RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 KRTAP25-1Q3LHN0 102 aa2.45□□□□□ -2.02
SYNE2-204ENST00000358025 KRTAP10-3P60369 221 aa2.45□□□□□ -2.02
SYNE2-204ENST00000358025 RPL37P61927 97 aaKnown RBP2.44□□□□□ -2.02
SYNE2-204ENST00000358025 SZT2Q5T011 3432 aa2.44□□□□□ -2.02
SYNE2-204ENST00000358025 KRTAP10-11P60412 298 aa2.44□□□□□ -2.02
SYNE2-204ENST00000358025 HIVEP1P15822 2718 aa2.44□□□□□ -2.02
SYNE2-204ENST00000358025 VWFP04275 2813 aa2.43□□□□□ -2.02
SYNE2-204ENST00000358025 K7EIL1 84 aa2.43□□□□□ -2.02
SYNE2-204ENST00000358025 H1FX-AS1Q4G0G2 97 aa2.43□□□□□ -2.02
SYNE2-204ENST00000358025 Q8N1X5 172 aa2.42□□□□□ -2.02
SYNE2-204ENST00000358025 COL7A1Q02388 2944 aa2.42□□□□□ -2.02
SYNE2-204ENST00000358025 M0R2T5 61 aa2.42□□□□□ -2.02
SYNE2-204ENST00000358025 M0QZ58 72 aa2.41□□□□□ -2.02
SYNE2-204ENST00000358025 PKD1L1Q8TDX9 2849 aa2.41□□□□□ -2.02
SYNE2-204ENST00000358025 CASC10Q5T4H9 136 aa2.4□□□□□ -2.03
SYNE2-204ENST00000358025 PRAC1Q96KF2 57 aa2.4□□□□□ -2.03
SYNE2-204ENST00000358025 PANO1I0J062 215 aa2.39□□□□□ -2.03
SYNE2-204ENST00000358025 TGP01266 2768 aa2.39□□□□□ -2.03
SYNE2-204ENST00000358025 DNAH14Q0VDD8 3507 aa2.38□□□□□ -2.03
SYNE2-204ENST00000358025 KRTAP11-1Q8IUC1 163 aa2.38□□□□□ -2.03
SYNE2-204ENST00000358025 KRTAP7-1Q8IUC3 87 aa2.38□□□□□ -2.03
SYNE2-204ENST00000358025 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.38□□□□□ -2.03
SYNE2-204ENST00000358025 SRRM2Q9UQ35 2752 aaKnown RBP2.36□□□□□ -2.03
SYNE2-204ENST00000358025 TENM3Q9P273 2699 aa2.36□□□□□ -2.03
SYNE2-204ENST00000358025 Q6ZRN7 208 aaPredicted RBP2.36□□□□□ -2.03
SYNE2-204ENST00000358025 PP632Q6XCG6 107 aa2.36□□□□□ -2.03
SYNE2-204ENST00000358025 TENM4Q6N022 2769 aa2.36□□□□□ -2.03
SYNE2-204ENST00000358025 KRTAP13-3Q3SY46 172 aa2.35□□□□□ -2.03
SYNE2-204ENST00000358025 FBN1P35555 2871 aaKnown RBP2.35□□□□□ -2.03
SYNE2-204ENST00000358025 OTOGQ6ZRI0 2925 aa2.34□□□□□ -2.03
SYNE2-204ENST00000358025 A8MUU9 505 aa2.34□□□□□ -2.03
SYNE2-204ENST00000358025 C20orf166-AS1Q96NR2 134 aa2.33□□□□□ -2.04
SYNE2-204ENST00000358025 TENM1Q9UKZ4 2725 aa2.33□□□□□ -2.04
SYNE2-204ENST00000358025 USP34Q70CQ2 3546 aa2.33□□□□□ -2.04
SYNE2-204ENST00000358025 S4R3F8 94 aa2.32□□□□□ -2.04
SYNE2-204ENST00000358025 MEGF8Q7Z7M0 2845 aa2.32□□□□□ -2.04
SYNE2-204ENST00000358025 Q5VSD8 79 aa2.31□□□□□ -2.04
SYNE2-204ENST00000358025 Q6ZSA8 131 aa2.31□□□□□ -2.04
SYNE2-204ENST00000358025 TENM2Q9NT68 2774 aa2.3□□□□□ -2.04
SYNE2-204ENST00000358025 A8MU10 97 aa2.3□□□□□ -2.04
SYNE2-204ENST00000358025 KRTAP1-5Q9BYS1 174 aa2.3□□□□□ -2.04
SYNE2-204ENST00000358025 PLAC4Q8WY50 150 aa2.29□□□□□ -2.04
SYNE2-204ENST00000358025 H0YAA0 97 aa2.27□□□□□ -2.05
SYNE2-204ENST00000358025 ADM2Q7Z4H4 148 aa2.26□□□□□ -2.05
SYNE2-204ENST00000358025 FBN3Q75N90 2809 aa2.25□□□□□ -2.05
SYNE2-204ENST00000358025 A0A1B0GVY2 172 aa2.23□□□□□ -2.05
SYNE2-204ENST00000358025 P0C880 135 aa2.22□□□□□ -2.05
SYNE2-204ENST00000358025 KRTAP23-1A1A580 65 aa2.22□□□□□ -2.05
SYNE2-204ENST00000358025 R4GN34 69 aa2.21□□□□□ -2.06
SYNE2-204ENST00000358025 KRTAP10-1P60331 282 aa2.2□□□□□ -2.06
SYNE2-204ENST00000358025 KRTAP1-4P0C5Y4 121 aa2.19□□□□□ -2.06
SYNE2-204ENST00000358025 KRTAP10-2P60368 255 aa2.19□□□□□ -2.06
SYNE2-204ENST00000358025 KRTAP13-2Q52LG2 175 aa2.19□□□□□ -2.06
SYNE2-204ENST00000358025 TNP1P09430 55 aa2.19□□□□□ -2.06
SYNE2-204ENST00000358025 KRTAP21-3Q3LHN1 58 aa2.18□□□□□ -2.06
SYNE2-204ENST00000358025 TPRXLQ17RH7 258 aa2.12□□□□□ -2.07
SYNE2-204ENST00000358025 MYO15AQ9UKN7 3530 aa2.12□□□□□ -2.07
SYNE2-204ENST00000358025 KRTAP12-1P59990 96 aa2.12□□□□□ -2.07
SYNE2-204ENST00000358025 MUC3AQ02505 3323 aa2.11□□□□□ -2.07
SYNE2-204ENST00000358025 RELNP78509 3460 aa2.11□□□□□ -2.07
SYNE2-204ENST00000358025 CSMD1Q96PZ7 3565 aa2.11□□□□□ -2.07
SYNE2-204ENST00000358025 KRTAP15-1Q3LI76 137 aa2.1□□□□□ -2.07
SYNE2-204ENST00000358025 INE1O15225 51 aa2.09□□□□□ -2.07
SYNE2-204ENST00000358025 XP32Q5T750 250 aa2.09□□□□□ -2.07
SYNE2-204ENST00000358025 KRTAP10-6P60371 365 aaPredicted RBP2.08□□□□□ -2.08
SYNE2-204ENST00000358025 KRTAP10-8P60410 259 aa2.08□□□□□ -2.08
SYNE2-204ENST00000358025 KRTAP3-1Q9BYR8 98 aa2.07□□□□□ -2.08
SYNE2-204ENST00000358025 KRTAP13-4Q3LI77 160 aa2.07□□□□□ -2.08
SYNE2-204ENST00000358025 SPTBN5Q9NRC6 3674 aaKnown RBP2.07□□□□□ -2.08
SYNE2-204ENST00000358025 WDFY3Q8IZQ1 3526 aa2.06□□□□□ -2.08
SYNE2-204ENST00000358025 C10orf95Q9H7T3 257 aa2.04□□□□□ -2.08
SYNE2-204ENST00000358025 ALMS1Q8TCU4 4167 aa2.04□□□□□ -2.08
SYNE2-204ENST00000358025 KRTAP3-2Q9BYR7 98 aa2.03□□□□□ -2.08
SYNE2-204ENST00000358025 ASPMQ8IZT6 3477 aa2.02□□□□□ -2.09
SYNE2-204ENST00000358025 LAMA5O15230 3695 aa2.01□□□□□ -2.09
SYNE2-204ENST00000358025 KRTAP12-2P59991 146 aa2.01□□□□□ -2.09
SYNE2-204ENST00000358025 ZFHX4Q86UP3 3567 aa2.01□□□□□ -2.09
SYNE2-204ENST00000358025 DMDP11532 3685 aa2□□□□□ -2.09
SYNE2-204ENST00000358025 SMG1Q96Q15 3661 aaKnown RBP1.99□□□□□ -2.09
SYNE2-204ENST00000358025 PRO2289Q9P1D8 64 aa1.98□□□□□ -2.09
SYNE2-204ENST00000358025 KRTAP19-4Q3LI73 84 aa1.98□□□□□ -2.09
SYNE2-204ENST00000358025 KRTAP3-3Q9BYR6 98 aa1.98□□□□□ -2.09
SYNE2-204ENST00000358025 KRTAP10-10P60014 251 aa1.96□□□□□ -2.1
SYNE2-204ENST00000358025 BSNQ9UPA5 3926 aa1.95□□□□□ -2.1
SYNE2-204ENST00000358025 DNAH1Q9P2D7 4330 aa1.94□□□□□ -2.1
SYNE2-204ENST00000358025 TRRAPQ9Y4A5 3859 aa1.94□□□□□ -2.1
SYNE2-204ENST00000358025 CUBNO60494 3623 aa1.92□□□□□ -2.1
SYNE2-204ENST00000358025 NBPF19A0A087WUL8 3843 aa1.92□□□□□ -2.1
SYNE2-204ENST00000358025 CRCT1Q9UGL9 99 aa1.92□□□□□ -2.1
SYNE2-204ENST00000358025 ZNF469Q96JG9 3925 aaPredicted RBP1.9□□□□□ -2.1
SYNE2-204ENST00000358025 ZFHX3Q15911 3703 aa1.89□□□□□ -2.11
SYNE2-204ENST00000358025 CSMD2Q7Z408 3487 aa1.89□□□□□ -2.11
SYNE2-204ENST00000358025 SPENQ96T58 3664 aaKnown RBP1.89□□□□□ -2.11
SYNE2-204ENST00000358025 AKAP9Q99996 3911 aa1.89□□□□□ -2.11
SYNE2-204ENST00000358025 KRTAP10-4P60372 401 aaPredicted RBP1.86□□□□□ -2.11
SYNE2-204ENST00000358025 MT3P25713 68 aa1.85□□□□□ -2.11
SYNE2-204ENST00000358025 SVEP1Q4LDE5 3571 aa1.85□□□□□ -2.11
SYNE2-204ENST00000358025 DNAH3Q8TD57 4116 aa1.84□□□□□ -2.11
SYNE2-204ENST00000358025 ANK3Q12955 4377 aaKnown RBP1.84□□□□□ -2.12
SYNE2-204ENST00000358025 SPRR5A0A1B0GTR4 108 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms