aaPredicted RBP6.51□□□□□ -1.37
PGK1-201ENST00000373316 KRTAP1-5Q9BYS1 174 aa6.5□□□□□ -1.37
PGK1-201ENST00000373316 VPS13DQ5THJ4 4388 aa6.5□□□□□ -1.37
PGK1-201ENST00000373316 CRIPTQ9P021 101 aa6.49□□□□□ -1.37
PGK1-201ENST00000373316 HYDINQ4G0P3 5121 aa6.49□□□□□ -1.37
PGK1-201ENST00000373316 DNAH2Q9P225 4427 aa6.49□□□□□ -1.37
PGK1-201ENST00000373316 Q6ZR54 194 aa6.48□□□□□ -1.37
PGK1-201ENST00000373316 HRES1P13985 223 aa6.47□□□□□ -1.37
PGK1-201ENST00000373316 ZCCHC13Q8WW36 166 aaKnown RBP6.47□□□□□ -1.37
PGK1-201ENST00000373316 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.47□□□□□ -1.37
PGK1-201ENST00000373316 FRAS1Q86XX4 4008 aa6.46□□□□□ -1.37
PGK1-201ENST00000373316 A0A0G2JQZ4 141 aa6.46□□□□□ -1.38
PGK1-201ENST00000373316 FP248Q71RG6 208 aaPredicted RBP6.46□□□□□ -1.38
PGK1-201ENST00000373316 LCE6AA0A183 80 aa6.45□□□□□ -1.38
PGK1-201ENST00000373316 RPS29P62273 56 aaKnown RBP6.44□□□□□ -1.38
PGK1-201ENST00000373316 KRTAP29-1A8MX34 341 aaPredicted RBP6.43□□□□□ -1.38
PGK1-201ENST00000373316 DYNC2H1Q8NCM8 4307 aaKnown RBP6.42□□□□□ -1.38
PGK1-201ENST00000373316 DMAC1Q96GE9 116 aa6.41□□□□□ -1.38
PGK1-201ENST00000373316 DNAH6Q9C0G6 4158 aa6.4□□□□□ -1.38
PGK1-201ENST00000373316 SPINT4Q6UDR6 99 aa6.4□□□□□ -1.38
PGK1-201ENST00000373316 ANAPC11Q9NYG5 84 aa6.4□□□□□ -1.38
PGK1-201ENST00000373316 Q5W150 140 aa6.4□□□□□ -1.39
PGK1-201ENST00000373316 Q5VV11 94 aa6.39□□□□□ -1.39
PGK1-201ENST00000373316 A0A1B0GU33 70 aa6.38□□□□□ -1.39
PGK1-201ENST00000373316 CYSTM1Q9H1C7 97 aa6.37□□□□□ -1.39
PGK1-201ENST00000373316 PRR26Q8N8Z3 221 aa6.37□□□□□ -1.39
PGK1-201ENST00000373316 C9orf92A6NGG3 77 aa6.36□□□□□ -1.39
PGK1-201ENST00000373316 J3QL48 77 aa6.35□□□□□ -1.39
PGK1-201ENST00000373316 A0A087X002 238 aa6.34□□□□□ -1.39
PGK1-201ENST00000373316 HECTD4Q9Y4D8 3996 aa6.34□□□□□ -1.39
PGK1-201ENST00000373316 KMT2CQ8NEZ4 4911 aaKnown RBP6.32□□□□□ -1.4
PGK1-201ENST00000373316 Q8N1X5 172 aa6.32□□□□□ -1.4
PGK1-201ENST00000373316 DNAH11Q96DT5 4516 aa6.3□□□□□ -1.4
PGK1-201ENST00000373316 PKHD1P08F94 4074 aa6.3□□□□□ -1.4
PGK1-201ENST00000373316 OXTP01178 125 aa6.28□□□□□ -1.4
PGK1-201ENST00000373316 PANO1I0J062 215 aa6.27□□□□□ -1.41
PGK1-201ENST00000373316 Q6ZSA8 131 aa6.27□□□□□ -1.41
PGK1-201ENST00000373316 COX6B2Q6YFQ2 88 aa6.27□□□□□ -1.41
PGK1-201ENST00000373316 DNAH17Q9UFH2 4485 aa6.26□□□□□ -1.41
PGK1-201ENST00000373316 KRTAP7-1Q8IUC3 87 aa6.26□□□□□ -1.41
PGK1-201ENST00000373316 SACSQ9NZJ4 4579 aa6.26□□□□□ -1.41
PGK1-201ENST00000373316 LINC01554Q52M75 96 aa6.25□□□□□ -1.41
PGK1-201ENST00000373316 CSAG1Q6PB30 78 aa6.25□□□□□ -1.41
PGK1-201ENST00000373316 S4R3F8 94 aa6.25□□□□□ -1.41
PGK1-201ENST00000373316 KRTAP13-1Q8IUC0 172 aa6.24□□□□□ -1.41
PGK1-201ENST00000373316 SMR3BP02814 79 aaPredicted RBP6.24□□□□□ -1.41
PGK1-201ENST00000373316 DNAH8Q96JB1 4490 aa6.24□□□□□ -1.41
PGK1-201ENST00000373316 DNAH5Q8TE73 4624 aa6.23□□□□□ -1.41
PGK1-201ENST00000373316 Q6ZRN7 208 aaPredicted RBP6.22□□□□□ -1.41
PGK1-201ENST00000373316 KRTAP11-1Q8IUC1 163 aa6.22□□□□□ -1.41
PGK1-201ENST00000373316 FAT2Q9NYQ8 4349 aa6.22□□□□□ -1.41
PGK1-201ENST00000373316 SPINK7P58062 85 aa6.21□□□□□ -1.42
PGK1-201ENST00000373316 SPATA8Q6RVD6 105 aa6.21□□□□□ -1.42
PGK1-201ENST00000373316 SEC61BP60468 96 aaKnown RBP6.18□□□□□ -1.42
PGK1-201ENST00000373316 H1FX-AS1Q4G0G2 97 aa6.18□□□□□ -1.42
PGK1-201ENST00000373316 LRP1BQ9NZR2 4599 aa6.16□□□□□ -1.42
PGK1-201ENST00000373316 PKD1P98161 4303 aa6.16□□□□□ -1.42
PGK1-201ENST00000373316 KRTAP10-1P60331 282 aa6.15□□□□□ -1.42
PGK1-201ENST00000373316 RPL37P61927 97 aaKnown RBP6.15□□□□□ -1.42
PGK1-201ENST00000373316 KRTAP21-3Q3LHN1 58 aa6.15□□□□□ -1.42
PGK1-201ENST00000373316 KRTAP10-2P60368 255 aa6.15□□□□□ -1.43
PGK1-201ENST00000373316 RYR3Q15413 4870 aa6.14□□□□□ -1.43
PGK1-201ENST00000373316 LUZP6Q538Z0 58 aa6.13□□□□□ -1.43
PGK1-201ENST00000373316 ROMO1P60602 79 aa6.13□□□□□ -1.43
PGK1-201ENST00000373316 A0A0D9SG42 100 aa6.11□□□□□ -1.43
PGK1-201ENST00000373316 FAT1Q14517 4588 aa6.09□□□□□ -1.43
PGK1-201ENST00000373316 ALMS1Q8TCU4 4167 aa6.09□□□□□ -1.44
PGK1-201ENST00000373316 RYR2Q92736 4967 aa6.08□□□□□ -1.44
PGK1-201ENST00000373316 VPS13BQ7Z7G8 4022 aa6.07□□□□□ -1.44
PGK1-201ENST00000373316 A6NN06 94 aa6.07□□□□□ -1.44
PGK1-201ENST00000373316 Q5VSD8 79 aa6.04□□□□□ -1.44
PGK1-201ENST00000373316 NOTCH2NLQ7Z3S9 236 aa6.04□□□□□ -1.44
PGK1-201ENST00000373316 CAMK2N1Q7Z7J9 78 aa6.04□□□□□ -1.44
PGK1-201ENST00000373316 DYNC1H1Q14204 4646 aaKnown RBP6.03□□□□□ -1.44
PGK1-201ENST00000373316 M0QZ58 72 aa6□□□□□ -1.45
PGK1-201ENST00000373316 R4GN34 69 aa6□□□□□ -1.45
PGK1-201ENST00000373316 A8MUU9 505 aa5.97□□□□□ -1.45
PGK1-201ENST00000373316 KRTAP13-2Q52LG2 175 aa5.97□□□□□ -1.45
PGK1-201ENST00000373316 C20orf166-AS1Q96NR2 134 aa5.97□□□□□ -1.45
PGK1-201ENST00000373316 PRAC1Q96KF2 57 aa5.96□□□□□ -1.45
PGK1-201ENST00000373316 EPPK1P58107 5090 aaKnown RBP5.94□□□□□ -1.46
PGK1-201ENST00000373316 APOBP04114 4563 aaKnown RBP5.94□□□□□ -1.46
PGK1-201ENST00000373316 A0A0A0MQY5 61 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms