RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 COL7A1Q02388 2944 aa5.55□□□□□ -1.52
SMARCA1-202ENST00000371122 KRTAP10-2P60368 255 aa5.54□□□□□ -1.52
SMARCA1-202ENST00000371122 C8orf87E5RJ46 101 aa5.54□□□□□ -1.52
SMARCA1-202ENST00000371122 FP248Q71RG6 208 aaPredicted RBP5.53□□□□□ -1.52
SMARCA1-202ENST00000371122 DNAH10Q8IVF4 4471 aa5.53□□□□□ -1.52
SMARCA1-202ENST00000371122 A0A0D9SG42 100 aa5.52□□□□□ -1.53
SMARCA1-202ENST00000371122 MMP24-AS1A0A0U1RRL7 71 aa5.52□□□□□ -1.53
SMARCA1-202ENST00000371122 DNAH9Q9NYC9 4486 aa5.51□□□□□ -1.53
SMARCA1-202ENST00000371122 DNAH1Q9P2D7 4330 aa5.51□□□□□ -1.53
SMARCA1-202ENST00000371122 LINC01554Q52M75 96 aa5.5□□□□□ -1.53
SMARCA1-202ENST00000371122 DYNC2H1Q8NCM8 4307 aaKnown RBP5.49□□□□□ -1.53
SMARCA1-202ENST00000371122 HRES1P13985 223 aa5.49□□□□□ -1.53
SMARCA1-202ENST00000371122 KRTAP7-1Q8IUC3 87 aa5.49□□□□□ -1.53
SMARCA1-202ENST00000371122 LINC00472Q9H8W2 130 aa5.49□□□□□ -1.53
SMARCA1-202ENST00000371122 UQCR11O14957 56 aa5.48□□□□□ -1.53
SMARCA1-202ENST00000371122 A0A087X002 238 aa5.48□□□□□ -1.53
SMARCA1-202ENST00000371122 NOTCH2NLQ7Z3S9 236 aa5.48□□□□□ -1.53
SMARCA1-202ENST00000371122 PRKDCP78527 4128 aaKnown RBP5.48□□□□□ -1.53
SMARCA1-202ENST00000371122 KRTAP10-1P60331 282 aa5.48□□□□□ -1.53
SMARCA1-202ENST00000371122 CD164Q04900 197 aa5.48□□□□□ -1.53
SMARCA1-202ENST00000371122 MIR22HGQ0VDD5 57 aa5.48□□□□□ -1.53
SMARCA1-202ENST00000371122 HUWE1Q7Z6Z7 4374 aaKnown RBP5.47□□□□□ -1.53
SMARCA1-202ENST00000371122 DNAH7Q8WXX0 4024 aa5.47□□□□□ -1.53
SMARCA1-202ENST00000371122 J3QL48 77 aa5.47□□□□□ -1.53
SMARCA1-202ENST00000371122 KRTAP4-16G5E9R7 235 aaPredicted RBP5.46□□□□□ -1.53
SMARCA1-202ENST00000371122 FRAS1Q86XX4 4008 aa5.45□□□□□ -1.54
SMARCA1-202ENST00000371122 PLAC8Q9NZF1 115 aa5.45□□□□□ -1.54
SMARCA1-202ENST00000371122 CYP4F30PQ9H0H9 118 aa5.43□□□□□ -1.54
SMARCA1-202ENST00000371122 FBN3Q75N90 2809 aa5.41□□□□□ -1.54
SMARCA1-202ENST00000371122 A8MU10 97 aa5.41□□□□□ -1.54
SMARCA1-202ENST00000371122 COX6B2Q6YFQ2 88 aa5.41□□□□□ -1.54
SMARCA1-202ENST00000371122 IGLV7-46A0A075B6I9 117 aa5.41□□□□□ -1.54
SMARCA1-202ENST00000371122 SPANXA2-OT1Q8N9U9 137 aa5.41□□□□□ -1.54
SMARCA1-202ENST00000371122 MEGF8Q7Z7M0 2845 aa5.41□□□□□ -1.54
SMARCA1-202ENST00000371122 CRIPTQ9P021 101 aa5.41□□□□□ -1.54
SMARCA1-202ENST00000371122 SPINT4Q6UDR6 99 aa5.4□□□□□ -1.54
SMARCA1-202ENST00000371122 PRAC1Q96KF2 57 aa5.39□□□□□ -1.55
SMARCA1-202ENST00000371122 SPINK7P58062 85 aa5.38□□□□□ -1.55
SMARCA1-202ENST00000371122 Q5W150 140 aa5.38□□□□□ -1.55
SMARCA1-202ENST00000371122 SPRR1BP22528 89 aa5.38□□□□□ -1.55
SMARCA1-202ENST00000371122 Q1T7F1 81 aa5.36□□□□□ -1.55
SMARCA1-202ENST00000371122 Q5VV11 94 aa5.35□□□□□ -1.55
SMARCA1-202ENST00000371122 CDC42SE1Q9NRR8 79 aa5.33□□□□□ -1.56
SMARCA1-202ENST00000371122 DNAH6Q9C0G6 4158 aa5.33□□□□□ -1.56
SMARCA1-202ENST00000371122 KRTAP29-1A8MX34 341 aaPredicted RBP5.32□□□□□ -1.56
SMARCA1-202ENST00000371122 Q6ZRN7 208 aaPredicted RBP5.32□□□□□ -1.56
SMARCA1-202ENST00000371122 Q6ZR54 194 aa5.32□□□□□ -1.56
SMARCA1-202ENST00000371122 KTN1-AS1Q86SY8 53 aa5.31□□□□□ -1.56
SMARCA1-202ENST00000371122 ZCCHC13Q8WW36 166 aaKnown RBP5.3□□□□□ -1.56
SMARCA1-202ENST00000371122 A0A1B0GU33 70 aa5.28□□□□□ -1.56
SMARCA1-202ENST00000371122 STARD9Q9P2P6 4700 aa5.28□□□□□ -1.56
SMARCA1-202ENST00000371122 Q6ZSA8 131 aa5.28□□□□□ -1.56
SMARCA1-202ENST00000371122 KMT2AQ03164 3969 aa5.27□□□□□ -1.57
SMARCA1-202ENST00000371122 ALMS1Q8TCU4 4167 aa5.26□□□□□ -1.57
SMARCA1-202ENST00000371122 LINC01558Q9Y6Z2 57 aa5.26□□□□□ -1.57
SMARCA1-202ENST00000371122 Q75L30 129 aa5.25□□□□□ -1.57
SMARCA1-202ENST00000371122 Q5VSD8 79 aa5.25□□□□□ -1.57
SMARCA1-202ENST00000371122 RBM12B-AS1Q9P1G2 102 aa5.24□□□□□ -1.57
SMARCA1-202ENST00000371122 PLECQ15149 4684 aaKnown RBP5.24□□□□□ -1.57
SMARCA1-202ENST00000371122 VPS13DQ5THJ4 4388 aa5.24□□□□□ -1.57
SMARCA1-202ENST00000371122 LINC00483Q53H64 154 aa5.23□□□□□ -1.57
SMARCA1-202ENST00000371122 KRTAP13-2Q52LG2 175 aa5.23□□□□□ -1.57
SMARCA1-202ENST00000371122 LCA10Q71F78 164 aa5.22□□□□□ -1.57
SMARCA1-202ENST00000371122 SPATA8Q6RVD6 105 aa5.22□□□□□ -1.57
SMARCA1-202ENST00000371122 LCE6AA0A183 80 aa5.2□□□□□ -1.58
SMARCA1-202ENST00000371122 CSAG1Q6PB30 78 aa5.19□□□□□ -1.58
SMARCA1-202ENST00000371122 KRTAP13-1Q8IUC0 172 aa5.18□□□□□ -1.58
SMARCA1-202ENST00000371122 SACSQ9NZJ4 4579 aa5.17□□□□□ -1.58
SMARCA1-202ENST00000371122 DMAC1Q96GE9 116 aa5.15□□□□□ -1.58
SMARCA1-202ENST00000371122 HECTD4Q9Y4D8 3996 aa5.15□□□□□ -1.59
SMARCA1-202ENST00000371122 M0R2T5 61 aa5.14□□□□□ -1.59
SMARCA1-202ENST00000371122 ADM2Q7Z4H4 148 aa5.13□□□□□ -1.59
SMARCA1-202ENST00000371122 DNAH17Q9UFH2 4485 aa5.13□□□□□ -1.59
SMARCA1-202ENST00000371122 RYR2Q92736 4967 aa5.13□□□□□ -1.59
SMARCA1-202ENST00000371122 CAMK2N1Q7Z7J9 78 aa5.13□□□□□ -1.59
SMARCA1-202ENST00000371122 DNAH2Q9P225 4427 aa5.12□□□□□ -1.59
SMARCA1-202ENST00000371122 S4R3F8 94 aa5.12□□□□□ -1.59
SMARCA1-202ENST00000371122 HYDINQ4G0P3 5121 aa5.12□□□□□ -1.59
SMARCA1-202ENST00000371122 DNAH8Q96JB1 4490 aa5.11□□□□□ -1.59
SMARCA1-202ENST00000371122 FAT2Q9NYQ8 4349 aa5.09□□□□□ -1.59
SMARCA1-202ENST00000371122 KMT2CQ8NEZ4 4911 aaKnown RBP5.08□□□□□ -1.6
SMARCA1-202ENST00000371122 R4GN34 69 aa5.07□□□□□ -1.6
SMARCA1-202ENST00000371122 RYR3Q15413 4870 aa5.06□□□□□ -1.6
SMARCA1-202ENST00000371122 DNAH11Q96DT5 4516 aa5.04□□□□□ -1.6
SMARCA1-202ENST00000371122 PKD1P98161 4303 aa5.04□□□□□ -1.6
SMARCA1-202ENST00000371122 M0QZ58 72 aa5.02□□□□□ -1.61
SMARCA1-202ENST00000371122 H1FX-AS1Q4G0G2 97 aa5.02□□□□□ -1.61
SMARCA1-202ENST00000371122 H3BS24 57 aa5.01□□□□□ -1.61
SMARCA1-202ENST00000371122 RPL37P61927 97 aaKnown RBP5.01□□□□□ -1.61
SMARCA1-202ENST00000371122 KRTAP1-4P0C5Y4 121 aa4.99□□□□□ -1.61
SMARCA1-202ENST00000371122 ASB16-AS1Q495Z4 193 aa4.95□□□□□ -1.62
SMARCA1-202ENST00000371122 DNAH5Q8TE73 4624 aa4.95□□□□□ -1.62
SMARCA1-202ENST00000371122 DYNC1H1Q14204 4646 aaKnown RBP4.95□□□□□ -1.62
SMARCA1-202ENST00000371122 SEC61BP60468 96 aaKnown RBP4.94□□□□□ -1.62
SMARCA1-202ENST00000371122 A6NN06 94 aa4.94□□□□□ -1.62
SMARCA1-202ENST00000371122 ROMO1P60602 79 aa4.91□□□□□ -1.62
SMARCA1-202ENST00000371122 LUZP6Q538Z0 58 aa4.88□□□□□ -1.63
SMARCA1-202ENST00000371122 A0A1B0GVY2 172 aa4.86□□□□□ -1.63
SMARCA1-202ENST00000371122 A8MUU9 505 aa4.86□□□□□ -1.63
SMARCA1-202ENST00000371122 PKHD1P08F94 4074 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms