RNA–Protein interactions for RNA: ENST00000369528.9

SIKE1-203, Transcript of suppressor of IKBKE 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SIKE1, Length 5,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIKE1-203ENST00000369528 DCAF8L2P0C7V8 631 aa26.15■■□□□ 1.78
SIKE1-203ENST00000369528 PELP1Q8IZL8 1130 aaKnown RBP25.6■■□□□ 1.69
SIKE1-203ENST00000369528 SUPT5HO00267 1087 aaKnown RBP24.91■■□□□ 1.58
SIKE1-203ENST00000369528 MYT1Q01538 1121 aa24.62■■□□□ 1.53
SIKE1-203ENST00000369528 ERICH6Q7L0X2 663 aa24.45■■□□□ 1.5
SIKE1-203ENST00000369528 NISCHQ9Y2I1 1504 aa24.39■■□□□ 1.5
SIKE1-203ENST00000369528 CCER1Q8TC90 406 aaPredicted RBP24.39■■□□□ 1.49
SIKE1-203ENST00000369528 CENPBP07199 599 aaPredicted RBP24.36■■□□□ 1.49
SIKE1-203ENST00000369528 SHROOM4Q9ULL8 1493 aa24.26■■□□□ 1.47
SIKE1-203ENST00000369528 APLP2Q06481 763 aa24.24■■□□□ 1.47
SIKE1-203ENST00000369528 EHMT2Q96KQ7 1210 aa24.15■■□□□ 1.46
SIKE1-203ENST00000369528 ZEB1P37275 1124 aaPredicted RBP24.11■■□□□ 1.45
SIKE1-203ENST00000369528 PCGF6Q9BYE7 350 aa23.98■■□□□ 1.43
SIKE1-203ENST00000369528 FAM9AQ8IZU1 332 aaPredicted RBP23.76■■□□□ 1.39
SIKE1-203ENST00000369528 NEFLP07196 543 aa23.74■■□□□ 1.39
SIKE1-203ENST00000369528 TTBK1Q5TCY1 1321 aaPredicted RBP23.51■■□□□ 1.35
SIKE1-203ENST00000369528 YTHDC1Q96MU7 727 aaKnown RBP23.37■■□□□ 1.33
SIKE1-203ENST00000369528 DAXXQ9UER7 740 aaPredicted RBP23.18■■□□□ 1.3
SIKE1-203ENST00000369528 TRIM41Q8WV44 630 aa23.12■■□□□ 1.29
SIKE1-203ENST00000369528 RANGAP1P46060 587 aaPredicted RBP23.1■■□□□ 1.29
SIKE1-203ENST00000369528 ATP1B4Q9UN42 357 aaPredicted RBP23.04■■□□□ 1.28
SIKE1-203ENST00000369528 HRCP23327 699 aa22.98■■□□□ 1.27
SIKE1-203ENST00000369528 TRIM26Q12899 539 aaPredicted RBP22.95■■□□□ 1.26
SIKE1-203ENST00000369528 UBTFP17480 764 aaKnown RBP22.91■■□□□ 1.26
SIKE1-203ENST00000369528 RTL5Q5HYW3 569 aaPredicted RBP22.83■■□□□ 1.24
SIKE1-203ENST00000369528 ZNF316A6NFI3 1004 aaPredicted RBP22.6■■□□□ 1.21
SIKE1-203ENST00000369528 PPARGC1BQ86YN6 1023 aaKnown RBP22.52■■□□□ 1.2
SIKE1-203ENST00000369528 POLR3GLQ9BT43 218 aa22.41■■□□□ 1.18
SIKE1-203ENST00000369528 DIEXFQ68CQ4 756 aaKnown RBP22.4■■□□□ 1.18
SIKE1-203ENST00000369528 CLSPNQ9HAW4 1339 aa22.35■■□□□ 1.17
SIKE1-203ENST00000369528 MYT1LQ9UL68 1186 aa22.26■■□□□ 1.15
SIKE1-203ENST00000369528 ITGAEP38570 1179 aa22.25■■□□□ 1.15
SIKE1-203ENST00000369528 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.22■■□□□ 1.15
SIKE1-203ENST00000369528 HNRNPUL2Q1KMD3 747 aaKnown RBP22.22■■□□□ 1.15
SIKE1-203ENST00000369528 GTF3C3Q9Y5Q9 886 aa22.19■■□□□ 1.14
SIKE1-203ENST00000369528 CDK11AQ9UQ88 783 aaPredicted RBP22.18■■□□□ 1.14
SIKE1-203ENST00000369528 CNGB1Q14028 1251 aaPredicted RBP22.09■■□□□ 1.13
SIKE1-203ENST00000369528 LOC105371045A0A1W2PR82 267 aa22.04■■□□□ 1.12
SIKE1-203ENST00000369528 BCANQ96GW7 911 aa22.02■■□□□ 1.12
SIKE1-203ENST00000369528 CHIC1Q5VXU3 224 aa22■■□□□ 1.11
SIKE1-203ENST00000369528 ANP32CO43423 234 aa21.9■■□□□ 1.1
SIKE1-203ENST00000369528 SLC4A1APQ9BWU0 796 aaKnown RBP21.89■■□□□ 1.1
SIKE1-203ENST00000369528 ANP32AP39687 249 aaKnown RBP21.87■■□□□ 1.09
SIKE1-203ENST00000369528 ACIN1Q9UKV3 1341 aaKnown RBP21.87■■□□□ 1.09
SIKE1-203ENST00000369528 GLIPR1L2Q4G1C9 344 aa21.85■■□□□ 1.09
SIKE1-203ENST00000369528 ZBTB47Q9UFB7 747 aaPredicted RBP21.85■■□□□ 1.09
SIKE1-203ENST00000369528 EIF5BO60841 1220 aaKnown RBP21.78■■□□□ 1.08
SIKE1-203ENST00000369528 ANP32BQ92688 251 aaKnown RBP21.68■■□□□ 1.06
SIKE1-203ENST00000369528 FAM50AQ14320 339 aaKnown RBP21.66■■□□□ 1.06
SIKE1-203ENST00000369528 NEUROD1Q13562 356 aa21.65■■□□□ 1.06
SIKE1-203ENST00000369528 TRIM52Q96A61 297 aa21.64■■□□□ 1.05
SIKE1-203ENST00000369528 CANXP27824 592 aaKnown RBP21.62■■□□□ 1.05
SIKE1-203ENST00000369528 NPM2Q86SE8 214 aaKnown RBP21.51■■□□□ 1.03
SIKE1-203ENST00000369528 FKBP8Q14318 412 aa21.41■■□□□ 1.02
SIKE1-203ENST00000369528 NEFMP07197 916 aa21.4■■□□□ 1.02
SIKE1-203ENST00000369528 ZNF326Q5BKZ1 582 aaKnown RBP21.39■■□□□ 1.01
SIKE1-203ENST00000369528 UPF2Q9HAU5 1272 aaKnown RBP21.38■■□□□ 1.01
SIKE1-203ENST00000369528 HSP90AA1P07900 732 aaKnown RBP21.35■■□□□ 1.01
SIKE1-203ENST00000369528 BCL11AQ9H165 835 aa21.27■□□□□ 0.99
SIKE1-203ENST00000369528 NBR1Q14596 966 aa21.21■□□□□ 0.99
SIKE1-203ENST00000369528 PABPN1Q86U42 306 aaKnown RBP eCLIP21.17■□□□□ 0.98
SIKE1-203ENST00000369528 SLC24A1O60721 1099 aa21.16■□□□□ 0.98
SIKE1-203ENST00000369528 HNRNPUQ00839 825 aaKnown RBP eCLIP21.15■□□□□ 0.98
SIKE1-203ENST00000369528 CCDC136Q96JN2 1154 aa21.12■□□□□ 0.97
SIKE1-203ENST00000369528 FBLN2P98095 1184 aa21.11■□□□□ 0.97
SIKE1-203ENST00000369528 ABCC9O60706 1549 aa21.1■□□□□ 0.97
SIKE1-203ENST00000369528 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.07■□□□□ 0.96
SIKE1-203ENST00000369528 ANP32EQ9BTT0 268 aa21.05■□□□□ 0.96
SIKE1-203ENST00000369528 TNNT2P45379 298 aaPredicted RBP21.03■□□□□ 0.96
SIKE1-203ENST00000369528 SCAF1Q9H7N4 1312 aaKnown RBP21.01■□□□□ 0.95
SIKE1-203ENST00000369528 DDRGK1Q96HY6 314 aa21■□□□□ 0.95
SIKE1-203ENST00000369528 TONSLQ96HA7 1378 aa20.99■□□□□ 0.95
SIKE1-203ENST00000369528 FAM9BQ8IZU0 186 aa20.98■□□□□ 0.95
SIKE1-203ENST00000369528 TRIM44Q96DX7 344 aaPredicted RBP20.96■□□□□ 0.95
SIKE1-203ENST00000369528 ARXQ96QS3 562 aa20.96■□□□□ 0.95
SIKE1-203ENST00000369528 DDX10Q13206 875 aaKnown RBP20.93■□□□□ 0.94
SIKE1-203ENST00000369528 CSRNP3Q8WYN3 585 aa20.92■□□□□ 0.94
SIKE1-203ENST00000369528 BECN1Q14457 450 aa20.91■□□□□ 0.94
SIKE1-203ENST00000369528 P3H3Q8IVL6 736 aa20.91■□□□□ 0.94
SIKE1-203ENST00000369528 ZNF777Q9ULD5 760 aaPredicted RBP20.89■□□□□ 0.93
SIKE1-203ENST00000369528 DCAF1Q9Y4B6 1507 aa20.88■□□□□ 0.93
SIKE1-203ENST00000369528 ERICH6BQ5W0A0 696 aa20.87■□□□□ 0.93
SIKE1-203ENST00000369528 ARID3CA6NKF2 412 aa20.86■□□□□ 0.93
SIKE1-203ENST00000369528 TMC1Q8TDI8 760 aa20.86■□□□□ 0.93
SIKE1-203ENST00000369528 GOLGA6L22H0YM25 854 aa20.82■□□□□ 0.92
SIKE1-203ENST00000369528 NCLP19338 710 aaKnown RBP20.81■□□□□ 0.92
SIKE1-203ENST00000369528 ESF1Q9H501 851 aaKnown RBP20.81■□□□□ 0.92
SIKE1-203ENST00000369528 PPM1GO15355 546 aaPredicted RBP20.8■□□□□ 0.92
SIKE1-203ENST00000369528 MRS2Q9HD23 443 aa20.78■□□□□ 0.92
SIKE1-203ENST00000369528 CDK11BP21127 795 aaKnown RBP20.77■□□□□ 0.91
SIKE1-203ENST00000369528 WDR43Q15061 677 aaKnown RBP eCLIP20.77■□□□□ 0.91
SIKE1-203ENST00000369528 SALL2Q9Y467 1007 aaPredicted RBP20.76■□□□□ 0.91
SIKE1-203ENST00000369528 MYH16Q9H6N6 1097 aa20.73■□□□□ 0.91
SIKE1-203ENST00000369528 MIER1Q8N108 512 aa20.73■□□□□ 0.91
SIKE1-203ENST00000369528 STAG3Q9UJ98 1225 aa20.71■□□□□ 0.91
SIKE1-203ENST00000369528 CHGAP10645 457 aaKnown RBP20.68■□□□□ 0.9
SIKE1-203ENST00000369528 PTMAP06454 111 aaKnown RBP20.68■□□□□ 0.9
SIKE1-203ENST00000369528 IRX6P78412 446 aaPredicted RBP20.68■□□□□ 0.9
SIKE1-203ENST00000369528 NAP1L5Q96NT1 182 aaPredicted RBP20.68■□□□□ 0.9
SIKE1-203ENST00000369528 DNTTIP2Q5QJE6 756 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms