RNA–Protein interactions for RNA: ENST00000357867.8

FN1-205, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-205ENST00000357867 RPS29P62273 56 aaKnown RBP6.5□□□□□ -1.37
FN1-205ENST00000357867 Q8NDZ9 215 aa6.49□□□□□ -1.37
FN1-205ENST00000357867 Q8N9P0 234 aaPredicted RBP6.48□□□□□ -1.37
FN1-205ENST00000357867 LCA10Q71F78 164 aa6.47□□□□□ -1.37
FN1-205ENST00000357867 M0QZ58 72 aa6.46□□□□□ -1.37
FN1-205ENST00000357867 FBN2P35556 2912 aa6.45□□□□□ -1.38
FN1-205ENST00000357867 A0A087X002 238 aa6.45□□□□□ -1.38
FN1-205ENST00000357867 Q75L30 129 aa6.45□□□□□ -1.38
FN1-205ENST00000357867 LAMA5O15230 3695 aa6.43□□□□□ -1.38
FN1-205ENST00000357867 ADM2Q7Z4H4 148 aa6.41□□□□□ -1.38
FN1-205ENST00000357867 ASB16-AS1Q495Z4 193 aa6.41□□□□□ -1.38
FN1-205ENST00000357867 HRNRQ86YZ3 2850 aaPredicted RBP6.4□□□□□ -1.38
FN1-205ENST00000357867 PANO1I0J062 215 aa6.4□□□□□ -1.39
FN1-205ENST00000357867 H1FX-AS1Q4G0G2 97 aa6.4□□□□□ -1.39
FN1-205ENST00000357867 KRTAP4-16G5E9R7 235 aaPredicted RBP6.38□□□□□ -1.39
FN1-205ENST00000357867 ZFHX3Q15911 3703 aa6.38□□□□□ -1.39
FN1-205ENST00000357867 Q6ZRN7 208 aaPredicted RBP6.37□□□□□ -1.39
FN1-205ENST00000357867 RPL37P61927 97 aaKnown RBP6.37□□□□□ -1.39
FN1-205ENST00000357867 LINC01558Q9Y6Z2 57 aa6.37□□□□□ -1.39
FN1-205ENST00000357867 TENM3Q9P273 2699 aa6.31□□□□□ -1.4
FN1-205ENST00000357867 ROMO1P60602 79 aa6.29□□□□□ -1.4
FN1-205ENST00000357867 Q5XG85 94 aa6.28□□□□□ -1.4
FN1-205ENST00000357867 C20orf166-AS1Q96NR2 134 aa6.28□□□□□ -1.4
FN1-205ENST00000357867 PKD1L1Q8TDX9 2849 aa6.27□□□□□ -1.41
FN1-205ENST00000357867 DCHS1Q96JQ0 3298 aa6.26□□□□□ -1.41
FN1-205ENST00000357867 A8MUU9 505 aa6.26□□□□□ -1.41
FN1-205ENST00000357867 DMDP11532 3685 aa6.26□□□□□ -1.41
FN1-205ENST00000357867 RELNP78509 3460 aa6.25□□□□□ -1.41
FN1-205ENST00000357867 MXRA5Q9NR99 2828 aa6.23□□□□□ -1.41
FN1-205ENST00000357867 SPENQ96T58 3664 aaKnown RBP6.22□□□□□ -1.41
FN1-205ENST00000357867 ZFHX4Q86UP3 3567 aa6.2□□□□□ -1.42
FN1-205ENST00000357867 VWFP04275 2813 aa6.19□□□□□ -1.42
FN1-205ENST00000357867 KRTAP11-1Q8IUC1 163 aa6.18□□□□□ -1.42
FN1-205ENST00000357867 Q5VV11 94 aa6.18□□□□□ -1.42
FN1-205ENST00000357867 TENM2Q9NT68 2774 aa6.17□□□□□ -1.42
FN1-205ENST00000357867 KRTAP13-2Q52LG2 175 aa6.17□□□□□ -1.42
FN1-205ENST00000357867 PDZD2O15018 2839 aa6.17□□□□□ -1.42
FN1-205ENST00000357867 A0A0A0MQY5 61 aa6.16□□□□□ -1.42
FN1-205ENST00000357867 NOTCH2NLQ7Z3S9 236 aa6.16□□□□□ -1.42
FN1-205ENST00000357867 TGP01266 2768 aa6.16□□□□□ -1.42
FN1-205ENST00000357867 KRTAP29-1A8MX34 341 aaPredicted RBP6.16□□□□□ -1.42
FN1-205ENST00000357867 KRTAP13-1Q8IUC0 172 aa6.14□□□□□ -1.43
FN1-205ENST00000357867 SPATA8Q6RVD6 105 aa6.14□□□□□ -1.43
FN1-205ENST00000357867 CSMD1Q96PZ7 3565 aa6.11□□□□□ -1.43
FN1-205ENST00000357867 KRTAP7-1Q8IUC3 87 aa6.06□□□□□ -1.44
FN1-205ENST00000357867 SMG1Q96Q15 3661 aaKnown RBP6.05□□□□□ -1.44
FN1-205ENST00000357867 TNP1P09430 55 aa6.05□□□□□ -1.44
FN1-205ENST00000357867 TPRXLQ17RH7 258 aa6.04□□□□□ -1.44
FN1-205ENST00000357867 MUC3AQ02505 3323 aa6.03□□□□□ -1.44
FN1-205ENST00000357867 COL7A1Q02388 2944 aa6.02□□□□□ -1.44
FN1-205ENST00000357867 CYSTM1Q9H1C7 97 aa6.02□□□□□ -1.45
FN1-205ENST00000357867 BSNQ9UPA5 3926 aa6□□□□□ -1.45
FN1-205ENST00000357867 PRAC1Q96KF2 57 aa5.99□□□□□ -1.45
FN1-205ENST00000357867 XP32Q5T750 250 aa5.97□□□□□ -1.45
FN1-205ENST00000357867 PRO2289Q9P1D8 64 aa5.97□□□□□ -1.45
FN1-205ENST00000357867 KRTAP10-8P60410 259 aa5.93□□□□□ -1.46
FN1-205ENST00000357867 TRRAPQ9Y4A5 3859 aa5.91□□□□□ -1.46
FN1-205ENST00000357867 KRTAP10-10P60014 251 aa5.9□□□□□ -1.46
FN1-205ENST00000357867 VPS13CQ709C8 3753 aa5.89□□□□□ -1.47
FN1-205ENST00000357867 KRTAP1-4P0C5Y4 121 aa5.89□□□□□ -1.47
FN1-205ENST00000357867 A0A1B0GVY2 172 aa5.87□□□□□ -1.47
FN1-205ENST00000357867 A8MU10 97 aa5.87□□□□□ -1.47
FN1-205ENST00000357867 FBN1P35555 2871 aaKnown RBP5.87□□□□□ -1.47
FN1-205ENST00000357867 SVEP1Q4LDE5 3571 aa5.86□□□□□ -1.47
FN1-205ENST00000357867 PP632Q6XCG6 107 aa5.81□□□□□ -1.48
FN1-205ENST00000357867 KRTAP25-1Q3LHN0 102 aa5.79□□□□□ -1.48
FN1-205ENST00000357867 KRTAP13-3Q3SY46 172 aa5.79□□□□□ -1.48
FN1-205ENST00000357867 CUBNO60494 3623 aa5.78□□□□□ -1.48
FN1-205ENST00000357867 SRRM2Q9UQ35 2752 aaKnown RBP5.77□□□□□ -1.49
FN1-205ENST00000357867 C10orf95Q9H7T3 257 aa5.73□□□□□ -1.49
FN1-205ENST00000357867 CSMD2Q7Z408 3487 aa5.73□□□□□ -1.49
FN1-205ENST00000357867 MEGF8Q7Z7M0 2845 aa5.72□□□□□ -1.49
FN1-205ENST00000357867 AKAP9Q99996 3911 aa5.7□□□□□ -1.5
FN1-205ENST00000357867 OTOGQ6ZRI0 2925 aa5.67□□□□□ -1.5
FN1-205ENST00000357867 H3BS24 57 aa5.67□□□□□ -1.5
FN1-205ENST00000357867 FBN3Q75N90 2809 aa5.65□□□□□ -1.5
FN1-205ENST00000357867 A6NN06 94 aa5.61□□□□□ -1.51
FN1-205ENST00000357867 KRTAP16-1A8MUX0 517 aa5.61□□□□□ -1.51
FN1-205ENST00000357867 ZNF469Q96JG9 3925 aaPredicted RBP5.61□□□□□ -1.51
FN1-205ENST00000357867 H0YAA0 97 aa5.52□□□□□ -1.53
FN1-205ENST00000357867 NDUFAF8A1L188 74 aa5.49□□□□□ -1.53
FN1-205ENST00000357867 ANK3Q12955 4377 aaKnown RBP5.48□□□□□ -1.53
FN1-205ENST00000357867 P0C880 135 aa5.47□□□□□ -1.53
FN1-205ENST00000357867 CSMD3Q7Z407 3707 aa5.47□□□□□ -1.53
FN1-205ENST00000357867 ALMS1Q8TCU4 4167 aa5.33□□□□□ -1.56
FN1-205ENST00000357867 KRTAP13-4Q3LI77 160 aa5.29□□□□□ -1.56
FN1-205ENST00000357867 HUWE1Q7Z6Z7 4374 aaKnown RBP5.27□□□□□ -1.57
FN1-205ENST00000357867 KRTAP12-2P59991 146 aa5.24□□□□□ -1.57
FN1-205ENST00000357867 DNAH1Q9P2D7 4330 aa5.2□□□□□ -1.58
FN1-205ENST00000357867 KRTAP12-1P59990 96 aa5.16□□□□□ -1.58
FN1-205ENST00000357867 KRTAP15-1Q3LI76 137 aa5.14□□□□□ -1.59
FN1-205ENST00000357867 MT1HL1P0DM35 61 aa5.13□□□□□ -1.59
FN1-205ENST00000357867 LYSTQ99698 3801 aa5.13□□□□□ -1.59
FN1-205ENST00000357867 DNAH3Q8TD57 4116 aa5.09□□□□□ -1.59
FN1-205ENST00000357867 DNAH7Q8WXX0 4024 aa5.08□□□□□ -1.6
FN1-205ENST00000357867 KMT2AQ03164 3969 aa5.08□□□□□ -1.6
FN1-205ENST00000357867 CMYA5Q8N3K9 4069 aa5.07□□□□□ -1.6
FN1-205ENST00000357867 KRTAP3-1Q9BYR8 98 aa5.04□□□□□ -1.6
FN1-205ENST00000357867 KRTAP4-5Q9BYR2 181 aa5.01□□□□□ -1.61
FN1-205ENST00000357867 KRTAP10-12P60413 245 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms