RNA–Protein interactions for RNA: ENST00000371608.6

BCAS4-202, Transcript of breast carcinoma amplified sequence 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene BCAS4, Length 6,680 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4-202ENST00000371608 LINC01558Q9Y6Z2 57 aa7.27□□□□□ -1.25
BCAS4-202ENST00000371608 DMXL1Q9Y485 3027 aa7.25□□□□□ -1.25
BCAS4-202ENST00000371608 RPL37P61927 97 aaKnown RBP7.25□□□□□ -1.25
BCAS4-202ENST00000371608 Q75L30 129 aa7.25□□□□□ -1.25
BCAS4-202ENST00000371608 ASH1LQ9NR48 2969 aaKnown RBP7.24□□□□□ -1.25
BCAS4-202ENST00000371608 APCP25054 2843 aa7.22□□□□□ -1.25
BCAS4-202ENST00000371608 RPS29P62273 56 aaKnown RBP7.22□□□□□ -1.25
BCAS4-202ENST00000371608 ZZEF1O43149 2961 aa7.21□□□□□ -1.25
BCAS4-202ENST00000371608 A8MUU9 505 aa7.2□□□□□ -1.26
BCAS4-202ENST00000371608 CYSTM1Q9H1C7 97 aa7.2□□□□□ -1.26
BCAS4-202ENST00000371608 PRAC1Q96KF2 57 aa7.16□□□□□ -1.26
BCAS4-202ENST00000371608 A0A1B0GVY2 172 aa7.16□□□□□ -1.26
BCAS4-202ENST00000371608 CELSR2Q9HCU4 2923 aa7.16□□□□□ -1.26
BCAS4-202ENST00000371608 KRTAP29-1A8MX34 341 aaPredicted RBP7.13□□□□□ -1.27
BCAS4-202ENST00000371608 ASB16-AS1Q495Z4 193 aa7.13□□□□□ -1.27
BCAS4-202ENST00000371608 KRTAP13-1Q8IUC0 172 aa7.13□□□□□ -1.27
BCAS4-202ENST00000371608 ROMO1P60602 79 aa7.12□□□□□ -1.27
BCAS4-202ENST00000371608 Q5VV11 94 aa7.11□□□□□ -1.27
BCAS4-202ENST00000371608 DCHS2Q6V1P9 2916 aa7.08□□□□□ -1.28
BCAS4-202ENST00000371608 A8MU10 97 aa7.03□□□□□ -1.28
BCAS4-202ENST00000371608 MYO15AQ9UKN7 3530 aa7.01□□□□□ -1.29
BCAS4-202ENST00000371608 Q5XG85 94 aa7.01□□□□□ -1.29
BCAS4-202ENST00000371608 LOC400499M0QZD8 3231 aa7.01□□□□□ -1.29
BCAS4-202ENST00000371608 XP32Q5T750 250 aa6.99□□□□□ -1.29
BCAS4-202ENST00000371608 NIPBLQ6KC79 2804 aaeCLIP6.98□□□□□ -1.29
BCAS4-202ENST00000371608 ZANQ9Y493 2812 aa6.98□□□□□ -1.29
BCAS4-202ENST00000371608 TENM2Q9NT68 2774 aa6.98□□□□□ -1.29
BCAS4-202ENST00000371608 KRTAP1-4P0C5Y4 121 aa6.95□□□□□ -1.3
BCAS4-202ENST00000371608 NF1P21359 2839 aa6.95□□□□□ -1.3
BCAS4-202ENST00000371608 TENM1Q9UKZ4 2725 aa6.94□□□□□ -1.3
BCAS4-202ENST00000371608 KRTAP10-10P60014 251 aa6.92□□□□□ -1.3
BCAS4-202ENST00000371608 KRTAP10-8P60410 259 aa6.92□□□□□ -1.3
BCAS4-202ENST00000371608 NBPF19A0A087WUL8 3843 aa6.88□□□□□ -1.31
BCAS4-202ENST00000371608 RELNP78509 3460 aa6.88□□□□□ -1.31
BCAS4-202ENST00000371608 ASPMQ8IZT6 3477 aa6.87□□□□□ -1.31
BCAS4-202ENST00000371608 HRNRQ86YZ3 2850 aaPredicted RBP6.86□□□□□ -1.31
BCAS4-202ENST00000371608 TPRXLQ17RH7 258 aa6.86□□□□□ -1.31
BCAS4-202ENST00000371608 FBN2P35556 2912 aa6.85□□□□□ -1.31
BCAS4-202ENST00000371608 TNP1P09430 55 aa6.84□□□□□ -1.31
BCAS4-202ENST00000371608 WDFY3Q8IZQ1 3526 aa6.83□□□□□ -1.32
BCAS4-202ENST00000371608 A0A0A0MQY5 61 aa6.83□□□□□ -1.32
BCAS4-202ENST00000371608 DCHS1Q96JQ0 3298 aa6.82□□□□□ -1.32
BCAS4-202ENST00000371608 TENM3Q9P273 2699 aa6.81□□□□□ -1.32
BCAS4-202ENST00000371608 CELSR1Q9NYQ6 3014 aa6.8□□□□□ -1.32
BCAS4-202ENST00000371608 PKD1L1Q8TDX9 2849 aa6.8□□□□□ -1.32
BCAS4-202ENST00000371608 KRTAP13-3Q3SY46 172 aa6.73□□□□□ -1.33
BCAS4-202ENST00000371608 LAMA5O15230 3695 aa6.72□□□□□ -1.33
BCAS4-202ENST00000371608 MXRA5Q9NR99 2828 aa6.69□□□□□ -1.34
BCAS4-202ENST00000371608 VWFP04275 2813 aa6.68□□□□□ -1.34
BCAS4-202ENST00000371608 C10orf95Q9H7T3 257 aa6.66□□□□□ -1.34
BCAS4-202ENST00000371608 ZFHX3Q15911 3703 aa6.66□□□□□ -1.34
BCAS4-202ENST00000371608 PRO2289Q9P1D8 64 aa6.63□□□□□ -1.35
BCAS4-202ENST00000371608 ZFHX4Q86UP3 3567 aa6.61□□□□□ -1.35
BCAS4-202ENST00000371608 KRTAP25-1Q3LHN0 102 aa6.59□□□□□ -1.35
BCAS4-202ENST00000371608 DMDP11532 3685 aa6.55□□□□□ -1.36
BCAS4-202ENST00000371608 KRTAP16-1A8MUX0 517 aa6.55□□□□□ -1.36
BCAS4-202ENST00000371608 PDZD2O15018 2839 aa6.53□□□□□ -1.36
BCAS4-202ENST00000371608 H3BS24 57 aa6.5□□□□□ -1.37
BCAS4-202ENST00000371608 P0C880 135 aa6.49□□□□□ -1.37
BCAS4-202ENST00000371608 A6NN06 94 aa6.44□□□□□ -1.38
BCAS4-202ENST00000371608 TGP01266 2768 aa6.43□□□□□ -1.38
BCAS4-202ENST00000371608 MUC3AQ02505 3323 aa6.43□□□□□ -1.38
BCAS4-202ENST00000371608 OTOGQ6ZRI0 2925 aa6.42□□□□□ -1.38
BCAS4-202ENST00000371608 FBN1P35555 2871 aaKnown RBP6.42□□□□□ -1.38
BCAS4-202ENST00000371608 CSMD1Q96PZ7 3565 aa6.41□□□□□ -1.38
BCAS4-202ENST00000371608 CSMD2Q7Z408 3487 aa6.4□□□□□ -1.38
BCAS4-202ENST00000371608 H0YAA0 97 aa6.38□□□□□ -1.39
BCAS4-202ENST00000371608 NDUFAF8A1L188 74 aa6.37□□□□□ -1.39
BCAS4-202ENST00000371608 SMG1Q96Q15 3661 aaKnown RBP6.37□□□□□ -1.39
BCAS4-202ENST00000371608 PP632Q6XCG6 107 aa6.36□□□□□ -1.39
BCAS4-202ENST00000371608 ANK3Q12955 4377 aaKnown RBP6.35□□□□□ -1.39
BCAS4-202ENST00000371608 SRRM2Q9UQ35 2752 aaKnown RBP6.31□□□□□ -1.4
BCAS4-202ENST00000371608 KRTAP4-5Q9BYR2 181 aa6.27□□□□□ -1.4
BCAS4-202ENST00000371608 SVEP1Q4LDE5 3571 aa6.23□□□□□ -1.41
BCAS4-202ENST00000371608 SPENQ96T58 3664 aaKnown RBP6.17□□□□□ -1.42
BCAS4-202ENST00000371608 TRRAPQ9Y4A5 3859 aa6.17□□□□□ -1.42
BCAS4-202ENST00000371608 CUBNO60494 3623 aa6.17□□□□□ -1.42
BCAS4-202ENST00000371608 KRTAP12-2P59991 146 aa6.15□□□□□ -1.42
BCAS4-202ENST00000371608 MT1HL1P0DM35 61 aa6.14□□□□□ -1.43
BCAS4-202ENST00000371608 FBN3Q75N90 2809 aa6.08□□□□□ -1.44
BCAS4-202ENST00000371608 COL7A1Q02388 2944 aa6.04□□□□□ -1.44
BCAS4-202ENST00000371608 KRTAP3-1Q9BYR8 98 aa6.02□□□□□ -1.45
BCAS4-202ENST00000371608 HUWE1Q7Z6Z7 4374 aaKnown RBP6□□□□□ -1.45
BCAS4-202ENST00000371608 BSNQ9UPA5 3926 aa5.99□□□□□ -1.45
BCAS4-202ENST00000371608 KRTAP13-4Q3LI77 160 aa5.98□□□□□ -1.45
BCAS4-202ENST00000371608 MEGF8Q7Z7M0 2845 aa5.98□□□□□ -1.45
BCAS4-202ENST00000371608 KRTAP12-1P59990 96 aa5.97□□□□□ -1.45
BCAS4-202ENST00000371608 CRCT1Q9UGL9 99 aa5.97□□□□□ -1.45
BCAS4-202ENST00000371608 KRTAP15-1Q3LI76 137 aa5.95□□□□□ -1.46
BCAS4-202ENST00000371608 ALMS1Q8TCU4 4167 aa5.86□□□□□ -1.47
BCAS4-202ENST00000371608 KRTAP10-4P60372 401 aaPredicted RBP5.85□□□□□ -1.47
BCAS4-202ENST00000371608 VPS13CQ709C8 3753 aa5.84□□□□□ -1.48
BCAS4-202ENST00000371608 KRTAP10-6P60371 365 aaPredicted RBP5.76□□□□□ -1.49
BCAS4-202ENST00000371608 KRTAP10-12P60413 245 aa5.75□□□□□ -1.49
BCAS4-202ENST00000371608 CSMD3Q7Z407 3707 aa5.7□□□□□ -1.5
BCAS4-202ENST00000371608 LORP23490 312 aaPredicted RBP5.69□□□□□ -1.5
BCAS4-202ENST00000371608 DNAH9Q9NYC9 4486 aa5.67□□□□□ -1.5
BCAS4-202ENST00000371608 AKAP9Q99996 3911 aa5.66□□□□□ -1.5
BCAS4-202ENST00000371608 ZNF469Q96JG9 3925 aaPredicted RBP5.63□□□□□ -1.51
BCAS4-202ENST00000371608 KRTAP3-3Q9BYR6 98 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms