RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 KRTAP10-1P60331 282 aa9.7□□□□□ -0.86
SCAF1-201ENST00000360565 VWFP04275 2813 aa9.7□□□□□ -0.86
SCAF1-201ENST00000360565 Q6ZR54 194 aa9.69□□□□□ -0.86
SCAF1-201ENST00000360565 Q6ZRN7 208 aaPredicted RBP9.68□□□□□ -0.86
SCAF1-201ENST00000360565 PDZD2O15018 2839 aa9.64□□□□□ -0.87
SCAF1-201ENST00000360565 A0A087X002 238 aa9.64□□□□□ -0.87
SCAF1-201ENST00000360565 NOTCH2NLQ7Z3S9 236 aa9.64□□□□□ -0.87
SCAF1-201ENST00000360565 CUBNO60494 3623 aa9.64□□□□□ -0.87
SCAF1-201ENST00000360565 SPENQ96T58 3664 aaKnown RBP9.64□□□□□ -0.87
SCAF1-201ENST00000360565 FBN1P35555 2871 aaKnown RBP9.64□□□□□ -0.87
SCAF1-201ENST00000360565 SPINK7P58062 85 aa9.6□□□□□ -0.87
SCAF1-201ENST00000360565 LCA10Q71F78 164 aa9.6□□□□□ -0.87
SCAF1-201ENST00000360565 RBM12B-AS1Q9P1G2 102 aa9.6□□□□□ -0.87
SCAF1-201ENST00000360565 OTOGQ6ZRI0 2925 aa9.57□□□□□ -0.88
SCAF1-201ENST00000360565 LCE6AA0A183 80 aa9.57□□□□□ -0.88
SCAF1-201ENST00000360565 KRTAP13-1Q8IUC0 172 aa9.55□□□□□ -0.88
SCAF1-201ENST00000360565 A0A0D9SG42 100 aa9.54□□□□□ -0.88
SCAF1-201ENST00000360565 J3QL48 77 aa9.53□□□□□ -0.88
SCAF1-201ENST00000360565 A0A1B0GU33 70 aa9.51□□□□□ -0.89
SCAF1-201ENST00000360565 PKD1L1Q8TDX9 2849 aa9.51□□□□□ -0.89
SCAF1-201ENST00000360565 DMAC1Q96GE9 116 aa9.5□□□□□ -0.89
SCAF1-201ENST00000360565 CSMD2Q7Z408 3487 aa9.47□□□□□ -0.89
SCAF1-201ENST00000360565 SPINT4Q6UDR6 99 aa9.46□□□□□ -0.9
SCAF1-201ENST00000360565 BSNQ9UPA5 3926 aa9.43□□□□□ -0.9
SCAF1-201ENST00000360565 PRAC1Q96KF2 57 aa9.42□□□□□ -0.9
SCAF1-201ENST00000360565 COX6B2Q6YFQ2 88 aa9.42□□□□□ -0.9
SCAF1-201ENST00000360565 TGP01266 2768 aa9.41□□□□□ -0.9
SCAF1-201ENST00000360565 CRIPTQ9P021 101 aa9.41□□□□□ -0.9
SCAF1-201ENST00000360565 LINC01554Q52M75 96 aa9.4□□□□□ -0.9
SCAF1-201ENST00000360565 NBPF19A0A087WUL8 3843 aa9.4□□□□□ -0.91
SCAF1-201ENST00000360565 ZFHX3Q15911 3703 aa9.39□□□□□ -0.91
SCAF1-201ENST00000360565 ASB16-AS1Q495Z4 193 aa9.37□□□□□ -0.91
SCAF1-201ENST00000360565 KRTAP13-2Q52LG2 175 aa9.37□□□□□ -0.91
SCAF1-201ENST00000360565 Q6ZSA8 131 aa9.37□□□□□ -0.91
SCAF1-201ENST00000360565 TENM2Q9NT68 2774 aa9.31□□□□□ -0.92
SCAF1-201ENST00000360565 Q5VSD8 79 aa9.28□□□□□ -0.92
SCAF1-201ENST00000360565 A8MU10 97 aa9.27□□□□□ -0.93
SCAF1-201ENST00000360565 H3BS24 57 aa9.24□□□□□ -0.93
SCAF1-201ENST00000360565 S4R3F8 94 aa9.23□□□□□ -0.93
SCAF1-201ENST00000360565 CSAG1Q6PB30 78 aa9.22□□□□□ -0.93
SCAF1-201ENST00000360565 SPATA8Q6RVD6 105 aa9.14□□□□□ -0.95
SCAF1-201ENST00000360565 H1FX-AS1Q4G0G2 97 aa9.14□□□□□ -0.95
SCAF1-201ENST00000360565 RPS29P62273 56 aaKnown RBP9.13□□□□□ -0.95
SCAF1-201ENST00000360565 VPS13CQ709C8 3753 aa9.11□□□□□ -0.95
SCAF1-201ENST00000360565 A6NN06 94 aa9.09□□□□□ -0.95
SCAF1-201ENST00000360565 RPL37P61927 97 aaKnown RBP9.09□□□□□ -0.95
SCAF1-201ENST00000360565 TRRAPQ9Y4A5 3859 aa9.06□□□□□ -0.96
SCAF1-201ENST00000360565 KRTAP1-4P0C5Y4 121 aa9.04□□□□□ -0.96
SCAF1-201ENST00000360565 CAMK2N1Q7Z7J9 78 aa9.01□□□□□ -0.97
SCAF1-201ENST00000360565 R4GN34 69 aa9.01□□□□□ -0.97
SCAF1-201ENST00000360565 SRRM2Q9UQ35 2752 aaKnown RBP8.99□□□□□ -0.97
SCAF1-201ENST00000360565 FBN3Q75N90 2809 aa8.98□□□□□ -0.97
SCAF1-201ENST00000360565 SEC61BP60468 96 aaKnown RBP8.97□□□□□ -0.97
SCAF1-201ENST00000360565 ADM2Q7Z4H4 148 aa8.96□□□□□ -0.98
SCAF1-201ENST00000360565 ROMO1P60602 79 aa8.95□□□□□ -0.98
SCAF1-201ENST00000360565 A8MUU9 505 aa8.92□□□□□ -0.98
SCAF1-201ENST00000360565 ANK3Q12955 4377 aaKnown RBP8.91□□□□□ -0.98
SCAF1-201ENST00000360565 C20orf166-AS1Q96NR2 134 aa8.9□□□□□ -0.99
SCAF1-201ENST00000360565 M0QZ58 72 aa8.89□□□□□ -0.99
SCAF1-201ENST00000360565 KRTAP21-3Q3LHN1 58 aa8.84□□□□□ -0.99
SCAF1-201ENST00000360565 KRTAP16-1A8MUX0 517 aa8.84□□□□□ -1
SCAF1-201ENST00000360565 M0R2T5 61 aa8.84□□□□□ -1
SCAF1-201ENST00000360565 ZNF469Q96JG9 3925 aaPredicted RBP8.81□□□□□ -1
SCAF1-201ENST00000360565 MEGF8Q7Z7M0 2845 aa8.77□□□□□ -1.01
SCAF1-201ENST00000360565 LUZP6Q538Z0 58 aa8.76□□□□□ -1.01
SCAF1-201ENST00000360565 KRTAP13-3Q3SY46 172 aa8.73□□□□□ -1.01
SCAF1-201ENST00000360565 KRTAP25-1Q3LHN0 102 aa8.73□□□□□ -1.01
SCAF1-201ENST00000360565 COL7A1Q02388 2944 aa8.72□□□□□ -1.01
SCAF1-201ENST00000360565 XP32Q5T750 250 aa8.63□□□□□ -1.03
SCAF1-201ENST00000360565 H0YAA0 97 aa8.61□□□□□ -1.03
SCAF1-201ENST00000360565 A0A1B0GVY2 172 aa8.44□□□□□ -1.06
SCAF1-201ENST00000360565 KRTAP10-8P60410 259 aa8.39□□□□□ -1.07
SCAF1-201ENST00000360565 P0C880 135 aa8.39□□□□□ -1.07
SCAF1-201ENST00000360565 PLAC4Q8WY50 150 aa8.38□□□□□ -1.07
SCAF1-201ENST00000360565 C10orf95Q9H7T3 257 aa8.37□□□□□ -1.07
SCAF1-201ENST00000360565 TPRXLQ17RH7 258 aa8.36□□□□□ -1.07
SCAF1-201ENST00000360565 AKAP9Q99996 3911 aa8.36□□□□□ -1.07
SCAF1-201ENST00000360565 CSMD3Q7Z407 3707 aa8.35□□□□□ -1.07
SCAF1-201ENST00000360565 NDUFAF8A1L188 74 aa8.33□□□□□ -1.08
SCAF1-201ENST00000360565 KRTAP3-1Q9BYR8 98 aa8.27□□□□□ -1.08
SCAF1-201ENST00000360565 A0A0A0MQY5 61 aa8.27□□□□□ -1.09
SCAF1-201ENST00000360565 HUWE1Q7Z6Z7 4374 aaKnown RBP8.25□□□□□ -1.09
SCAF1-201ENST00000360565 TNP1P09430 55 aa8.16□□□□□ -1.1
SCAF1-201ENST00000360565 KRTAP12-2P59991 146 aa8.03□□□□□ -1.12
SCAF1-201ENST00000360565 PP632Q6XCG6 107 aa7.99□□□□□ -1.13
SCAF1-201ENST00000360565 KRTAP10-6P60371 365 aaPredicted RBP7.97□□□□□ -1.13
SCAF1-201ENST00000360565 KRTAP13-4Q3LI77 160 aa7.95□□□□□ -1.14
SCAF1-201ENST00000360565 DNAH9Q9NYC9 4486 aa7.95□□□□□ -1.14
SCAF1-201ENST00000360565 KRTAP12-1P59990 96 aa7.94□□□□□ -1.14
SCAF1-201ENST00000360565 KRTAP10-4P60372 401 aaPredicted RBP7.92□□□□□ -1.14
SCAF1-201ENST00000360565 DNHD1Q96M86 4753 aa7.88□□□□□ -1.15
SCAF1-201ENST00000360565 PLECQ15149 4684 aaKnown RBP7.87□□□□□ -1.15
SCAF1-201ENST00000360565 MT1HL1P0DM35 61 aa7.86□□□□□ -1.15
SCAF1-201ENST00000360565 KRTAP10-10P60014 251 aa7.84□□□□□ -1.15
SCAF1-201ENST00000360565 DNAH10Q8IVF4 4471 aa7.81□□□□□ -1.16
SCAF1-201ENST00000360565 KRTAP3-3Q9BYR6 98 aa7.79□□□□□ -1.16
SCAF1-201ENST00000360565 DNAH11Q96DT5 4516 aa7.79□□□□□ -1.16
SCAF1-201ENST00000360565 DNAH1Q9P2D7 4330 aa7.78□□□□□ -1.16
SCAF1-201ENST00000360565 KRTAP3-2Q9BYR7 98 aa7.76□□□□□ -1.17
SCAF1-201ENST00000360565 DNAH5Q8TE73 4624 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms