RNA–Protein interactions for RNA: ENST00000359171.8

NUP98-203, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 7,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-203ENST00000359171 VPS13AQ96RL7 3174 aa7.43□□□□□ -1.22
NUP98-203ENST00000359171 KRTAP21-3Q3LHN1 58 aa7.43□□□□□ -1.22
NUP98-203ENST00000359171 MKI67P46013 3256 aaKnown RBP7.43□□□□□ -1.22
NUP98-203ENST00000359171 PRO2289Q9P1D8 64 aa7.41□□□□□ -1.22
NUP98-203ENST00000359171 UTP20O75691 2785 aaKnown RBP7.41□□□□□ -1.22
NUP98-203ENST00000359171 TENM4Q6N022 2769 aa7.4□□□□□ -1.22
NUP98-203ENST00000359171 KRTAP13-3Q3SY46 172 aa7.39□□□□□ -1.23
NUP98-203ENST00000359171 NBEAQ8NFP9 2946 aa7.39□□□□□ -1.23
NUP98-203ENST00000359171 UNC80Q8N2C7 3258 aa7.38□□□□□ -1.23
NUP98-203ENST00000359171 DMXL2Q8TDJ6 3036 aa7.37□□□□□ -1.23
NUP98-203ENST00000359171 ATMQ13315 3056 aa7.37□□□□□ -1.23
NUP98-203ENST00000359171 KRTAP10-10P60014 251 aa7.36□□□□□ -1.23
NUP98-203ENST00000359171 FREM2Q5SZK8 3169 aa7.34□□□□□ -1.23
NUP98-203ENST00000359171 ASH1LQ9NR48 2969 aaKnown RBP7.33□□□□□ -1.24
NUP98-203ENST00000359171 XIRP2A4UGR9 3374 aa7.31□□□□□ -1.24
NUP98-203ENST00000359171 REV3LO60673 3130 aa7.31□□□□□ -1.24
NUP98-203ENST00000359171 KALRNO60229 2985 aa7.31□□□□□ -1.24
NUP98-203ENST00000359171 COL12A1Q99715 3063 aa7.29□□□□□ -1.24
NUP98-203ENST00000359171 TENM3Q9P273 2699 aa7.27□□□□□ -1.25
NUP98-203ENST00000359171 KRTAP12-2P59991 146 aa7.25□□□□□ -1.25
NUP98-203ENST00000359171 KRTAP13-4Q3LI77 160 aa7.22□□□□□ -1.25
NUP98-203ENST00000359171 ADGRG4Q8IZF6 3080 aa7.22□□□□□ -1.25
NUP98-203ENST00000359171 CELSR2Q9HCU4 2923 aa7.21□□□□□ -1.25
NUP98-203ENST00000359171 FRYLO94915 3013 aa7.17□□□□□ -1.26
NUP98-203ENST00000359171 LAMA1P25391 3075 aa7.17□□□□□ -1.26
NUP98-203ENST00000359171 BOD1L1Q8NFC6 3051 aa7.16□□□□□ -1.26
NUP98-203ENST00000359171 KRTAP12-1P59990 96 aa7.15□□□□□ -1.27
NUP98-203ENST00000359171 LRBAP50851 2863 aa7.14□□□□□ -1.27
NUP98-203ENST00000359171 ZZEF1O43149 2961 aa7.14□□□□□ -1.27
NUP98-203ENST00000359171 ZANQ9Y493 2812 aa7.13□□□□□ -1.27
NUP98-203ENST00000359171 TGP01266 2768 aa7.12□□□□□ -1.27
NUP98-203ENST00000359171 DCHS2Q6V1P9 2916 aa7.11□□□□□ -1.27
NUP98-203ENST00000359171 TNRC18O15417 2968 aaPredicted RBP7.09□□□□□ -1.27
NUP98-203ENST00000359171 CDH23Q9H251 3354 aa7.02□□□□□ -1.29
NUP98-203ENST00000359171 CELSR3Q9NYQ7 3312 aa7.01□□□□□ -1.29
NUP98-203ENST00000359171 KRTAP3-1Q9BYR8 98 aa7□□□□□ -1.29
NUP98-203ENST00000359171 TENM1Q9UKZ4 2725 aa6.99□□□□□ -1.29
NUP98-203ENST00000359171 SPTBN5Q9NRC6 3674 aaKnown RBP6.98□□□□□ -1.29
NUP98-203ENST00000359171 VCANP13611 3396 aa6.97□□□□□ -1.29
NUP98-203ENST00000359171 NF1P21359 2839 aa6.96□□□□□ -1.3
NUP98-203ENST00000359171 SZT2Q5T011 3432 aa6.96□□□□□ -1.3
NUP98-203ENST00000359171 CRYBG3Q68DQ2 2970 aa6.9□□□□□ -1.3
NUP98-203ENST00000359171 CFAP47Q6ZTR5 3102 aa6.9□□□□□ -1.31
NUP98-203ENST00000359171 KRTAP15-1Q3LI76 137 aa6.9□□□□□ -1.31
NUP98-203ENST00000359171 TENM2Q9NT68 2774 aa6.89□□□□□ -1.31
NUP98-203ENST00000359171 KRTAP10-6P60371 365 aaPredicted RBP6.88□□□□□ -1.31
NUP98-203ENST00000359171 EYSQ5T1H1 3165 aa6.86□□□□□ -1.31
NUP98-203ENST00000359171 FBN2P35556 2912 aa6.86□□□□□ -1.31
NUP98-203ENST00000359171 INE1O15225 51 aa6.84□□□□□ -1.31
NUP98-203ENST00000359171 COL6A3P12111 3177 aa6.81□□□□□ -1.32
NUP98-203ENST00000359171 PDZD2O15018 2839 aa6.8□□□□□ -1.32
NUP98-203ENST00000359171 HRNRQ86YZ3 2850 aaPredicted RBP6.79□□□□□ -1.32
NUP98-203ENST00000359171 MXRA5Q9NR99 2828 aa6.69□□□□□ -1.34
NUP98-203ENST00000359171 PKD1L1Q8TDX9 2849 aa6.65□□□□□ -1.34
NUP98-203ENST00000359171 DNAH14Q0VDD8 3507 aa6.63□□□□□ -1.35
NUP98-203ENST00000359171 DMXL1Q9Y485 3027 aa6.61□□□□□ -1.35
NUP98-203ENST00000359171 USP34Q70CQ2 3546 aa6.61□□□□□ -1.35
NUP98-203ENST00000359171 KRTAP3-2Q9BYR7 98 aa6.6□□□□□ -1.35
NUP98-203ENST00000359171 CELSR1Q9NYQ6 3014 aa6.55□□□□□ -1.36
NUP98-203ENST00000359171 KRTAP3-3Q9BYR6 98 aa6.51□□□□□ -1.37
NUP98-203ENST00000359171 VWFP04275 2813 aa6.51□□□□□ -1.37
NUP98-203ENST00000359171 MYO15AQ9UKN7 3530 aa6.5□□□□□ -1.37
NUP98-203ENST00000359171 DMDP11532 3685 aa6.5□□□□□ -1.37
NUP98-203ENST00000359171 LOC400499M0QZD8 3231 aa6.5□□□□□ -1.37
NUP98-203ENST00000359171 KRTAP10-12P60413 245 aa6.5□□□□□ -1.37
NUP98-203ENST00000359171 MUC3AQ02505 3323 aa6.49□□□□□ -1.37
NUP98-203ENST00000359171 SRRM2Q9UQ35 2752 aaKnown RBP6.49□□□□□ -1.37
NUP98-203ENST00000359171 SPEGQ15772 3267 aa6.48□□□□□ -1.37
NUP98-203ENST00000359171 KRTAP23-1A1A580 65 aa6.46□□□□□ -1.37
NUP98-203ENST00000359171 WDFY3Q8IZQ1 3526 aa6.42□□□□□ -1.38
NUP98-203ENST00000359171 DCHS1Q96JQ0 3298 aa6.41□□□□□ -1.38
NUP98-203ENST00000359171 FBN1P35555 2871 aaKnown RBP6.4□□□□□ -1.38
NUP98-203ENST00000359171 KRTAP12-3P60328 96 aa6.38□□□□□ -1.39
NUP98-203ENST00000359171 MT1HL1P0DM35 61 aa6.38□□□□□ -1.39
NUP98-203ENST00000359171 CRCT1Q9UGL9 99 aa6.31□□□□□ -1.4
NUP98-203ENST00000359171 FBN3Q75N90 2809 aa6.27□□□□□ -1.41
NUP98-203ENST00000359171 ZFHX4Q86UP3 3567 aa6.24□□□□□ -1.41
NUP98-203ENST00000359171 MEGF8Q7Z7M0 2845 aa6.24□□□□□ -1.41
NUP98-203ENST00000359171 LCE3AQ5TA76 89 aa6.24□□□□□ -1.41
NUP98-203ENST00000359171 SPENQ96T58 3664 aaKnown RBP6.2□□□□□ -1.42
NUP98-203ENST00000359171 BSNQ9UPA5 3926 aa6.19□□□□□ -1.42
NUP98-203ENST00000359171 OTOGQ6ZRI0 2925 aa6.19□□□□□ -1.42
NUP98-203ENST00000359171 RELNP78509 3460 aa6.18□□□□□ -1.42
NUP98-203ENST00000359171 KRTAP10-4P60372 401 aaPredicted RBP6.16□□□□□ -1.42
NUP98-203ENST00000359171 ASPMQ8IZT6 3477 aa6.15□□□□□ -1.42
NUP98-203ENST00000359171 LORP23490 312 aaPredicted RBP6.06□□□□□ -1.44
NUP98-203ENST00000359171 LAMA5O15230 3695 aa6.05□□□□□ -1.44
NUP98-203ENST00000359171 COL7A1Q02388 2944 aa6.04□□□□□ -1.44
NUP98-203ENST00000359171 KRTAP10-5P60370 271 aa6.01□□□□□ -1.45
NUP98-203ENST00000359171 KRTAP4-5Q9BYR2 181 aa5.91□□□□□ -1.46
NUP98-203ENST00000359171 KRTAP8-1Q8IUC2 63 aa5.87□□□□□ -1.47
NUP98-203ENST00000359171 SMG1Q96Q15 3661 aaKnown RBP5.84□□□□□ -1.47
NUP98-203ENST00000359171 ZFHX3Q15911 3703 aa5.81□□□□□ -1.48
NUP98-203ENST00000359171 ANK3Q12955 4377 aaKnown RBP5.72□□□□□ -1.49
NUP98-203ENST00000359171 CSMD1Q96PZ7 3565 aa5.67□□□□□ -1.5
NUP98-203ENST00000359171 SPRR2GQ9BYE4 73 aa5.65□□□□□ -1.5
NUP98-203ENST00000359171 CUBNO60494 3623 aa5.64□□□□□ -1.51
NUP98-203ENST00000359171 HUWE1Q7Z6Z7 4374 aaKnown RBP5.62□□□□□ -1.51
NUP98-203ENST00000359171 AKAP9Q99996 3911 aa5.61□□□□□ -1.51
NUP98-203ENST00000359171 NBPF19A0A087WUL8 3843 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms