RNA–Protein interactions for RNA: ENST00000372731.8

SPTAN1-202, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-202ENST00000372731 CFAP47Q6ZTR5 3102 aa5.07□□□□□ -1.6
SPTAN1-202ENST00000372731 LRBAP50851 2863 aa5.07□□□□□ -1.6
SPTAN1-202ENST00000372731 BOD1L1Q8NFC6 3051 aa5.07□□□□□ -1.6
SPTAN1-202ENST00000372731 KRTAP13-2Q52LG2 175 aa5.06□□□□□ -1.6
SPTAN1-202ENST00000372731 PP632Q6XCG6 107 aa5.06□□□□□ -1.6
SPTAN1-202ENST00000372731 IGSF10Q6WRI0 2623 aa5.06□□□□□ -1.6
SPTAN1-202ENST00000372731 NBEAL2Q6ZNJ1 2754 aa5.06□□□□□ -1.6
SPTAN1-202ENST00000372731 COL6A5A8TX70 2615 aa5.06□□□□□ -1.6
SPTAN1-202ENST00000372731 FRYLO94915 3013 aa5.06□□□□□ -1.6
SPTAN1-202ENST00000372731 REV3LO60673 3130 aa5.04□□□□□ -1.6
SPTAN1-202ENST00000372731 NBEAQ8NFP9 2946 aa5.03□□□□□ -1.6
SPTAN1-202ENST00000372731 NOTCH1P46531 2555 aa5.02□□□□□ -1.61
SPTAN1-202ENST00000372731 ADGRG4Q8IZF6 3080 aa5□□□□□ -1.61
SPTAN1-202ENST00000372731 WDFY3Q8IZQ1 3526 aa5□□□□□ -1.61
SPTAN1-202ENST00000372731 ASPMQ8IZT6 3477 aa5□□□□□ -1.61
SPTAN1-202ENST00000372731 TPRXLQ17RH7 258 aa4.98□□□□□ -1.61
SPTAN1-202ENST00000372731 ATMQ13315 3056 aa4.98□□□□□ -1.61
SPTAN1-202ENST00000372731 DMXL2Q8TDJ6 3036 aa4.97□□□□□ -1.61
SPTAN1-202ENST00000372731 XP32Q5T750 250 aa4.96□□□□□ -1.61
SPTAN1-202ENST00000372731 UBR5O95071 2799 aaPredicted RBP4.95□□□□□ -1.62
SPTAN1-202ENST00000372731 NDUFAF8A1L188 74 aa4.94□□□□□ -1.62
SPTAN1-202ENST00000372731 COL12A1Q99715 3063 aa4.94□□□□□ -1.62
SPTAN1-202ENST00000372731 KRTAP13-1Q8IUC0 172 aa4.93□□□□□ -1.62
SPTAN1-202ENST00000372731 UTP20O75691 2785 aaKnown RBP4.93□□□□□ -1.62
SPTAN1-202ENST00000372731 ITPR1Q14643 2758 aa4.92□□□□□ -1.62
SPTAN1-202ENST00000372731 TACC2O95359 2948 aa4.91□□□□□ -1.62
SPTAN1-202ENST00000372731 FLNCQ14315 2725 aa4.9□□□□□ -1.63
SPTAN1-202ENST00000372731 TNRC18O15417 2968 aaPredicted RBP4.9□□□□□ -1.63
SPTAN1-202ENST00000372731 NSD1Q96L73 2696 aaPredicted RBP4.89□□□□□ -1.63
SPTAN1-202ENST00000372731 DCHS1Q96JQ0 3298 aa4.88□□□□□ -1.63
SPTAN1-202ENST00000372731 APCP25054 2843 aa4.87□□□□□ -1.63
SPTAN1-202ENST00000372731 ASH1LQ9NR48 2969 aaKnown RBP4.87□□□□□ -1.63
SPTAN1-202ENST00000372731 DMXL1Q9Y485 3027 aa4.85□□□□□ -1.63
SPTAN1-202ENST00000372731 ZZEF1O43149 2961 aa4.85□□□□□ -1.63
SPTAN1-202ENST00000372731 ZFHX4Q86UP3 3567 aa4.85□□□□□ -1.63
SPTAN1-202ENST00000372731 CRYBG3Q68DQ2 2970 aa4.84□□□□□ -1.63
SPTAN1-202ENST00000372731 LOC400499M0QZD8 3231 aa4.84□□□□□ -1.63
SPTAN1-202ENST00000372731 A6NN06 94 aa4.82□□□□□ -1.64
SPTAN1-202ENST00000372731 HIVEP1P15822 2718 aa4.79□□□□□ -1.64
SPTAN1-202ENST00000372731 CELSR2Q9HCU4 2923 aa4.76□□□□□ -1.65
SPTAN1-202ENST00000372731 HRNRQ86YZ3 2850 aaPredicted RBP4.75□□□□□ -1.65
SPTAN1-202ENST00000372731 RELNP78509 3460 aa4.75□□□□□ -1.65
SPTAN1-202ENST00000372731 CSMD1Q96PZ7 3565 aa4.75□□□□□ -1.65
SPTAN1-202ENST00000372731 KRTAP1-4P0C5Y4 121 aa4.75□□□□□ -1.65
SPTAN1-202ENST00000372731 KRTAP13-3Q3SY46 172 aa4.74□□□□□ -1.65
SPTAN1-202ENST00000372731 ZANQ9Y493 2812 aa4.74□□□□□ -1.65
SPTAN1-202ENST00000372731 DMDP11532 3685 aa4.72□□□□□ -1.65
SPTAN1-202ENST00000372731 NBPF19A0A087WUL8 3843 aa4.71□□□□□ -1.66
SPTAN1-202ENST00000372731 LAMA5O15230 3695 aa4.7□□□□□ -1.66
SPTAN1-202ENST00000372731 DCHS2Q6V1P9 2916 aa4.69□□□□□ -1.66
SPTAN1-202ENST00000372731 FBN2P35556 2912 aa4.67□□□□□ -1.66
SPTAN1-202ENST00000372731 NIPBLQ6KC79 2804 aaeCLIP4.66□□□□□ -1.66
SPTAN1-202ENST00000372731 H0YAA0 97 aa4.63□□□□□ -1.67
SPTAN1-202ENST00000372731 SMG1Q96Q15 3661 aaKnown RBP4.62□□□□□ -1.67
SPTAN1-202ENST00000372731 NF1P21359 2839 aa4.61□□□□□ -1.67
SPTAN1-202ENST00000372731 CELSR1Q9NYQ6 3014 aa4.56□□□□□ -1.68
SPTAN1-202ENST00000372731 TENM4Q6N022 2769 aa4.56□□□□□ -1.68
SPTAN1-202ENST00000372731 KRTAP12-2P59991 146 aa4.56□□□□□ -1.68
SPTAN1-202ENST00000372731 TENM1Q9UKZ4 2725 aa4.54□□□□□ -1.68
SPTAN1-202ENST00000372731 SVEP1Q4LDE5 3571 aa4.54□□□□□ -1.68
SPTAN1-202ENST00000372731 KRTAP15-1Q3LI76 137 aa4.53□□□□□ -1.68
SPTAN1-202ENST00000372731 ANK3Q12955 4377 aaKnown RBP4.52□□□□□ -1.69
SPTAN1-202ENST00000372731 MXRA5Q9NR99 2828 aa4.51□□□□□ -1.69
SPTAN1-202ENST00000372731 KRTAP13-4Q3LI77 160 aa4.51□□□□□ -1.69
SPTAN1-202ENST00000372731 SPENQ96T58 3664 aaKnown RBP4.47□□□□□ -1.69
SPTAN1-202ENST00000372731 CUBNO60494 3623 aa4.44□□□□□ -1.7
SPTAN1-202ENST00000372731 TENM3Q9P273 2699 aa4.43□□□□□ -1.7
SPTAN1-202ENST00000372731 MUC3AQ02505 3323 aa4.43□□□□□ -1.7
SPTAN1-202ENST00000372731 CSMD2Q7Z408 3487 aa4.41□□□□□ -1.7
SPTAN1-202ENST00000372731 BSNQ9UPA5 3926 aa4.4□□□□□ -1.71
SPTAN1-202ENST00000372731 CRCT1Q9UGL9 99 aa4.39□□□□□ -1.71
SPTAN1-202ENST00000372731 TENM2Q9NT68 2774 aa4.38□□□□□ -1.71
SPTAN1-202ENST00000372731 ZFHX3Q15911 3703 aa4.38□□□□□ -1.71
SPTAN1-202ENST00000372731 TGP01266 2768 aa4.35□□□□□ -1.71
SPTAN1-202ENST00000372731 PDZD2O15018 2839 aa4.33□□□□□ -1.72
SPTAN1-202ENST00000372731 HUWE1Q7Z6Z7 4374 aaKnown RBP4.31□□□□□ -1.72
SPTAN1-202ENST00000372731 PKD1L1Q8TDX9 2849 aa4.31□□□□□ -1.72
SPTAN1-202ENST00000372731 KRTAP12-1P59990 96 aa4.31□□□□□ -1.72
SPTAN1-202ENST00000372731 VWFP04275 2813 aa4.28□□□□□ -1.73
SPTAN1-202ENST00000372731 KRTAP10-12P60413 245 aa4.27□□□□□ -1.73
SPTAN1-202ENST00000372731 KRTAP3-1Q9BYR8 98 aa4.26□□□□□ -1.73
SPTAN1-202ENST00000372731 FBN1P35555 2871 aaKnown RBP4.24□□□□□ -1.73
SPTAN1-202ENST00000372731 VPS13CQ709C8 3753 aa4.23□□□□□ -1.73
SPTAN1-202ENST00000372731 TRRAPQ9Y4A5 3859 aa4.22□□□□□ -1.73
SPTAN1-202ENST00000372731 KRTAP4-5Q9BYR2 181 aa4.21□□□□□ -1.74
SPTAN1-202ENST00000372731 OTOGQ6ZRI0 2925 aa4.19□□□□□ -1.74
SPTAN1-202ENST00000372731 AKAP9Q99996 3911 aa4.18□□□□□ -1.74
SPTAN1-202ENST00000372731 INE1O15225 51 aa4.18□□□□□ -1.74
SPTAN1-202ENST00000372731 KRTAP10-6P60371 365 aaPredicted RBP4.13□□□□□ -1.75
SPTAN1-202ENST00000372731 ALMS1Q8TCU4 4167 aa4.11□□□□□ -1.75
SPTAN1-202ENST00000372731 SRRM2Q9UQ35 2752 aaKnown RBP4.1□□□□□ -1.75
SPTAN1-202ENST00000372731 KRTAP8-1Q8IUC2 63 aa4.1□□□□□ -1.75
SPTAN1-202ENST00000372731 MT1HL1P0DM35 61 aa4.09□□□□□ -1.75
SPTAN1-202ENST00000372731 FBN3Q75N90 2809 aa4.09□□□□□ -1.76
SPTAN1-202ENST00000372731 CSMD3Q7Z407 3707 aa4.07□□□□□ -1.76
SPTAN1-202ENST00000372731 KRTAP12-3P60328 96 aa4.06□□□□□ -1.76
SPTAN1-202ENST00000372731 LORP23490 312 aaPredicted RBP4.05□□□□□ -1.76
SPTAN1-202ENST00000372731 MEGF8Q7Z7M0 2845 aa4.04□□□□□ -1.76
SPTAN1-202ENST00000372731 COL7A1Q02388 2944 aa4.01□□□□□ -1.77
SPTAN1-202ENST00000372731 ZNF469Q96JG9 3925 aaPredicted RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms