RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 A0A1B0GVX0 72 aa9.52□□□□□ -0.89
PABPC4-202ENST00000372857 KRTAP13-1Q8IUC0 172 aa9.5□□□□□ -0.89
PABPC4-202ENST00000372857 APLNQ9ULZ1 77 aa9.5□□□□□ -0.89
PABPC4-202ENST00000372857 CDK2AP2O75956 126 aa9.5□□□□□ -0.89
PABPC4-202ENST00000372857 MRPL34Q9BQ48 92 aaKnown RBP9.5□□□□□ -0.89
PABPC4-202ENST00000372857 ANAPC11Q9NYG5 84 aa9.48□□□□□ -0.89
PABPC4-202ENST00000372857 LINC01554Q52M75 96 aa9.48□□□□□ -0.89
PABPC4-202ENST00000372857 STARD9Q9P2P6 4700 aa9.47□□□□□ -0.89
PABPC4-202ENST00000372857 PRKDCP78527 4128 aaKnown RBP9.47□□□□□ -0.89
PABPC4-202ENST00000372857 C14orf177Q52M58 125 aa9.47□□□□□ -0.89
PABPC4-202ENST00000372857 DNHD1Q96M86 4753 aa9.46□□□□□ -0.9
PABPC4-202ENST00000372857 MEGF8Q7Z7M0 2845 aa9.45□□□□□ -0.9
PABPC4-202ENST00000372857 J3QL48 77 aa9.43□□□□□ -0.9
PABPC4-202ENST00000372857 Q5W150 140 aa9.43□□□□□ -0.9
PABPC4-202ENST00000372857 SPINK6Q6UWN8 80 aa9.43□□□□□ -0.9
PABPC4-202ENST00000372857 KMT2AQ03164 3969 aa9.43□□□□□ -0.9
PABPC4-202ENST00000372857 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.42□□□□□ -0.9
PABPC4-202ENST00000372857 NBDYA0A0U1RRE5 68 aa9.39□□□□□ -0.91
PABPC4-202ENST00000372857 WWC2-AS2Q96NR7 200 aa9.39□□□□□ -0.91
PABPC4-202ENST00000372857 FRAS1Q86XX4 4008 aa9.38□□□□□ -0.91
PABPC4-202ENST00000372857 LINC00483Q53H64 154 aa9.37□□□□□ -0.91
PABPC4-202ENST00000372857 SPACA4Q8TDM5 124 aa9.33□□□□□ -0.92
PABPC4-202ENST00000372857 ACYP2P14621 99 aa9.33□□□□□ -0.92
PABPC4-202ENST00000372857 KRTAP13-3Q3SY46 172 aa9.31□□□□□ -0.92
PABPC4-202ENST00000372857 PSORS1C2Q9UIG4 136 aa9.31□□□□□ -0.92
PABPC4-202ENST00000372857 RETNLBQ9BQ08 111 aa9.31□□□□□ -0.92
PABPC4-202ENST00000372857 ZNF706Q9Y5V0 76 aaPredicted RBP9.31□□□□□ -0.92
PABPC4-202ENST00000372857 Q6ZRN7 208 aaPredicted RBP9.3□□□□□ -0.92
PABPC4-202ENST00000372857 DNAH2Q9P225 4427 aa9.28□□□□□ -0.92
PABPC4-202ENST00000372857 PLA2G1BP04054 148 aaKnown RBP9.28□□□□□ -0.92
PABPC4-202ENST00000372857 FBN3Q75N90 2809 aa9.28□□□□□ -0.92
PABPC4-202ENST00000372857 ALMS1Q8TCU4 4167 aa9.27□□□□□ -0.92
PABPC4-202ENST00000372857 CIRBP-AS1Q8TBR5 109 aa9.26□□□□□ -0.93
PABPC4-202ENST00000372857 NUPR2A6NF83 97 aa9.26□□□□□ -0.93
PABPC4-202ENST00000372857 DNAH8Q96JB1 4490 aa9.26□□□□□ -0.93
PABPC4-202ENST00000372857 VPS13DQ5THJ4 4388 aa9.25□□□□□ -0.93
PABPC4-202ENST00000372857 IGLV5-52A0A0A0MRZ9 124 aa9.25□□□□□ -0.93
PABPC4-202ENST00000372857 A0A1B0GU69 56 aa9.25□□□□□ -0.93
PABPC4-202ENST00000372857 A0A087WTM6 91 aa9.24□□□□□ -0.93
PABPC4-202ENST00000372857 DYNC2H1Q8NCM8 4307 aaKnown RBP9.24□□□□□ -0.93
PABPC4-202ENST00000372857 DMAC1Q96GE9 116 aa9.23□□□□□ -0.93
PABPC4-202ENST00000372857 HECTD4Q9Y4D8 3996 aa9.23□□□□□ -0.93
PABPC4-202ENST00000372857 ZNF861PO60384 105 aa9.23□□□□□ -0.93
PABPC4-202ENST00000372857 RTL8CO15255 209 aa9.21□□□□□ -0.93
PABPC4-202ENST00000372857 DNAH6Q9C0G6 4158 aa9.19□□□□□ -0.94
PABPC4-202ENST00000372857 LY6G6CO95867 125 aa9.19□□□□□ -0.94
PABPC4-202ENST00000372857 CSAG1Q6PB30 78 aa9.17□□□□□ -0.94
PABPC4-202ENST00000372857 DNAH17Q9UFH2 4485 aa9.16□□□□□ -0.94
PABPC4-202ENST00000372857 SPATA8Q6RVD6 105 aa9.15□□□□□ -0.94
PABPC4-202ENST00000372857 MIR22HGQ0VDD5 57 aa9.14□□□□□ -0.95
PABPC4-202ENST00000372857 FAM229AH3BQW9 127 aa9.11□□□□□ -0.95
PABPC4-202ENST00000372857 UQCR11O14957 56 aa9.1□□□□□ -0.95
PABPC4-202ENST00000372857 IGKV2-30P06310 120 aa9.1□□□□□ -0.95
PABPC4-202ENST00000372857 DNAH11Q96DT5 4516 aa9.1□□□□□ -0.95
PABPC4-202ENST00000372857 IGLV7-43P04211 117 aa9.07□□□□□ -0.96
PABPC4-202ENST00000372857 IGKV2D-30A0A075B6S6 120 aa9.07□□□□□ -0.96
PABPC4-202ENST00000372857 KRTAP21-3Q3LHN1 58 aa9.07□□□□□ -0.96
PABPC4-202ENST00000372857 C1orf134Q5TEV5 83 aa9.07□□□□□ -0.96
PABPC4-202ENST00000372857 KRTAP10-2P60368 255 aa9.05□□□□□ -0.96
PABPC4-202ENST00000372857 HYDINQ4G0P3 5121 aa9.01□□□□□ -0.97
PABPC4-202ENST00000372857 SSBP3-AS1Q7Z2R9 100 aa9.01□□□□□ -0.97
PABPC4-202ENST00000372857 SPINK1P00995 79 aa8.99□□□□□ -0.97
PABPC4-202ENST00000372857 DNAH5Q8TE73 4624 aa8.98□□□□□ -0.97
PABPC4-202ENST00000372857 LRP1BQ9NZR2 4599 aa8.98□□□□□ -0.97
PABPC4-202ENST00000372857 A0A0A0MQY5 61 aa8.97□□□□□ -0.97
PABPC4-202ENST00000372857 KRTAP16-1A8MUX0 517 aa8.97□□□□□ -0.97
PABPC4-202ENST00000372857 KRTAP13-2Q52LG2 175 aa8.93□□□□□ -0.98
PABPC4-202ENST00000372857 Q8N1X5 172 aa8.9□□□□□ -0.98
PABPC4-202ENST00000372857 KRTAP10-1P60331 282 aa8.88□□□□□ -0.99
PABPC4-202ENST00000372857 ROMO1P60602 79 aa8.86□□□□□ -0.99
PABPC4-202ENST00000372857 FAT2Q9NYQ8 4349 aa8.84□□□□□ -0.99
PABPC4-202ENST00000372857 FLG2Q5D862 2391 aaPredicted RBP8.84□□□□□ -0.99
PABPC4-202ENST00000372857 PKHD1P08F94 4074 aa8.82□□□□□ -1
PABPC4-202ENST00000372857 VPS13BQ7Z7G8 4022 aa8.81□□□□□ -1
PABPC4-202ENST00000372857 PKD1P98161 4303 aa8.77□□□□□ -1.01
PABPC4-202ENST00000372857 H0YAA0 97 aa8.77□□□□□ -1.01
PABPC4-202ENST00000372857 Q6ZSA8 131 aa8.76□□□□□ -1.01
PABPC4-202ENST00000372857 TYMSOSQ8TAI1 123 aa8.74□□□□□ -1.01
PABPC4-202ENST00000372857 KRTAP25-1Q3LHN0 102 aa8.74□□□□□ -1.01
PABPC4-202ENST00000372857 SMR3BP02814 79 aaPredicted RBP8.73□□□□□ -1.01
PABPC4-202ENST00000372857 KRTAP1-4P0C5Y4 121 aa8.72□□□□□ -1.01
PABPC4-202ENST00000372857 A8MUU9 505 aa8.71□□□□□ -1.02
PABPC4-202ENST00000372857 LINC00304Q8N9R0 145 aa8.69□□□□□ -1.02
PABPC4-202ENST00000372857 FAT1Q14517 4588 aa8.68□□□□□ -1.02
PABPC4-202ENST00000372857 P0C880 135 aa8.68□□□□□ -1.02
PABPC4-202ENST00000372857 CRIPTQ9P021 101 aa8.68□□□□□ -1.02
PABPC4-202ENST00000372857 A0A1B0GU33 70 aa8.64□□□□□ -1.03
PABPC4-202ENST00000372857 SACSQ9NZJ4 4579 aa8.6□□□□□ -1.03
PABPC4-202ENST00000372857 C9orf92A6NGG3 77 aa8.58□□□□□ -1.04
PABPC4-202ENST00000372857 H1FX-AS1Q4G0G2 97 aa8.58□□□□□ -1.04
PABPC4-202ENST00000372857 KRTAP3-1Q9BYR8 98 aa8.57□□□□□ -1.04
PABPC4-202ENST00000372857 DYNC1H1Q14204 4646 aaKnown RBP8.55□□□□□ -1.04
PABPC4-202ENST00000372857 KMT2CQ8NEZ4 4911 aaKnown RBP8.48□□□□□ -1.05
PABPC4-202ENST00000372857 K7ERS5 55 aa8.47□□□□□ -1.05
PABPC4-202ENST00000372857 NDUFAF8A1L188 74 aa8.46□□□□□ -1.06
PABPC4-202ENST00000372857 COX6B2Q6YFQ2 88 aa8.44□□□□□ -1.06
PABPC4-202ENST00000372857 SPINT4Q6UDR6 99 aa8.41□□□□□ -1.06
PABPC4-202ENST00000372857 C20orf166-AS1Q96NR2 134 aa8.41□□□□□ -1.06
PABPC4-202ENST00000372857 DMBT1Q9UGM3 2413 aaPredicted RBP8.4□□□□□ -1.06
PABPC4-202ENST00000372857 APOBP04114 4563 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms