RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.32□□□□□ -1.4
PRPF38B-201ENST00000370021 RTL8CO15255 209 aa6.3□□□□□ -1.4
PRPF38B-201ENST00000370021 Q5W150 140 aa6.28□□□□□ -1.4
PRPF38B-201ENST00000370021 ZNF706Q9Y5V0 76 aaPredicted RBP6.28□□□□□ -1.4
PRPF38B-201ENST00000370021 C8orf87E5RJ46 101 aa6.27□□□□□ -1.41
PRPF38B-201ENST00000370021 PSORS1C2Q9UIG4 136 aa6.27□□□□□ -1.41
PRPF38B-201ENST00000370021 TGP01266 2768 aa6.27□□□□□ -1.41
PRPF38B-201ENST00000370021 MIR22HGQ0VDD5 57 aa6.25□□□□□ -1.41
PRPF38B-201ENST00000370021 SPACA4Q8TDM5 124 aa6.25□□□□□ -1.41
PRPF38B-201ENST00000370021 NBDYA0A0U1RRE5 68 aa6.24□□□□□ -1.41
PRPF38B-201ENST00000370021 SPRR1BP22528 89 aa6.22□□□□□ -1.41
PRPF38B-201ENST00000370021 UQCR11O14957 56 aa6.22□□□□□ -1.41
PRPF38B-201ENST00000370021 IGLV5-52A0A0A0MRZ9 124 aa6.21□□□□□ -1.41
PRPF38B-201ENST00000370021 C4orf48Q5BLP8 95 aa6.21□□□□□ -1.41
PRPF38B-201ENST00000370021 LYSTQ99698 3801 aa6.21□□□□□ -1.42
PRPF38B-201ENST00000370021 Q8N1X5 172 aa6.2□□□□□ -1.42
PRPF38B-201ENST00000370021 Q96NJ1 140 aa6.2□□□□□ -1.42
PRPF38B-201ENST00000370021 LINC01554Q52M75 96 aa6.19□□□□□ -1.42
PRPF38B-201ENST00000370021 CSAG1Q6PB30 78 aa6.19□□□□□ -1.42
PRPF38B-201ENST00000370021 H3BS24 57 aa6.19□□□□□ -1.42
PRPF38B-201ENST00000370021 ZNF861PO60384 105 aa6.19□□□□□ -1.42
PRPF38B-201ENST00000370021 Q6ZR54 194 aa6.19□□□□□ -1.42
PRPF38B-201ENST00000370021 FBN3Q75N90 2809 aa6.18□□□□□ -1.42
PRPF38B-201ENST00000370021 WWC2-AS2Q96NR7 200 aa6.17□□□□□ -1.42
PRPF38B-201ENST00000370021 LY6G6CO95867 125 aa6.17□□□□□ -1.42
PRPF38B-201ENST00000370021 CRIPTQ9P021 101 aa6.17□□□□□ -1.42
PRPF38B-201ENST00000370021 APLNQ9ULZ1 77 aa6.16□□□□□ -1.42
PRPF38B-201ENST00000370021 FAM229AH3BQW9 127 aa6.14□□□□□ -1.43
PRPF38B-201ENST00000370021 DNAH10Q8IVF4 4471 aa6.14□□□□□ -1.43
PRPF38B-201ENST00000370021 DNAH9Q9NYC9 4486 aa6.14□□□□□ -1.43
PRPF38B-201ENST00000370021 A0A087WTM6 91 aa6.14□□□□□ -1.43
PRPF38B-201ENST00000370021 HUWE1Q7Z6Z7 4374 aaKnown RBP6.12□□□□□ -1.43
PRPF38B-201ENST00000370021 DYNC2H1Q8NCM8 4307 aaKnown RBP6.08□□□□□ -1.44
PRPF38B-201ENST00000370021 NUPR2A6NF83 97 aa6.08□□□□□ -1.44
PRPF38B-201ENST00000370021 IGLV7-43P04211 117 aa6.08□□□□□ -1.44
PRPF38B-201ENST00000370021 DNAH7Q8WXX0 4024 aa6.08□□□□□ -1.44
PRPF38B-201ENST00000370021 C1orf134Q5TEV5 83 aa6.06□□□□□ -1.44
PRPF38B-201ENST00000370021 KRTAP13-1Q8IUC0 172 aa6.06□□□□□ -1.44
PRPF38B-201ENST00000370021 DMAC1Q96GE9 116 aa6.05□□□□□ -1.44
PRPF38B-201ENST00000370021 SSBP3-AS1Q7Z2R9 100 aa6.04□□□□□ -1.44
PRPF38B-201ENST00000370021 PLAC8Q9NZF1 115 aa6.04□□□□□ -1.44
PRPF38B-201ENST00000370021 C9orf92A6NGG3 77 aa6.03□□□□□ -1.44
PRPF38B-201ENST00000370021 PLA2G1BP04054 148 aaKnown RBP6.02□□□□□ -1.45
PRPF38B-201ENST00000370021 LINC00483Q53H64 154 aa6.01□□□□□ -1.45
PRPF38B-201ENST00000370021 SPATA8Q6RVD6 105 aa6.01□□□□□ -1.45
PRPF38B-201ENST00000370021 ASB16-AS1Q495Z4 193 aa6.01□□□□□ -1.45
PRPF38B-201ENST00000370021 K7ERS5 55 aa5.99□□□□□ -1.45
PRPF38B-201ENST00000370021 TYMSOSQ8TAI1 123 aa5.98□□□□□ -1.45
PRPF38B-201ENST00000370021 MEGF8Q7Z7M0 2845 aa5.98□□□□□ -1.45
PRPF38B-201ENST00000370021 Q6ZRN7 208 aaPredicted RBP5.96□□□□□ -1.45
PRPF38B-201ENST00000370021 A0A0D9SG42 100 aa5.94□□□□□ -1.46
PRPF38B-201ENST00000370021 SMR3BP02814 79 aaPredicted RBP5.92□□□□□ -1.46
PRPF38B-201ENST00000370021 A0A1B0GU33 70 aa5.91□□□□□ -1.46
PRPF38B-201ENST00000370021 PLECQ15149 4684 aaKnown RBP5.91□□□□□ -1.46
PRPF38B-201ENST00000370021 HECTD4Q9Y4D8 3996 aa5.91□□□□□ -1.46
PRPF38B-201ENST00000370021 KRTAP10-2P60368 255 aa5.9□□□□□ -1.46
PRPF38B-201ENST00000370021 SPINT4Q6UDR6 99 aa5.9□□□□□ -1.46
PRPF38B-201ENST00000370021 PRKDCP78527 4128 aaKnown RBP5.89□□□□□ -1.47
PRPF38B-201ENST00000370021 KRTAP13-2Q52LG2 175 aa5.88□□□□□ -1.47
PRPF38B-201ENST00000370021 KRTAP13-3Q3SY46 172 aa5.87□□□□□ -1.47
PRPF38B-201ENST00000370021 FRAS1Q86XX4 4008 aa5.86□□□□□ -1.47
PRPF38B-201ENST00000370021 DNHD1Q96M86 4753 aa5.85□□□□□ -1.47
PRPF38B-201ENST00000370021 VPS13DQ5THJ4 4388 aa5.83□□□□□ -1.48
PRPF38B-201ENST00000370021 DNAH8Q96JB1 4490 aa5.83□□□□□ -1.48
PRPF38B-201ENST00000370021 DNAH2Q9P225 4427 aa5.83□□□□□ -1.48
PRPF38B-201ENST00000370021 Q6ZSA8 131 aa5.82□□□□□ -1.48
PRPF38B-201ENST00000370021 STARD9Q9P2P6 4700 aa5.82□□□□□ -1.48
PRPF38B-201ENST00000370021 LINC00304Q8N9R0 145 aa5.82□□□□□ -1.48
PRPF38B-201ENST00000370021 KRTAP10-1P60331 282 aa5.81□□□□□ -1.48
PRPF38B-201ENST00000370021 KRTAP25-1Q3LHN0 102 aa5.79□□□□□ -1.48
PRPF38B-201ENST00000370021 H0YAA0 97 aa5.78□□□□□ -1.48
PRPF38B-201ENST00000370021 DNAH17Q9UFH2 4485 aa5.77□□□□□ -1.49
PRPF38B-201ENST00000370021 KMT2AQ03164 3969 aa5.77□□□□□ -1.49
PRPF38B-201ENST00000370021 ALMS1Q8TCU4 4167 aa5.76□□□□□ -1.49
PRPF38B-201ENST00000370021 ROMO1P60602 79 aa5.75□□□□□ -1.49
PRPF38B-201ENST00000370021 H1FX-AS1Q4G0G2 97 aa5.75□□□□□ -1.49
PRPF38B-201ENST00000370021 A8MUU9 505 aa5.74□□□□□ -1.49
PRPF38B-201ENST00000370021 KRTAP16-1A8MUX0 517 aa5.74□□□□□ -1.49
PRPF38B-201ENST00000370021 DNAH6Q9C0G6 4158 aa5.68□□□□□ -1.5
PRPF38B-201ENST00000370021 C10orf95Q9H7T3 257 aa5.68□□□□□ -1.5
PRPF38B-201ENST00000370021 COX6B2Q6YFQ2 88 aa5.66□□□□□ -1.5
PRPF38B-201ENST00000370021 DNAH5Q8TE73 4624 aa5.65□□□□□ -1.5
PRPF38B-201ENST00000370021 DNAH11Q96DT5 4516 aa5.65□□□□□ -1.51
PRPF38B-201ENST00000370021 KRTAP1-4P0C5Y4 121 aa5.65□□□□□ -1.51
PRPF38B-201ENST00000370021 PKD1P98161 4303 aa5.62□□□□□ -1.51
PRPF38B-201ENST00000370021 RPL37P61927 97 aaKnown RBP5.62□□□□□ -1.51
PRPF38B-201ENST00000370021 NDUFAF8A1L188 74 aa5.62□□□□□ -1.51
PRPF38B-201ENST00000370021 KRTAP3-1Q9BYR8 98 aa5.56□□□□□ -1.52
PRPF38B-201ENST00000370021 FAT2Q9NYQ8 4349 aa5.55□□□□□ -1.52
PRPF38B-201ENST00000370021 P0C880 135 aa5.52□□□□□ -1.53
PRPF38B-201ENST00000370021 LRP1BQ9NZR2 4599 aa5.5□□□□□ -1.53
PRPF38B-201ENST00000370021 HYDINQ4G0P3 5121 aa5.49□□□□□ -1.53
PRPF38B-201ENST00000370021 S4R3F8 94 aa5.48□□□□□ -1.53
PRPF38B-201ENST00000370021 VPS13BQ7Z7G8 4022 aa5.47□□□□□ -1.53
PRPF38B-201ENST00000370021 TPRXLQ17RH7 258 aa5.46□□□□□ -1.54
PRPF38B-201ENST00000370021 C20orf166-AS1Q96NR2 134 aa5.45□□□□□ -1.54
PRPF38B-201ENST00000370021 KRTAP13-4Q3LI77 160 aa5.43□□□□□ -1.54
PRPF38B-201ENST00000370021 SACSQ9NZJ4 4579 aa5.37□□□□□ -1.55
PRPF38B-201ENST00000370021 PKHD1P08F94 4074 aa5.36□□□□□ -1.55
PRPF38B-201ENST00000370021 PKHD1L1Q86WI1 4243 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms