RNA–Protein interactions for RNA: ENST00000373193.7

PTPRT-205, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-205ENST00000373193 KRTAP7-1Q8IUC3 87 aa5.04□□□□□ -1.6
PTPRT-205ENST00000373193 TENM3Q9P273 2699 aa5.04□□□□□ -1.6
PTPRT-205ENST00000373193 PP632Q6XCG6 107 aa5.03□□□□□ -1.6
PTPRT-205ENST00000373193 CELSR3Q9NYQ7 3312 aa5.03□□□□□ -1.6
PTPRT-205ENST00000373193 A0A1B0GVY2 172 aa5.03□□□□□ -1.6
PTPRT-205ENST00000373193 TGP01266 2768 aa5.02□□□□□ -1.61
PTPRT-205ENST00000373193 NF1P21359 2839 aa5.02□□□□□ -1.61
PTPRT-205ENST00000373193 FLNCQ14315 2725 aa5□□□□□ -1.61
PTPRT-205ENST00000373193 Q6ZRN7 208 aaPredicted RBP4.98□□□□□ -1.61
PTPRT-205ENST00000373193 RPS29P62273 56 aaKnown RBP4.98□□□□□ -1.61
PTPRT-205ENST00000373193 XIRP2A4UGR9 3374 aa4.97□□□□□ -1.61
PTPRT-205ENST00000373193 HTTP42858 3142 aa4.96□□□□□ -1.62
PTPRT-205ENST00000373193 REV3LO60673 3130 aa4.95□□□□□ -1.62
PTPRT-205ENST00000373193 NIPBLQ6KC79 2804 aaeCLIP4.94□□□□□ -1.62
PTPRT-205ENST00000373193 KRTAP13-1Q8IUC0 172 aa4.93□□□□□ -1.62
PTPRT-205ENST00000373193 LAMA1P25391 3075 aa4.91□□□□□ -1.62
PTPRT-205ENST00000373193 ZZEF1O43149 2961 aa4.91□□□□□ -1.62
PTPRT-205ENST00000373193 PDZD2O15018 2839 aa4.9□□□□□ -1.62
PTPRT-205ENST00000373193 DCHS2Q6V1P9 2916 aa4.89□□□□□ -1.63
PTPRT-205ENST00000373193 COL6A3P12111 3177 aa4.89□□□□□ -1.63
PTPRT-205ENST00000373193 ZANQ9Y493 2812 aa4.87□□□□□ -1.63
PTPRT-205ENST00000373193 BOD1L1Q8NFC6 3051 aa4.87□□□□□ -1.63
PTPRT-205ENST00000373193 LAMA3Q16787 3333 aa4.86□□□□□ -1.63
PTPRT-205ENST00000373193 ADGRG4Q8IZF6 3080 aa4.86□□□□□ -1.63
PTPRT-205ENST00000373193 BRCA2P51587 3418 aa4.85□□□□□ -1.63
PTPRT-205ENST00000373193 DMXL1Q9Y485 3027 aa4.85□□□□□ -1.63
PTPRT-205ENST00000373193 SRRM2Q9UQ35 2752 aaKnown RBP4.85□□□□□ -1.63
PTPRT-205ENST00000373193 FBN2P35556 2912 aa4.84□□□□□ -1.63
PTPRT-205ENST00000373193 UNC80Q8N2C7 3258 aa4.84□□□□□ -1.63
PTPRT-205ENST00000373193 CFAP47Q6ZTR5 3102 aa4.82□□□□□ -1.64
PTPRT-205ENST00000373193 DNAH14Q0VDD8 3507 aa4.82□□□□□ -1.64
PTPRT-205ENST00000373193 KRTAP10-10P60014 251 aa4.81□□□□□ -1.64
PTPRT-205ENST00000373193 VWFP04275 2813 aa4.81□□□□□ -1.64
PTPRT-205ENST00000373193 XP32Q5T750 250 aa4.8□□□□□ -1.64
PTPRT-205ENST00000373193 ATMQ13315 3056 aa4.8□□□□□ -1.64
PTPRT-205ENST00000373193 TNRC18O15417 2968 aaPredicted RBP4.8□□□□□ -1.64
PTPRT-205ENST00000373193 TENM4Q6N022 2769 aa4.77□□□□□ -1.65
PTPRT-205ENST00000373193 KRTAP12-2P59991 146 aa4.75□□□□□ -1.65
PTPRT-205ENST00000373193 PRO2289Q9P1D8 64 aa4.74□□□□□ -1.65
PTPRT-205ENST00000373193 CELSR1Q9NYQ6 3014 aa4.74□□□□□ -1.65
PTPRT-205ENST00000373193 PKD1L1Q8TDX9 2849 aa4.73□□□□□ -1.65
PTPRT-205ENST00000373193 HRNRQ86YZ3 2850 aaPredicted RBP4.71□□□□□ -1.66
PTPRT-205ENST00000373193 VCANP13611 3396 aa4.7□□□□□ -1.66
PTPRT-205ENST00000373193 TPRXLQ17RH7 258 aa4.69□□□□□ -1.66
PTPRT-205ENST00000373193 MXRA5Q9NR99 2828 aa4.67□□□□□ -1.66
PTPRT-205ENST00000373193 KRTAP1-4P0C5Y4 121 aa4.65□□□□□ -1.66
PTPRT-205ENST00000373193 SPEGQ15772 3267 aa4.65□□□□□ -1.66
PTPRT-205ENST00000373193 CDH23Q9H251 3354 aa4.64□□□□□ -1.67
PTPRT-205ENST00000373193 KRTAP13-4Q3LI77 160 aa4.6□□□□□ -1.67
PTPRT-205ENST00000373193 KRTAP15-1Q3LI76 137 aa4.6□□□□□ -1.67
PTPRT-205ENST00000373193 USP34Q70CQ2 3546 aa4.58□□□□□ -1.68
PTPRT-205ENST00000373193 TENM2Q9NT68 2774 aa4.55□□□□□ -1.68
PTPRT-205ENST00000373193 KRTAP12-1P59990 96 aa4.55□□□□□ -1.68
PTPRT-205ENST00000373193 KRTAP13-3Q3SY46 172 aa4.54□□□□□ -1.68
PTPRT-205ENST00000373193 EYSQ5T1H1 3165 aa4.52□□□□□ -1.69
PTPRT-205ENST00000373193 SZT2Q5T011 3432 aa4.51□□□□□ -1.69
PTPRT-205ENST00000373193 SPTBN5Q9NRC6 3674 aaKnown RBP4.49□□□□□ -1.69
PTPRT-205ENST00000373193 MYO15AQ9UKN7 3530 aa4.48□□□□□ -1.69
PTPRT-205ENST00000373193 ZFHX4Q86UP3 3567 aa4.46□□□□□ -1.69
PTPRT-205ENST00000373193 COL7A1Q02388 2944 aa4.46□□□□□ -1.69
PTPRT-205ENST00000373193 CRCT1Q9UGL9 99 aa4.46□□□□□ -1.7
PTPRT-205ENST00000373193 WDFY3Q8IZQ1 3526 aa4.45□□□□□ -1.7
PTPRT-205ENST00000373193 INE1O15225 51 aa4.42□□□□□ -1.7
PTPRT-205ENST00000373193 MEGF8Q7Z7M0 2845 aa4.41□□□□□ -1.7
PTPRT-205ENST00000373193 ZFHX3Q15911 3703 aa4.4□□□□□ -1.71
PTPRT-205ENST00000373193 LOC400499M0QZD8 3231 aa4.37□□□□□ -1.71
PTPRT-205ENST00000373193 FBN3Q75N90 2809 aa4.37□□□□□ -1.71
PTPRT-205ENST00000373193 SMG1Q96Q15 3661 aaKnown RBP4.34□□□□□ -1.71
PTPRT-205ENST00000373193 KRTAP3-1Q9BYR8 98 aa4.33□□□□□ -1.72
PTPRT-205ENST00000373193 FBN1P35555 2871 aaKnown RBP4.33□□□□□ -1.72
PTPRT-205ENST00000373193 NBPF19A0A087WUL8 3843 aa4.32□□□□□ -1.72
PTPRT-205ENST00000373193 LAMA5O15230 3695 aa4.3□□□□□ -1.72
PTPRT-205ENST00000373193 CSMD1Q96PZ7 3565 aa4.29□□□□□ -1.72
PTPRT-205ENST00000373193 KRTAP10-6P60371 365 aaPredicted RBP4.27□□□□□ -1.73
PTPRT-205ENST00000373193 ASPMQ8IZT6 3477 aa4.25□□□□□ -1.73
PTPRT-205ENST00000373193 DMDP11532 3685 aa4.24□□□□□ -1.73
PTPRT-205ENST00000373193 DCHS1Q96JQ0 3298 aa4.24□□□□□ -1.73
PTPRT-205ENST00000373193 OTOGQ6ZRI0 2925 aa4.21□□□□□ -1.74
PTPRT-205ENST00000373193 SPENQ96T58 3664 aaKnown RBP4.2□□□□□ -1.74
PTPRT-205ENST00000373193 KRTAP10-12P60413 245 aa4.2□□□□□ -1.74
PTPRT-205ENST00000373193 RELNP78509 3460 aa4.15□□□□□ -1.75
PTPRT-205ENST00000373193 KRTAP10-5P60370 271 aa4.12□□□□□ -1.75
PTPRT-205ENST00000373193 KRTAP12-3P60328 96 aa4.09□□□□□ -1.75
PTPRT-205ENST00000373193 KRTAP3-2Q9BYR7 98 aa4.07□□□□□ -1.76
PTPRT-205ENST00000373193 KRTAP21-3Q3LHN1 58 aa4.07□□□□□ -1.76
PTPRT-205ENST00000373193 TRRAPQ9Y4A5 3859 aa4.07□□□□□ -1.76
PTPRT-205ENST00000373193 VPS13CQ709C8 3753 aa4.07□□□□□ -1.76
PTPRT-205ENST00000373193 LCE3AQ5TA76 89 aa4.05□□□□□ -1.76
PTPRT-205ENST00000373193 CUBNO60494 3623 aa4.04□□□□□ -1.76
PTPRT-205ENST00000373193 KRTAP3-3Q9BYR6 98 aa4.02□□□□□ -1.77
PTPRT-205ENST00000373193 CSMD3Q7Z407 3707 aa4.01□□□□□ -1.77
PTPRT-205ENST00000373193 SVEP1Q4LDE5 3571 aa3.99□□□□□ -1.77
PTPRT-205ENST00000373193 ALMS1Q8TCU4 4167 aa3.95□□□□□ -1.78
PTPRT-205ENST00000373193 AKAP9Q99996 3911 aa3.91□□□□□ -1.78
PTPRT-205ENST00000373193 MUC3AQ02505 3323 aa3.87□□□□□ -1.79
PTPRT-205ENST00000373193 LORP23490 312 aaPredicted RBP3.85□□□□□ -1.79
PTPRT-205ENST00000373193 KRTAP23-1A1A580 65 aa3.83□□□□□ -1.8
PTPRT-205ENST00000373193 KRTAP8-1Q8IUC2 63 aa3.79□□□□□ -1.8
PTPRT-205ENST00000373193 MT1HL1P0DM35 61 aa3.78□□□□□ -1.8
PTPRT-205ENST00000373193 BSNQ9UPA5 3926 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms