RNA–Protein interactions for RNA: ENST00000356861.9

TNPO2-201, Transcript of transportin 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNPO2, Length 4,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-201ENST00000356861 LOC400499M0QZD8 3231 aa10.52□□□□□ -0.73
TNPO2-201ENST00000356861 USP34Q70CQ2 3546 aa10.48□□□□□ -0.73
TNPO2-201ENST00000356861 ASB16-AS1Q495Z4 193 aa10.48□□□□□ -0.73
TNPO2-201ENST00000356861 CAMK2N1Q7Z7J9 78 aa10.48□□□□□ -0.73
TNPO2-201ENST00000356861 PRAC1Q96KF2 57 aa10.48□□□□□ -0.73
TNPO2-201ENST00000356861 NF1P21359 2839 aa10.47□□□□□ -0.73
TNPO2-201ENST00000356861 KRTAP13-1Q8IUC0 172 aa10.46□□□□□ -0.74
TNPO2-201ENST00000356861 CRYBG3Q68DQ2 2970 aa10.43□□□□□ -0.74
TNPO2-201ENST00000356861 FBN2P35556 2912 aa10.43□□□□□ -0.74
TNPO2-201ENST00000356861 SEC61BP60468 96 aaKnown RBP10.41□□□□□ -0.74
TNPO2-201ENST00000356861 R4GN34 69 aa10.36□□□□□ -0.75
TNPO2-201ENST00000356861 RPL37P61927 97 aaKnown RBP10.34□□□□□ -0.75
TNPO2-201ENST00000356861 M0R2T5 61 aa10.34□□□□□ -0.75
TNPO2-201ENST00000356861 RPS29P62273 56 aaKnown RBP10.33□□□□□ -0.76
TNPO2-201ENST00000356861 H1FX-AS1Q4G0G2 97 aa10.33□□□□□ -0.76
TNPO2-201ENST00000356861 KRTAP13-2Q52LG2 175 aa10.32□□□□□ -0.76
TNPO2-201ENST00000356861 LUZP6Q538Z0 58 aa10.31□□□□□ -0.76
TNPO2-201ENST00000356861 SPATA8Q6RVD6 105 aa10.21□□□□□ -0.77
TNPO2-201ENST00000356861 ROMO1P60602 79 aa10.2□□□□□ -0.78
TNPO2-201ENST00000356861 MXRA5Q9NR99 2828 aa10.2□□□□□ -0.78
TNPO2-201ENST00000356861 MYO15AQ9UKN7 3530 aa10.19□□□□□ -0.78
TNPO2-201ENST00000356861 M0QZ58 72 aa10.17□□□□□ -0.78
TNPO2-201ENST00000356861 ADM2Q7Z4H4 148 aa10.13□□□□□ -0.79
TNPO2-201ENST00000356861 TENM3Q9P273 2699 aa10.08□□□□□ -0.8
TNPO2-201ENST00000356861 A6NN06 94 aa10.03□□□□□ -0.8
TNPO2-201ENST00000356861 KRTAP21-3Q3LHN1 58 aa10.03□□□□□ -0.8
TNPO2-201ENST00000356861 CELSR1Q9NYQ6 3014 aa10.01□□□□□ -0.81
TNPO2-201ENST00000356861 RELNP78509 3460 aa9.99□□□□□ -0.81
TNPO2-201ENST00000356861 TENM1Q9UKZ4 2725 aa9.98□□□□□ -0.81
TNPO2-201ENST00000356861 DCHS1Q96JQ0 3298 aa9.97□□□□□ -0.81
TNPO2-201ENST00000356861 A8MU10 97 aa9.96□□□□□ -0.82
TNPO2-201ENST00000356861 A8MUU9 505 aa9.95□□□□□ -0.82
TNPO2-201ENST00000356861 C20orf166-AS1Q96NR2 134 aa9.92□□□□□ -0.82
TNPO2-201ENST00000356861 KRTAP1-4P0C5Y4 121 aa9.91□□□□□ -0.82
TNPO2-201ENST00000356861 H3BS24 57 aa9.87□□□□□ -0.83
TNPO2-201ENST00000356861 WDFY3Q8IZQ1 3526 aa9.83□□□□□ -0.84
TNPO2-201ENST00000356861 KRTAP25-1Q3LHN0 102 aa9.81□□□□□ -0.84
TNPO2-201ENST00000356861 PLAC4Q8WY50 150 aa9.8□□□□□ -0.84
TNPO2-201ENST00000356861 TENM2Q9NT68 2774 aa9.78□□□□□ -0.84
TNPO2-201ENST00000356861 PKD1L1Q8TDX9 2849 aa9.75□□□□□ -0.85
TNPO2-201ENST00000356861 A0A0A0MQY5 61 aa9.74□□□□□ -0.85
TNPO2-201ENST00000356861 PDZD2O15018 2839 aa9.74□□□□□ -0.85
TNPO2-201ENST00000356861 LAMA5O15230 3695 aa9.72□□□□□ -0.85
TNPO2-201ENST00000356861 TGP01266 2768 aa9.66□□□□□ -0.86
TNPO2-201ENST00000356861 ZFHX4Q86UP3 3567 aa9.66□□□□□ -0.86
TNPO2-201ENST00000356861 ASPMQ8IZT6 3477 aa9.66□□□□□ -0.86
TNPO2-201ENST00000356861 KRTAP16-1A8MUX0 517 aa9.65□□□□□ -0.86
TNPO2-201ENST00000356861 XP32Q5T750 250 aa9.64□□□□□ -0.87
TNPO2-201ENST00000356861 FBN1P35555 2871 aaKnown RBP9.61□□□□□ -0.87
TNPO2-201ENST00000356861 MUC3AQ02505 3323 aa9.59□□□□□ -0.87
TNPO2-201ENST00000356861 VWFP04275 2813 aa9.59□□□□□ -0.87
TNPO2-201ENST00000356861 OTOGQ6ZRI0 2925 aa9.5□□□□□ -0.89
TNPO2-201ENST00000356861 H0YAA0 97 aa9.47□□□□□ -0.89
TNPO2-201ENST00000356861 DMDP11532 3685 aa9.45□□□□□ -0.9
TNPO2-201ENST00000356861 TPRXLQ17RH7 258 aa9.44□□□□□ -0.9
TNPO2-201ENST00000356861 KRTAP13-3Q3SY46 172 aa9.43□□□□□ -0.9
TNPO2-201ENST00000356861 CSMD1Q96PZ7 3565 aa9.42□□□□□ -0.9
TNPO2-201ENST00000356861 TNP1P09430 55 aa9.41□□□□□ -0.9
TNPO2-201ENST00000356861 SMG1Q96Q15 3661 aaKnown RBP9.36□□□□□ -0.91
TNPO2-201ENST00000356861 NDUFAF8A1L188 74 aa9.34□□□□□ -0.91
TNPO2-201ENST00000356861 NBPF19A0A087WUL8 3843 aa9.32□□□□□ -0.92
TNPO2-201ENST00000356861 A0A1B0GVY2 172 aa9.29□□□□□ -0.92
TNPO2-201ENST00000356861 KRTAP10-8P60410 259 aa9.28□□□□□ -0.92
TNPO2-201ENST00000356861 C10orf95Q9H7T3 257 aa9.27□□□□□ -0.93
TNPO2-201ENST00000356861 P0C880 135 aa9.25□□□□□ -0.93
TNPO2-201ENST00000356861 ZFHX3Q15911 3703 aa9.24□□□□□ -0.93
TNPO2-201ENST00000356861 PP632Q6XCG6 107 aa9.23□□□□□ -0.93
TNPO2-201ENST00000356861 SRRM2Q9UQ35 2752 aaKnown RBP9.21□□□□□ -0.93
TNPO2-201ENST00000356861 SVEP1Q4LDE5 3571 aa9.17□□□□□ -0.94
TNPO2-201ENST00000356861 FBN3Q75N90 2809 aa9.17□□□□□ -0.94
TNPO2-201ENST00000356861 CUBNO60494 3623 aa9.08□□□□□ -0.96
TNPO2-201ENST00000356861 CSMD2Q7Z408 3487 aa9.08□□□□□ -0.96
TNPO2-201ENST00000356861 ANK3Q12955 4377 aaKnown RBP9.04□□□□□ -0.96
TNPO2-201ENST00000356861 MEGF8Q7Z7M0 2845 aa8.98□□□□□ -0.97
TNPO2-201ENST00000356861 KRTAP10-10P60014 251 aa8.98□□□□□ -0.97
TNPO2-201ENST00000356861 SPENQ96T58 3664 aaKnown RBP8.97□□□□□ -0.97
TNPO2-201ENST00000356861 KRTAP3-1Q9BYR8 98 aa8.94□□□□□ -0.98
TNPO2-201ENST00000356861 TRRAPQ9Y4A5 3859 aa8.93□□□□□ -0.98
TNPO2-201ENST00000356861 COL7A1Q02388 2944 aa8.92□□□□□ -0.98
TNPO2-201ENST00000356861 KRTAP12-2P59991 146 aa8.86□□□□□ -0.99
TNPO2-201ENST00000356861 BSNQ9UPA5 3926 aa8.78□□□□□ -1
TNPO2-201ENST00000356861 PRO2289Q9P1D8 64 aa8.77□□□□□ -1.01
TNPO2-201ENST00000356861 KRTAP12-1P59990 96 aa8.77□□□□□ -1.01
TNPO2-201ENST00000356861 KRTAP10-6P60371 365 aaPredicted RBP8.66□□□□□ -1.02
TNPO2-201ENST00000356861 KRTAP13-4Q3LI77 160 aa8.65□□□□□ -1.02
TNPO2-201ENST00000356861 MT1HL1P0DM35 61 aa8.56□□□□□ -1.04
TNPO2-201ENST00000356861 KRTAP10-4P60372 401 aaPredicted RBP8.48□□□□□ -1.05
TNPO2-201ENST00000356861 HUWE1Q7Z6Z7 4374 aaKnown RBP8.46□□□□□ -1.05
TNPO2-201ENST00000356861 VPS13CQ709C8 3753 aa8.43□□□□□ -1.06
TNPO2-201ENST00000356861 KRTAP3-3Q9BYR6 98 aa8.4□□□□□ -1.06
TNPO2-201ENST00000356861 KRTAP3-2Q9BYR7 98 aa8.39□□□□□ -1.07
TNPO2-201ENST00000356861 KRTAP4-5Q9BYR2 181 aa8.2□□□□□ -1.1
TNPO2-201ENST00000356861 ZNF469Q96JG9 3925 aaPredicted RBP8.17□□□□□ -1.1
TNPO2-201ENST00000356861 CSMD3Q7Z407 3707 aa8.11□□□□□ -1.11
TNPO2-201ENST00000356861 DNAH9Q9NYC9 4486 aa8.1□□□□□ -1.11
TNPO2-201ENST00000356861 KRTAP15-1Q3LI76 137 aa8.1□□□□□ -1.11
TNPO2-201ENST00000356861 DNAH5Q8TE73 4624 aa8.02□□□□□ -1.13
TNPO2-201ENST00000356861 AKAP9Q99996 3911 aa7.98□□□□□ -1.13
TNPO2-201ENST00000356861 ALMS1Q8TCU4 4167 aa7.97□□□□□ -1.13
TNPO2-201ENST00000356861 PLECQ15149 4684 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms