RNA–Protein interactions for RNA: ENST00000361587.3

HIPK1-202, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best)

Gene HIPK1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-202ENST00000361587 KRTAP21-3Q3LHN1 58 aa5.68□□□□□ -1.5
HIPK1-202ENST00000361587 CHD6Q8TD26 2715 aa5.67□□□□□ -1.5
HIPK1-202ENST00000361587 LRBAP50851 2863 aa5.67□□□□□ -1.5
HIPK1-202ENST00000361587 SETXQ7Z333 2677 aaKnown RBP5.64□□□□□ -1.51
HIPK1-202ENST00000361587 COL12A1Q99715 3063 aa5.64□□□□□ -1.51
HIPK1-202ENST00000361587 HRNRQ86YZ3 2850 aaPredicted RBP5.64□□□□□ -1.51
HIPK1-202ENST00000361587 XP32Q5T750 250 aa5.64□□□□□ -1.51
HIPK1-202ENST00000361587 MAP1AP78559 2803 aaPredicted RBP5.63□□□□□ -1.51
HIPK1-202ENST00000361587 P0C880 135 aa5.63□□□□□ -1.51
HIPK1-202ENST00000361587 MYO15AQ9UKN7 3530 aa5.63□□□□□ -1.51
HIPK1-202ENST00000361587 LOC400499M0QZD8 3231 aa5.63□□□□□ -1.51
HIPK1-202ENST00000361587 KRTAP10-8P60410 259 aa5.62□□□□□ -1.51
HIPK1-202ENST00000361587 UTP20O75691 2785 aaKnown RBP5.62□□□□□ -1.51
HIPK1-202ENST00000361587 ZZEF1O43149 2961 aa5.61□□□□□ -1.51
HIPK1-202ENST00000361587 H0YAA0 97 aa5.61□□□□□ -1.51
HIPK1-202ENST00000361587 GCN1Q92616 2671 aaKnown RBP5.61□□□□□ -1.51
HIPK1-202ENST00000361587 KRTAP1-4P0C5Y4 121 aa5.61□□□□□ -1.51
HIPK1-202ENST00000361587 UBR5O95071 2799 aaPredicted RBP5.61□□□□□ -1.51
HIPK1-202ENST00000361587 KALRNO60229 2985 aa5.61□□□□□ -1.51
HIPK1-202ENST00000361587 ITPR1Q14643 2758 aa5.6□□□□□ -1.51
HIPK1-202ENST00000361587 TEP1Q99973 2627 aaKnown RBP5.59□□□□□ -1.52
HIPK1-202ENST00000361587 TPRXLQ17RH7 258 aa5.57□□□□□ -1.52
HIPK1-202ENST00000361587 APCP25054 2843 aa5.57□□□□□ -1.52
HIPK1-202ENST00000361587 STAB2Q8WWQ8 2551 aa5.57□□□□□ -1.52
HIPK1-202ENST00000361587 PRO2289Q9P1D8 64 aa5.54□□□□□ -1.52
HIPK1-202ENST00000361587 KMT2BQ9UMN6 2715 aaPredicted RBP5.53□□□□□ -1.52
HIPK1-202ENST00000361587 NOTCH1P46531 2555 aa5.53□□□□□ -1.52
HIPK1-202ENST00000361587 COL6A5A8TX70 2615 aa5.53□□□□□ -1.52
HIPK1-202ENST00000361587 TACC2O95359 2948 aa5.51□□□□□ -1.53
HIPK1-202ENST00000361587 ITPR2Q14571 2701 aa5.5□□□□□ -1.53
HIPK1-202ENST00000361587 WDFY3Q8IZQ1 3526 aa5.49□□□□□ -1.53
HIPK1-202ENST00000361587 NSD1Q96L73 2696 aaPredicted RBP5.48□□□□□ -1.53
HIPK1-202ENST00000361587 A0A1B0GVY2 172 aa5.48□□□□□ -1.53
HIPK1-202ENST00000361587 NBEAL2Q6ZNJ1 2754 aa5.47□□□□□ -1.53
HIPK1-202ENST00000361587 DMDP11532 3685 aa5.47□□□□□ -1.53
HIPK1-202ENST00000361587 ZANQ9Y493 2812 aa5.46□□□□□ -1.53
HIPK1-202ENST00000361587 HIVEP1P15822 2718 aa5.46□□□□□ -1.54
HIPK1-202ENST00000361587 BAHCC1Q9P281 2608 aa5.45□□□□□ -1.54
HIPK1-202ENST00000361587 KRTAP10-10P60014 251 aa5.44□□□□□ -1.54
HIPK1-202ENST00000361587 KRTAP13-3Q3SY46 172 aa5.43□□□□□ -1.54
HIPK1-202ENST00000361587 MUC3AQ02505 3323 aa5.42□□□□□ -1.54
HIPK1-202ENST00000361587 CFAP47Q6ZTR5 3102 aa5.39□□□□□ -1.55
HIPK1-202ENST00000361587 FBN2P35556 2912 aa5.37□□□□□ -1.55
HIPK1-202ENST00000361587 CELSR2Q9HCU4 2923 aa5.36□□□□□ -1.55
HIPK1-202ENST00000361587 NIPBLQ6KC79 2804 aaeCLIP5.36□□□□□ -1.55
HIPK1-202ENST00000361587 DCHS2Q6V1P9 2916 aa5.36□□□□□ -1.55
HIPK1-202ENST00000361587 RELNP78509 3460 aa5.35□□□□□ -1.55
HIPK1-202ENST00000361587 LAMA5O15230 3695 aa5.35□□□□□ -1.55
HIPK1-202ENST00000361587 CRYBG3Q68DQ2 2970 aa5.33□□□□□ -1.56
HIPK1-202ENST00000361587 MXRA5Q9NR99 2828 aa5.31□□□□□ -1.56
HIPK1-202ENST00000361587 ZFHX4Q86UP3 3567 aa5.31□□□□□ -1.56
HIPK1-202ENST00000361587 DCHS1Q96JQ0 3298 aa5.31□□□□□ -1.56
HIPK1-202ENST00000361587 ASPMQ8IZT6 3477 aa5.28□□□□□ -1.56
HIPK1-202ENST00000361587 KRTAP13-4Q3LI77 160 aa5.28□□□□□ -1.56
HIPK1-202ENST00000361587 PDZD2O15018 2839 aa5.28□□□□□ -1.56
HIPK1-202ENST00000361587 NF1P21359 2839 aa5.27□□□□□ -1.57
HIPK1-202ENST00000361587 KRTAP12-2P59991 146 aa5.25□□□□□ -1.57
HIPK1-202ENST00000361587 BSNQ9UPA5 3926 aa5.24□□□□□ -1.57
HIPK1-202ENST00000361587 TENM4Q6N022 2769 aa5.21□□□□□ -1.57
HIPK1-202ENST00000361587 SMG1Q96Q15 3661 aaKnown RBP5.2□□□□□ -1.58
HIPK1-202ENST00000361587 CSMD1Q96PZ7 3565 aa5.19□□□□□ -1.58
HIPK1-202ENST00000361587 ASH1LQ9NR48 2969 aaKnown RBP5.19□□□□□ -1.58
HIPK1-202ENST00000361587 KRTAP12-1P59990 96 aa5.18□□□□□ -1.58
HIPK1-202ENST00000361587 ANK3Q12955 4377 aaKnown RBP5.16□□□□□ -1.58
HIPK1-202ENST00000361587 SPENQ96T58 3664 aaKnown RBP5.12□□□□□ -1.59
HIPK1-202ENST00000361587 OTOGQ6ZRI0 2925 aa5.1□□□□□ -1.59
HIPK1-202ENST00000361587 KRTAP15-1Q3LI76 137 aa5.05□□□□□ -1.6
HIPK1-202ENST00000361587 TENM3Q9P273 2699 aa5.05□□□□□ -1.6
HIPK1-202ENST00000361587 TENM1Q9UKZ4 2725 aa5.05□□□□□ -1.6
HIPK1-202ENST00000361587 CELSR1Q9NYQ6 3014 aa5.04□□□□□ -1.6
HIPK1-202ENST00000361587 NBPF19A0A087WUL8 3843 aa5.04□□□□□ -1.6
HIPK1-202ENST00000361587 KRTAP3-1Q9BYR8 98 aa5.04□□□□□ -1.6
HIPK1-202ENST00000361587 SVEP1Q4LDE5 3571 aa4.99□□□□□ -1.61
HIPK1-202ENST00000361587 INE1O15225 51 aa4.98□□□□□ -1.61
HIPK1-202ENST00000361587 VWFP04275 2813 aa4.97□□□□□ -1.61
HIPK1-202ENST00000361587 KRTAP10-6P60371 365 aaPredicted RBP4.95□□□□□ -1.62
HIPK1-202ENST00000361587 TGP01266 2768 aa4.93□□□□□ -1.62
HIPK1-202ENST00000361587 CSMD2Q7Z408 3487 aa4.91□□□□□ -1.62
HIPK1-202ENST00000361587 FBN1P35555 2871 aaKnown RBP4.88□□□□□ -1.63
HIPK1-202ENST00000361587 TRRAPQ9Y4A5 3859 aa4.81□□□□□ -1.64
HIPK1-202ENST00000361587 TENM2Q9NT68 2774 aa4.79□□□□□ -1.64
HIPK1-202ENST00000361587 KRTAP10-12P60413 245 aa4.78□□□□□ -1.64
HIPK1-202ENST00000361587 ZFHX3Q15911 3703 aa4.78□□□□□ -1.65
HIPK1-202ENST00000361587 HUWE1Q7Z6Z7 4374 aaKnown RBP4.77□□□□□ -1.65
HIPK1-202ENST00000361587 AKAP9Q99996 3911 aa4.76□□□□□ -1.65
HIPK1-202ENST00000361587 KRTAP23-1A1A580 65 aa4.76□□□□□ -1.65
HIPK1-202ENST00000361587 VPS13CQ709C8 3753 aa4.76□□□□□ -1.65
HIPK1-202ENST00000361587 KRTAP3-2Q9BYR7 98 aa4.75□□□□□ -1.65
HIPK1-202ENST00000361587 ZNF469Q96JG9 3925 aaPredicted RBP4.74□□□□□ -1.65
HIPK1-202ENST00000361587 KRTAP3-3Q9BYR6 98 aa4.71□□□□□ -1.66
HIPK1-202ENST00000361587 PKD1L1Q8TDX9 2849 aa4.71□□□□□ -1.66
HIPK1-202ENST00000361587 MT1HL1P0DM35 61 aa4.69□□□□□ -1.66
HIPK1-202ENST00000361587 KRTAP12-3P60328 96 aa4.65□□□□□ -1.66
HIPK1-202ENST00000361587 DNAH9Q9NYC9 4486 aa4.62□□□□□ -1.67
HIPK1-202ENST00000361587 CUBNO60494 3623 aa4.61□□□□□ -1.67
HIPK1-202ENST00000361587 CRCT1Q9UGL9 99 aa4.61□□□□□ -1.67
HIPK1-202ENST00000361587 ALMS1Q8TCU4 4167 aa4.58□□□□□ -1.68
HIPK1-202ENST00000361587 MEGF8Q7Z7M0 2845 aa4.56□□□□□ -1.68
HIPK1-202ENST00000361587 FBN3Q75N90 2809 aa4.56□□□□□ -1.68
HIPK1-202ENST00000361587 LCE3AQ5TA76 89 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms