RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 C20orf166-AS1Q96NR2 134 aa6.68□□□□□ -1.34
CNOT4-203ENST00000361528 SETD2Q9BYW2 2564 aaPredicted RBP6.67□□□□□ -1.34
CNOT4-203ENST00000361528 IGKV2D-30A0A075B6S6 120 aa6.67□□□□□ -1.34
CNOT4-203ENST00000361528 Q6ZSA8 131 aa6.67□□□□□ -1.34
CNOT4-203ENST00000361528 K7ERS5 55 aa6.65□□□□□ -1.34
CNOT4-203ENST00000361528 KRTAP10-3P60369 221 aa6.64□□□□□ -1.35
CNOT4-203ENST00000361528 F8P00451 2351 aa6.64□□□□□ -1.35
CNOT4-203ENST00000361528 TEP1Q99973 2627 aaKnown RBP6.63□□□□□ -1.35
CNOT4-203ENST00000361528 SPINT4Q6UDR6 99 aa6.63□□□□□ -1.35
CNOT4-203ENST00000361528 A0A087WTM6 91 aa6.62□□□□□ -1.35
CNOT4-203ENST00000361528 WWC2-AS2Q96NR7 200 aa6.62□□□□□ -1.35
CNOT4-203ENST00000361528 ANAPC11Q9NYG5 84 aa6.62□□□□□ -1.35
CNOT4-203ENST00000361528 NDUFAF8A1L188 74 aa6.62□□□□□ -1.35
CNOT4-203ENST00000361528 NSD1Q96L73 2696 aaPredicted RBP6.62□□□□□ -1.35
CNOT4-203ENST00000361528 SSBP3-AS1Q7Z2R9 100 aa6.61□□□□□ -1.35
CNOT4-203ENST00000361528 DNAH1Q9P2D7 4330 aa6.61□□□□□ -1.35
CNOT4-203ENST00000361528 A0A1B0GU33 70 aa6.6□□□□□ -1.35
CNOT4-203ENST00000361528 C14orf177Q52M58 125 aa6.59□□□□□ -1.35
CNOT4-203ENST00000361528 PSORS1C2Q9UIG4 136 aa6.59□□□□□ -1.35
CNOT4-203ENST00000361528 MAST4O15021 2626 aa6.59□□□□□ -1.35
CNOT4-203ENST00000361528 KRTAP15-1Q3LI76 137 aa6.58□□□□□ -1.36
CNOT4-203ENST00000361528 SPINK6Q6UWN8 80 aa6.58□□□□□ -1.36
CNOT4-203ENST00000361528 H1FX-AS1Q4G0G2 97 aa6.56□□□□□ -1.36
CNOT4-203ENST00000361528 CRIPTQ9P021 101 aa6.53□□□□□ -1.36
CNOT4-203ENST00000361528 ATRQ13535 2644 aa6.52□□□□□ -1.37
CNOT4-203ENST00000361528 SPINK1P00995 79 aa6.52□□□□□ -1.37
CNOT4-203ENST00000361528 SRRM2Q9UQ35 2752 aaKnown RBP6.51□□□□□ -1.37
CNOT4-203ENST00000361528 TENM1Q9UKZ4 2725 aa6.49□□□□□ -1.37
CNOT4-203ENST00000361528 FBN1P35555 2871 aaKnown RBP6.46□□□□□ -1.38
CNOT4-203ENST00000361528 TYMSOSQ8TAI1 123 aa6.45□□□□□ -1.38
CNOT4-203ENST00000361528 CSMD3Q7Z407 3707 aa6.44□□□□□ -1.38
CNOT4-203ENST00000361528 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.44□□□□□ -1.38
CNOT4-203ENST00000361528 VWFP04275 2813 aa6.43□□□□□ -1.38
CNOT4-203ENST00000361528 TPRXLQ17RH7 258 aa6.42□□□□□ -1.38
CNOT4-203ENST00000361528 LUZP6Q538Z0 58 aa6.41□□□□□ -1.38
CNOT4-203ENST00000361528 TRRAPQ9Y4A5 3859 aa6.41□□□□□ -1.38
CNOT4-203ENST00000361528 COL6A5A8TX70 2615 aa6.41□□□□□ -1.38
CNOT4-203ENST00000361528 STAB1Q9NY15 2570 aa6.4□□□□□ -1.38
CNOT4-203ENST00000361528 CIRBP-AS1Q8TBR5 109 aa6.4□□□□□ -1.39
CNOT4-203ENST00000361528 SPACA4Q8TDM5 124 aa6.4□□□□□ -1.39
CNOT4-203ENST00000361528 Q8N1X5 172 aa6.38□□□□□ -1.39
CNOT4-203ENST00000361528 KRTAP24-1Q3LI83 254 aa6.37□□□□□ -1.39
CNOT4-203ENST00000361528 KRTAP1-5Q9BYS1 174 aa6.37□□□□□ -1.39
CNOT4-203ENST00000361528 COX6B2Q6YFQ2 88 aa6.35□□□□□ -1.39
CNOT4-203ENST00000361528 RPL37P61927 97 aaKnown RBP6.35□□□□□ -1.39
CNOT4-203ENST00000361528 NBDYA0A0U1RRE5 68 aa6.34□□□□□ -1.39
CNOT4-203ENST00000361528 PKD1L1Q8TDX9 2849 aa6.34□□□□□ -1.39
CNOT4-203ENST00000361528 KRTAP10-11P60412 298 aa6.31□□□□□ -1.4
CNOT4-203ENST00000361528 FLG2Q5D862 2391 aaPredicted RBP6.3□□□□□ -1.4
CNOT4-203ENST00000361528 LYSTQ99698 3801 aa6.26□□□□□ -1.41
CNOT4-203ENST00000361528 DNAH10Q8IVF4 4471 aa6.25□□□□□ -1.41
CNOT4-203ENST00000361528 ANK2Q01484 3957 aa6.25□□□□□ -1.41
CNOT4-203ENST00000361528 SEC61BP60468 96 aaKnown RBP6.24□□□□□ -1.41
CNOT4-203ENST00000361528 NOTCH1P46531 2555 aa6.24□□□□□ -1.41
CNOT4-203ENST00000361528 FRAS1Q86XX4 4008 aa6.24□□□□□ -1.41
CNOT4-203ENST00000361528 C10orf95Q9H7T3 257 aa6.23□□□□□ -1.41
CNOT4-203ENST00000361528 UBE2DNLQ8IWF7 75 aa6.22□□□□□ -1.41
CNOT4-203ENST00000361528 MGAM2Q2M2H8 2515 aa6.22□□□□□ -1.41
CNOT4-203ENST00000361528 NBEAL1Q6ZS30 2694 aa6.2□□□□□ -1.42
CNOT4-203ENST00000361528 MEGF8Q7Z7M0 2845 aa6.2□□□□□ -1.42
CNOT4-203ENST00000361528 DNAH8Q96JB1 4490 aa6.19□□□□□ -1.42
CNOT4-203ENST00000361528 KRTAP3-1Q9BYR8 98 aa6.17□□□□□ -1.42
CNOT4-203ENST00000361528 TENM3Q9P273 2699 aa6.16□□□□□ -1.42
CNOT4-203ENST00000361528 Q6ZRN7 208 aaPredicted RBP6.16□□□□□ -1.42
CNOT4-203ENST00000361528 COL7A1Q02388 2944 aa6.14□□□□□ -1.43
CNOT4-203ENST00000361528 CMYA5Q8N3K9 4069 aa6.13□□□□□ -1.43
CNOT4-203ENST00000361528 DNAH9Q9NYC9 4486 aa6.12□□□□□ -1.43
CNOT4-203ENST00000361528 KRTAP3-3Q9BYR6 98 aa6.12□□□□□ -1.43
CNOT4-203ENST00000361528 KRTAP3-2Q9BYR7 98 aa6.12□□□□□ -1.43
CNOT4-203ENST00000361528 APLNQ9ULZ1 77 aa6.11□□□□□ -1.43
CNOT4-203ENST00000361528 KRTAP13-2Q52LG2 175 aa6.1□□□□□ -1.43
CNOT4-203ENST00000361528 DNHD1Q96M86 4753 aa6.08□□□□□ -1.44
CNOT4-203ENST00000361528 DNAH3Q8TD57 4116 aa6.08□□□□□ -1.44
CNOT4-203ENST00000361528 KRTAP10-6P60371 365 aaPredicted RBP6.07□□□□□ -1.44
CNOT4-203ENST00000361528 S4R3F8 94 aa6.07□□□□□ -1.44
CNOT4-203ENST00000361528 XP32Q5T750 250 aa6.07□□□□□ -1.44
CNOT4-203ENST00000361528 A0A0D9SG42 100 aa6.06□□□□□ -1.44
CNOT4-203ENST00000361528 KRTAP13-4Q3LI77 160 aa6.06□□□□□ -1.44
CNOT4-203ENST00000361528 VPS13DQ5THJ4 4388 aa6.04□□□□□ -1.44
CNOT4-203ENST00000361528 LOC100996750A0A140TA64 210 aa6.03□□□□□ -1.44
CNOT4-203ENST00000361528 KRTAP4-6Q9BYQ5 205 aa6.03□□□□□ -1.44
CNOT4-203ENST00000361528 TGP01266 2768 aa6.02□□□□□ -1.45
CNOT4-203ENST00000361528 DNAH17Q9UFH2 4485 aa6.02□□□□□ -1.45
CNOT4-203ENST00000361528 RPS29P62273 56 aaKnown RBP5.96□□□□□ -1.46
CNOT4-203ENST00000361528 STAB2Q8WWQ8 2551 aa5.96□□□□□ -1.46
CNOT4-203ENST00000361528 PLAC4Q8WY50 150 aa5.95□□□□□ -1.46
CNOT4-203ENST00000361528 KRTAP12-2P59991 146 aa5.95□□□□□ -1.46
CNOT4-203ENST00000361528 KRTAP21-3Q3LHN1 58 aa5.95□□□□□ -1.46
CNOT4-203ENST00000361528 HUWE1Q7Z6Z7 4374 aaKnown RBP5.95□□□□□ -1.46
CNOT4-203ENST00000361528 DYNC2H1Q8NCM8 4307 aaKnown RBP5.92□□□□□ -1.46
CNOT4-203ENST00000361528 HECTD4Q9Y4D8 3996 aa5.91□□□□□ -1.46
CNOT4-203ENST00000361528 KRTAP1-4P0C5Y4 121 aa5.9□□□□□ -1.46
CNOT4-203ENST00000361528 KRTAP12-1P59990 96 aa5.9□□□□□ -1.46
CNOT4-203ENST00000361528 PRKDCP78527 4128 aaKnown RBP5.89□□□□□ -1.47
CNOT4-203ENST00000361528 DNAH7Q8WXX0 4024 aa5.89□□□□□ -1.47
CNOT4-203ENST00000361528 CAMK2N1Q7Z7J9 78 aa5.89□□□□□ -1.47
CNOT4-203ENST00000361528 FBN3Q75N90 2809 aa5.89□□□□□ -1.47
CNOT4-203ENST00000361528 KMT2AQ03164 3969 aa5.8□□□□□ -1.48
CNOT4-203ENST00000361528 DNAH6Q9C0G6 4158 aa5.8□□□□□ -1.48
CNOT4-203ENST00000361528 C9orf92A6NGG3 77 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms