RNA–Protein interactions for RNA: ENST00000369528.9

SIKE1-203, Transcript of suppressor of IKBKE 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SIKE1, Length 5,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIKE1-203ENST00000369528 TRIOO75962 3097 aa7.83□□□□□ -1.16
SIKE1-203ENST00000369528 LAMA3Q16787 3333 aa7.82□□□□□ -1.16
SIKE1-203ENST00000369528 HIVEP1P15822 2718 aa7.82□□□□□ -1.16
SIKE1-203ENST00000369528 MKI67P46013 3256 aaKnown RBP7.79□□□□□ -1.16
SIKE1-203ENST00000369528 NIPBLQ6KC79 2804 aaeCLIP7.78□□□□□ -1.16
SIKE1-203ENST00000369528 TENM4Q6N022 2769 aa7.78□□□□□ -1.16
SIKE1-203ENST00000369528 LAMA2P24043 3122 aaKnown RBP7.76□□□□□ -1.17
SIKE1-203ENST00000369528 XIRP2A4UGR9 3374 aa7.76□□□□□ -1.17
SIKE1-203ENST00000369528 VCANP13611 3396 aa7.76□□□□□ -1.17
SIKE1-203ENST00000369528 KALRNO60229 2985 aa7.75□□□□□ -1.17
SIKE1-203ENST00000369528 TACC2O95359 2948 aa7.75□□□□□ -1.17
SIKE1-203ENST00000369528 FLNCQ14315 2725 aa7.74□□□□□ -1.17
SIKE1-203ENST00000369528 KRTAP12-1P59990 96 aa7.74□□□□□ -1.17
SIKE1-203ENST00000369528 VPS13AQ96RL7 3174 aa7.68□□□□□ -1.18
SIKE1-203ENST00000369528 LRBAP50851 2863 aa7.67□□□□□ -1.18
SIKE1-203ENST00000369528 ASH1LQ9NR48 2969 aaKnown RBP7.65□□□□□ -1.19
SIKE1-203ENST00000369528 ATMQ13315 3056 aa7.64□□□□□ -1.19
SIKE1-203ENST00000369528 LAMA1P25391 3075 aa7.62□□□□□ -1.19
SIKE1-203ENST00000369528 DMXL2Q8TDJ6 3036 aa7.62□□□□□ -1.19
SIKE1-203ENST00000369528 UNC80Q8N2C7 3258 aa7.61□□□□□ -1.19
SIKE1-203ENST00000369528 COL12A1Q99715 3063 aa7.6□□□□□ -1.19
SIKE1-203ENST00000369528 FREM2Q5SZK8 3169 aa7.58□□□□□ -1.2
SIKE1-203ENST00000369528 BRCA2P51587 3418 aa7.58□□□□□ -1.2
SIKE1-203ENST00000369528 INE1O15225 51 aa7.58□□□□□ -1.2
SIKE1-203ENST00000369528 CRYBG3Q68DQ2 2970 aa7.57□□□□□ -1.2
SIKE1-203ENST00000369528 REV3LO60673 3130 aa7.55□□□□□ -1.2
SIKE1-203ENST00000369528 CELSR2Q9HCU4 2923 aa7.55□□□□□ -1.2
SIKE1-203ENST00000369528 CDH23Q9H251 3354 aa7.53□□□□□ -1.2
SIKE1-203ENST00000369528 KRTAP15-1Q3LI76 137 aa7.51□□□□□ -1.21
SIKE1-203ENST00000369528 KRTAP3-1Q9BYR8 98 aa7.5□□□□□ -1.21
SIKE1-203ENST00000369528 DCHS2Q6V1P9 2916 aa7.47□□□□□ -1.21
SIKE1-203ENST00000369528 ADGRG4Q8IZF6 3080 aa7.45□□□□□ -1.22
SIKE1-203ENST00000369528 TENM3Q9P273 2699 aa7.45□□□□□ -1.22
SIKE1-203ENST00000369528 FRYLO94915 3013 aa7.44□□□□□ -1.22
SIKE1-203ENST00000369528 TENM1Q9UKZ4 2725 aa7.44□□□□□ -1.22
SIKE1-203ENST00000369528 CELSR3Q9NYQ7 3312 aa7.42□□□□□ -1.22
SIKE1-203ENST00000369528 TGP01266 2768 aa7.41□□□□□ -1.22
SIKE1-203ENST00000369528 ZZEF1O43149 2961 aa7.41□□□□□ -1.22
SIKE1-203ENST00000369528 KRTAP10-6P60371 365 aaPredicted RBP7.4□□□□□ -1.22
SIKE1-203ENST00000369528 WDFY3Q8IZQ1 3526 aa7.4□□□□□ -1.23
SIKE1-203ENST00000369528 NBEAQ8NFP9 2946 aa7.38□□□□□ -1.23
SIKE1-203ENST00000369528 MYO15AQ9UKN7 3530 aa7.36□□□□□ -1.23
SIKE1-203ENST00000369528 TENM2Q9NT68 2774 aa7.36□□□□□ -1.23
SIKE1-203ENST00000369528 DNAH14Q0VDD8 3507 aa7.36□□□□□ -1.23
SIKE1-203ENST00000369528 EYSQ5T1H1 3165 aa7.35□□□□□ -1.23
SIKE1-203ENST00000369528 SPEGQ15772 3267 aa7.32□□□□□ -1.24
SIKE1-203ENST00000369528 BOD1L1Q8NFC6 3051 aa7.31□□□□□ -1.24
SIKE1-203ENST00000369528 ZANQ9Y493 2812 aa7.3□□□□□ -1.24
SIKE1-203ENST00000369528 NF1P21359 2839 aa7.27□□□□□ -1.24
SIKE1-203ENST00000369528 COL6A3P12111 3177 aa7.24□□□□□ -1.25
SIKE1-203ENST00000369528 HRNRQ86YZ3 2850 aaPredicted RBP7.23□□□□□ -1.25
SIKE1-203ENST00000369528 CFAP47Q6ZTR5 3102 aa7.21□□□□□ -1.26
SIKE1-203ENST00000369528 SZT2Q5T011 3432 aa7.2□□□□□ -1.26
SIKE1-203ENST00000369528 TNRC18O15417 2968 aaPredicted RBP7.16□□□□□ -1.26
SIKE1-203ENST00000369528 FBN2P35556 2912 aa7.12□□□□□ -1.27
SIKE1-203ENST00000369528 CELSR1Q9NYQ6 3014 aa7.11□□□□□ -1.27
SIKE1-203ENST00000369528 KRTAP3-2Q9BYR7 98 aa7.08□□□□□ -1.28
SIKE1-203ENST00000369528 SPTBN5Q9NRC6 3674 aaKnown RBP7.05□□□□□ -1.28
SIKE1-203ENST00000369528 PDZD2O15018 2839 aa7.05□□□□□ -1.28
SIKE1-203ENST00000369528 KRTAP23-1A1A580 65 aa7.05□□□□□ -1.28
SIKE1-203ENST00000369528 KRTAP10-12P60413 245 aa7.02□□□□□ -1.29
SIKE1-203ENST00000369528 MXRA5Q9NR99 2828 aa7.02□□□□□ -1.29
SIKE1-203ENST00000369528 KRTAP3-3Q9BYR6 98 aa6.99□□□□□ -1.29
SIKE1-203ENST00000369528 PKD1L1Q8TDX9 2849 aa6.97□□□□□ -1.29
SIKE1-203ENST00000369528 VWFP04275 2813 aa6.89□□□□□ -1.31
SIKE1-203ENST00000369528 MT1HL1P0DM35 61 aa6.89□□□□□ -1.31
SIKE1-203ENST00000369528 KRTAP12-3P60328 96 aa6.89□□□□□ -1.31
SIKE1-203ENST00000369528 DMXL1Q9Y485 3027 aa6.87□□□□□ -1.31
SIKE1-203ENST00000369528 DMDP11532 3685 aa6.82□□□□□ -1.32
SIKE1-203ENST00000369528 CRCT1Q9UGL9 99 aa6.81□□□□□ -1.32
SIKE1-203ENST00000369528 MUC3AQ02505 3323 aa6.8□□□□□ -1.32
SIKE1-203ENST00000369528 LOC400499M0QZD8 3231 aa6.8□□□□□ -1.32
SIKE1-203ENST00000369528 LCE3AQ5TA76 89 aa6.75□□□□□ -1.33
SIKE1-203ENST00000369528 ASPMQ8IZT6 3477 aa6.7□□□□□ -1.34
SIKE1-203ENST00000369528 KRTAP10-4P60372 401 aaPredicted RBP6.63□□□□□ -1.35
SIKE1-203ENST00000369528 ZFHX4Q86UP3 3567 aa6.63□□□□□ -1.35
SIKE1-203ENST00000369528 ZFHX3Q15911 3703 aa6.62□□□□□ -1.35
SIKE1-203ENST00000369528 SPENQ96T58 3664 aaKnown RBP6.62□□□□□ -1.35
SIKE1-203ENST00000369528 FBN3Q75N90 2809 aa6.61□□□□□ -1.35
SIKE1-203ENST00000369528 DCHS1Q96JQ0 3298 aa6.6□□□□□ -1.35
SIKE1-203ENST00000369528 MEGF8Q7Z7M0 2845 aa6.59□□□□□ -1.35
SIKE1-203ENST00000369528 RELNP78509 3460 aa6.55□□□□□ -1.36
SIKE1-203ENST00000369528 KRTAP10-5P60370 271 aa6.54□□□□□ -1.36
SIKE1-203ENST00000369528 SRRM2Q9UQ35 2752 aaKnown RBP6.54□□□□□ -1.36
SIKE1-203ENST00000369528 KRTAP4-5Q9BYR2 181 aa6.52□□□□□ -1.37
SIKE1-203ENST00000369528 OTOGQ6ZRI0 2925 aa6.48□□□□□ -1.37
SIKE1-203ENST00000369528 SMG1Q96Q15 3661 aaKnown RBP6.48□□□□□ -1.37
SIKE1-203ENST00000369528 FBN1P35555 2871 aaKnown RBP6.47□□□□□ -1.37
SIKE1-203ENST00000369528 LORP23490 312 aaPredicted RBP6.47□□□□□ -1.37
SIKE1-203ENST00000369528 ANK3Q12955 4377 aaKnown RBP6.46□□□□□ -1.37
SIKE1-203ENST00000369528 COL7A1Q02388 2944 aa6.41□□□□□ -1.38
SIKE1-203ENST00000369528 NBPF19A0A087WUL8 3843 aa6.4□□□□□ -1.38
SIKE1-203ENST00000369528 KRTAP8-1Q8IUC2 63 aa6.35□□□□□ -1.39
SIKE1-203ENST00000369528 ALMS1Q8TCU4 4167 aa6.29□□□□□ -1.4
SIKE1-203ENST00000369528 LAMA5O15230 3695 aa6.29□□□□□ -1.4
SIKE1-203ENST00000369528 HUWE1Q7Z6Z7 4374 aaKnown RBP6.26□□□□□ -1.41
SIKE1-203ENST00000369528 CSMD1Q96PZ7 3565 aa6.24□□□□□ -1.41
SIKE1-203ENST00000369528 SVEP1Q4LDE5 3571 aa6.21□□□□□ -1.42
SIKE1-203ENST00000369528 CSMD2Q7Z408 3487 aa6.16□□□□□ -1.42
SIKE1-203ENST00000369528 CUBNO60494 3623 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms