RNA–Protein interactions for RNA: ENST00000371608.6

BCAS4-202, Transcript of breast carcinoma amplified sequence 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene BCAS4, Length 6,680 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4-202ENST00000371608 DCAF8L2P0C7V8 631 aa23.51■■□□□ 1.35
BCAS4-202ENST00000371608 SUPT5HO00267 1087 aaKnown RBP21.6■■□□□ 1.05
BCAS4-202ENST00000371608 NISCHQ9Y2I1 1504 aa21.48■■□□□ 1.03
BCAS4-202ENST00000371608 SHROOM4Q9ULL8 1493 aa21.42■■□□□ 1.02
BCAS4-202ENST00000371608 EHMT2Q96KQ7 1210 aa21.33■■□□□ 1.01
BCAS4-202ENST00000371608 FAM9AQ8IZU1 332 aaPredicted RBP20.52■□□□□ 0.88
BCAS4-202ENST00000371608 APLP2Q06481 763 aa20.51■□□□□ 0.87
BCAS4-202ENST00000371608 RANGAP1P46060 587 aaPredicted RBP20.51■□□□□ 0.87
BCAS4-202ENST00000371608 TTBK1Q5TCY1 1321 aaPredicted RBP20.46■□□□□ 0.87
BCAS4-202ENST00000371608 ATP1B4Q9UN42 357 aaPredicted RBP20.32■□□□□ 0.84
BCAS4-202ENST00000371608 TRIM41Q8WV44 630 aa19.89■□□□□ 0.77
BCAS4-202ENST00000371608 UBTFP17480 764 aaKnown RBP19.84■□□□□ 0.77
BCAS4-202ENST00000371608 MYT1LQ9UL68 1186 aa19.79■□□□□ 0.76
BCAS4-202ENST00000371608 PCGF6Q9BYE7 350 aa19.71■□□□□ 0.75
BCAS4-202ENST00000371608 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.67■□□□□ 0.74
BCAS4-202ENST00000371608 HNRNPUL2Q1KMD3 747 aaKnown RBP19.67■□□□□ 0.74
BCAS4-202ENST00000371608 CHIC1Q5VXU3 224 aa19.55■□□□□ 0.72
BCAS4-202ENST00000371608 PABPN1Q86U42 306 aaKnown RBP eCLIP19.5■□□□□ 0.71
BCAS4-202ENST00000371608 PPARGC1BQ86YN6 1023 aaKnown RBP19.48■□□□□ 0.71
BCAS4-202ENST00000371608 PELP1Q8IZL8 1130 aaKnown RBP19.46■□□□□ 0.71
BCAS4-202ENST00000371608 ABCC9O60706 1549 aa19.46■□□□□ 0.71
BCAS4-202ENST00000371608 CCER1Q8TC90 406 aaPredicted RBP19.4■□□□□ 0.7
BCAS4-202ENST00000371608 ITGAEP38570 1179 aa19.34■□□□□ 0.69
BCAS4-202ENST00000371608 POLR3GLQ9BT43 218 aa19.21■□□□□ 0.67
BCAS4-202ENST00000371608 FBLN2P98095 1184 aa19.15■□□□□ 0.66
BCAS4-202ENST00000371608 CNGB1Q14028 1251 aaPredicted RBP19.09■□□□□ 0.65
BCAS4-202ENST00000371608 SLC4A1APQ9BWU0 796 aaKnown RBP19.06■□□□□ 0.64
BCAS4-202ENST00000371608 YTHDC1Q96MU7 727 aaKnown RBP18.94■□□□□ 0.62
BCAS4-202ENST00000371608 ERICH6Q7L0X2 663 aa18.86■□□□□ 0.61
BCAS4-202ENST00000371608 LOC105371045A0A1W2PR82 267 aa18.84■□□□□ 0.61
BCAS4-202ENST00000371608 ZEB1P37275 1124 aaPredicted RBP18.83■□□□□ 0.61
BCAS4-202ENST00000371608 CENPBP07199 599 aaPredicted RBP18.78■□□□□ 0.6
BCAS4-202ENST00000371608 ARID3CA6NKF2 412 aa18.78■□□□□ 0.6
BCAS4-202ENST00000371608 FAM50AQ14320 339 aaKnown RBP18.77■□□□□ 0.6
BCAS4-202ENST00000371608 NEFLP07196 543 aa18.75■□□□□ 0.59
BCAS4-202ENST00000371608 PLPPR3Q6T4P5 718 aa18.74■□□□□ 0.59
BCAS4-202ENST00000371608 TRIM52Q96A61 297 aa18.7■□□□□ 0.58
BCAS4-202ENST00000371608 BCANQ96GW7 911 aa18.69■□□□□ 0.58
BCAS4-202ENST00000371608 P3H3Q8IVL6 736 aa18.6■□□□□ 0.57
BCAS4-202ENST00000371608 ZNF326Q5BKZ1 582 aaKnown RBP18.55■□□□□ 0.56
BCAS4-202ENST00000371608 TRIM26Q12899 539 aaPredicted RBP18.54■□□□□ 0.56
BCAS4-202ENST00000371608 SLC24A1O60721 1099 aa18.47■□□□□ 0.55
BCAS4-202ENST00000371608 NEUROD1Q13562 356 aa18.47■□□□□ 0.55
BCAS4-202ENST00000371608 ZNF777Q9ULD5 760 aaPredicted RBP18.47■□□□□ 0.55
BCAS4-202ENST00000371608 ESF1Q9H501 851 aaKnown RBP18.44■□□□□ 0.54
BCAS4-202ENST00000371608 NPM1P06748 294 aaKnown RBP eCLIP18.37■□□□□ 0.53
BCAS4-202ENST00000371608 DAXXQ9UER7 740 aaPredicted RBP18.31■□□□□ 0.52
BCAS4-202ENST00000371608 SCRIBQ14160 1630 aa18.3■□□□□ 0.52
BCAS4-202ENST00000371608 STAG3Q9UJ98 1225 aa18.27■□□□□ 0.52
BCAS4-202ENST00000371608 CHGAP10645 457 aaKnown RBP18.26■□□□□ 0.51
BCAS4-202ENST00000371608 BCL11AQ9H165 835 aa18.25■□□□□ 0.51
BCAS4-202ENST00000371608 CLSPNQ9HAW4 1339 aa18.2■□□□□ 0.5
BCAS4-202ENST00000371608 HRCP23327 699 aa18.14■□□□□ 0.49
BCAS4-202ENST00000371608 CDK11AQ9UQ88 783 aaPredicted RBP18.13■□□□□ 0.49
BCAS4-202ENST00000371608 SENP3Q9H4L4 574 aaPredicted RBP18.1■□□□□ 0.49
BCAS4-202ENST00000371608 CHMP7Q8WUX9 453 aaPredicted RBP18.09■□□□□ 0.49
BCAS4-202ENST00000371608 SCAF1Q9H7N4 1312 aaKnown RBP18.06■□□□□ 0.48
BCAS4-202ENST00000371608 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.05■□□□□ 0.48
BCAS4-202ENST00000371608 CSRNP3Q8WYN3 585 aa18.04■□□□□ 0.48
BCAS4-202ENST00000371608 PLEKHG5O94827 1062 aa18.04■□□□□ 0.48
BCAS4-202ENST00000371608 NEFMP07197 916 aa18.02■□□□□ 0.47
BCAS4-202ENST00000371608 ZBTB47Q9UFB7 747 aaPredicted RBP17.98■□□□□ 0.47
BCAS4-202ENST00000371608 A0A0G2JS52 829 aa17.97■□□□□ 0.47
BCAS4-202ENST00000371608 KCNH8Q96L42 1107 aa17.96■□□□□ 0.47
BCAS4-202ENST00000371608 CANXP27824 592 aaKnown RBP17.92■□□□□ 0.46
BCAS4-202ENST00000371608 CHIC2Q9UKJ5 165 aa17.92■□□□□ 0.46
BCAS4-202ENST00000371608 ARID4BQ4LE39 1312 aaPredicted RBP17.9■□□□□ 0.46
BCAS4-202ENST00000371608 ZNF316A6NFI3 1004 aaPredicted RBP17.88■□□□□ 0.45
BCAS4-202ENST00000371608 TRHP20396 242 aaPredicted RBP17.88■□□□□ 0.45
BCAS4-202ENST00000371608 DIEXFQ68CQ4 756 aaKnown RBP17.86■□□□□ 0.45
BCAS4-202ENST00000371608 ANP32CO43423 234 aa17.86■□□□□ 0.45
BCAS4-202ENST00000371608 ZBTB7CA1YPR0 619 aa17.86■□□□□ 0.45
BCAS4-202ENST00000371608 MYT1Q01538 1121 aa17.84■□□□□ 0.45
BCAS4-202ENST00000371608 C14orf37Q86TY3 774 aa17.82■□□□□ 0.44
BCAS4-202ENST00000371608 ERCC6Q03468 1493 aa17.81■□□□□ 0.44
BCAS4-202ENST00000371608 RB1CC1Q8TDY2 1594 aa17.75■□□□□ 0.43
BCAS4-202ENST00000371608 TSPY4P0CV99 314 aa17.75■□□□□ 0.43
BCAS4-202ENST00000371608 TSPY10P0CW01 314 aa17.75■□□□□ 0.43
BCAS4-202ENST00000371608 PPP1R15AO75807 674 aaPredicted RBP17.74■□□□□ 0.43
BCAS4-202ENST00000371608 KDM2AQ9Y2K7 1162 aa17.74■□□□□ 0.43
BCAS4-202ENST00000371608 HAP1P54257 671 aaPredicted RBP17.67■□□□□ 0.42
BCAS4-202ENST00000371608 MTUS2Q5JR59 1369 aa17.63■□□□□ 0.41
BCAS4-202ENST00000371608 SALL2Q9Y467 1007 aaPredicted RBP17.62■□□□□ 0.41
BCAS4-202ENST00000371608 ZCCHC6Q5VYS8 1495 aaKnown RBP17.61■□□□□ 0.41
BCAS4-202ENST00000371608 TONSLQ96HA7 1378 aa17.61■□□□□ 0.41
BCAS4-202ENST00000371608 PLEKHD1A6NEE1 506 aa17.61■□□□□ 0.41
BCAS4-202ENST00000371608 RRP7BPQ9NSQ0 103 aa17.55■□□□□ 0.4
BCAS4-202ENST00000371608 MLECQ14165 292 aa17.54■□□□□ 0.4
BCAS4-202ENST00000371608 CCDC180Q9P1Z9 1646 aa17.52■□□□□ 0.4
BCAS4-202ENST00000371608 BAZ1BQ9UIG0 1483 aaKnown RBP17.52■□□□□ 0.4
BCAS4-202ENST00000371608 LMOD2Q6P5Q4 547 aa17.52■□□□□ 0.4
BCAS4-202ENST00000371608 NPM2Q86SE8 214 aaKnown RBP17.52■□□□□ 0.39
BCAS4-202ENST00000371608 RTL5Q5HYW3 569 aaPredicted RBP17.51■□□□□ 0.39
BCAS4-202ENST00000371608 RGL3Q3MIN7 710 aa17.5■□□□□ 0.39
BCAS4-202ENST00000371608 ARXQ96QS3 562 aa17.47■□□□□ 0.39
BCAS4-202ENST00000371608 TMC1Q8TDI8 760 aa17.46■□□□□ 0.39
BCAS4-202ENST00000371608 FAM9BQ8IZU0 186 aa17.45■□□□□ 0.38
BCAS4-202ENST00000371608 CFDP1Q9UEE9 299 aaPredicted RBP17.4■□□□□ 0.38
BCAS4-202ENST00000371608 DDX10Q13206 875 aaKnown RBP17.38■□□□□ 0.37
BCAS4-202ENST00000371608 HIRIP3Q9BW71 556 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms