RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 KRTAP7-1Q8IUC3 87 aa6.33□□□□□ -1.4
SPTBN1-202ENST00000356805 LRBAP50851 2863 aa6.33□□□□□ -1.4
SPTBN1-202ENST00000356805 A0A1B0GVY2 172 aa6.32□□□□□ -1.4
SPTBN1-202ENST00000356805 KRTAP13-2Q52LG2 175 aa6.31□□□□□ -1.4
SPTBN1-202ENST00000356805 SPEGQ15772 3267 aa6.3□□□□□ -1.4
SPTBN1-202ENST00000356805 CHD9Q3L8U1 2897 aa6.3□□□□□ -1.4
SPTBN1-202ENST00000356805 CFAP47Q6ZTR5 3102 aa6.29□□□□□ -1.4
SPTBN1-202ENST00000356805 ASH1LQ9NR48 2969 aaKnown RBP6.29□□□□□ -1.4
SPTBN1-202ENST00000356805 Q6ZRN7 208 aaPredicted RBP6.28□□□□□ -1.4
SPTBN1-202ENST00000356805 USP34Q70CQ2 3546 aa6.28□□□□□ -1.4
SPTBN1-202ENST00000356805 P0C880 135 aa6.27□□□□□ -1.4
SPTBN1-202ENST00000356805 DMXL2Q8TDJ6 3036 aa6.24□□□□□ -1.41
SPTBN1-202ENST00000356805 HTTP42858 3142 aa6.23□□□□□ -1.41
SPTBN1-202ENST00000356805 H0YAA0 97 aa6.22□□□□□ -1.41
SPTBN1-202ENST00000356805 VCANP13611 3396 aa6.22□□□□□ -1.41
SPTBN1-202ENST00000356805 LAMA1P25391 3075 aa6.22□□□□□ -1.41
SPTBN1-202ENST00000356805 FLNCQ14315 2725 aa6.21□□□□□ -1.42
SPTBN1-202ENST00000356805 COL12A1Q99715 3063 aa6.21□□□□□ -1.42
SPTBN1-202ENST00000356805 HIVEP1P15822 2718 aa6.2□□□□□ -1.42
SPTBN1-202ENST00000356805 FRYLO94915 3013 aa6.19□□□□□ -1.42
SPTBN1-202ENST00000356805 NBEAQ8NFP9 2946 aa6.17□□□□□ -1.42
SPTBN1-202ENST00000356805 KRTAP10-10P60014 251 aa6.13□□□□□ -1.43
SPTBN1-202ENST00000356805 PRO2289Q9P1D8 64 aa6.12□□□□□ -1.43
SPTBN1-202ENST00000356805 BOD1L1Q8NFC6 3051 aa6.11□□□□□ -1.43
SPTBN1-202ENST00000356805 ATMQ13315 3056 aa6.11□□□□□ -1.43
SPTBN1-202ENST00000356805 TENM3Q9P273 2699 aa6.08□□□□□ -1.44
SPTBN1-202ENST00000356805 TGP01266 2768 aa6.08□□□□□ -1.44
SPTBN1-202ENST00000356805 XP32Q5T750 250 aa6.07□□□□□ -1.44
SPTBN1-202ENST00000356805 CELSR2Q9HCU4 2923 aa6.07□□□□□ -1.44
SPTBN1-202ENST00000356805 SPTBN5Q9NRC6 3674 aaKnown RBP6.07□□□□□ -1.44
SPTBN1-202ENST00000356805 ZZEF1O43149 2961 aa6.06□□□□□ -1.44
SPTBN1-202ENST00000356805 WDFY3Q8IZQ1 3526 aa6.03□□□□□ -1.44
SPTBN1-202ENST00000356805 ADGRG4Q8IZF6 3080 aa6.02□□□□□ -1.45
SPTBN1-202ENST00000356805 ASPMQ8IZT6 3477 aa6□□□□□ -1.45
SPTBN1-202ENST00000356805 TACC2O95359 2948 aa5.98□□□□□ -1.45
SPTBN1-202ENST00000356805 NF1P21359 2839 aa5.98□□□□□ -1.45
SPTBN1-202ENST00000356805 NBPF19A0A087WUL8 3843 aa5.96□□□□□ -1.46
SPTBN1-202ENST00000356805 MYO15AQ9UKN7 3530 aa5.95□□□□□ -1.46
SPTBN1-202ENST00000356805 TENM1Q9UKZ4 2725 aa5.95□□□□□ -1.46
SPTBN1-202ENST00000356805 KRTAP13-3Q3SY46 172 aa5.94□□□□□ -1.46
SPTBN1-202ENST00000356805 DCHS2Q6V1P9 2916 aa5.94□□□□□ -1.46
SPTBN1-202ENST00000356805 KRTAP1-4P0C5Y4 121 aa5.91□□□□□ -1.46
SPTBN1-202ENST00000356805 TPRXLQ17RH7 258 aa5.91□□□□□ -1.46
SPTBN1-202ENST00000356805 DMXL1Q9Y485 3027 aa5.91□□□□□ -1.46
SPTBN1-202ENST00000356805 LOC400499M0QZD8 3231 aa5.9□□□□□ -1.46
SPTBN1-202ENST00000356805 ZANQ9Y493 2812 aa5.9□□□□□ -1.46
SPTBN1-202ENST00000356805 TNRC18O15417 2968 aaPredicted RBP5.89□□□□□ -1.47
SPTBN1-202ENST00000356805 TENM4Q6N022 2769 aa5.88□□□□□ -1.47
SPTBN1-202ENST00000356805 DCHS1Q96JQ0 3298 aa5.88□□□□□ -1.47
SPTBN1-202ENST00000356805 PDZD2O15018 2839 aa5.87□□□□□ -1.47
SPTBN1-202ENST00000356805 ZFHX4Q86UP3 3567 aa5.87□□□□□ -1.47
SPTBN1-202ENST00000356805 CELSR1Q9NYQ6 3014 aa5.86□□□□□ -1.47
SPTBN1-202ENST00000356805 LAMA5O15230 3695 aa5.86□□□□□ -1.47
SPTBN1-202ENST00000356805 EYSQ5T1H1 3165 aa5.85□□□□□ -1.47
SPTBN1-202ENST00000356805 KRTAP21-3Q3LHN1 58 aa5.77□□□□□ -1.49
SPTBN1-202ENST00000356805 KRTAP12-2P59991 146 aa5.77□□□□□ -1.49
SPTBN1-202ENST00000356805 KRTAP13-4Q3LI77 160 aa5.77□□□□□ -1.49
SPTBN1-202ENST00000356805 FBN2P35556 2912 aa5.75□□□□□ -1.49
SPTBN1-202ENST00000356805 CSMD1Q96PZ7 3565 aa5.73□□□□□ -1.49
SPTBN1-202ENST00000356805 INE1O15225 51 aa5.71□□□□□ -1.5
SPTBN1-202ENST00000356805 HRNRQ86YZ3 2850 aaPredicted RBP5.7□□□□□ -1.5
SPTBN1-202ENST00000356805 TENM2Q9NT68 2774 aa5.67□□□□□ -1.5
SPTBN1-202ENST00000356805 KRTAP12-1P59990 96 aa5.66□□□□□ -1.5
SPTBN1-202ENST00000356805 RELNP78509 3460 aa5.66□□□□□ -1.5
SPTBN1-202ENST00000356805 SPENQ96T58 3664 aaKnown RBP5.65□□□□□ -1.5
SPTBN1-202ENST00000356805 KRTAP15-1Q3LI76 137 aa5.64□□□□□ -1.51
SPTBN1-202ENST00000356805 MXRA5Q9NR99 2828 aa5.63□□□□□ -1.51
SPTBN1-202ENST00000356805 VWFP04275 2813 aa5.62□□□□□ -1.51
SPTBN1-202ENST00000356805 SMG1Q96Q15 3661 aaKnown RBP5.62□□□□□ -1.51
SPTBN1-202ENST00000356805 SRRM2Q9UQ35 2752 aaKnown RBP5.59□□□□□ -1.52
SPTBN1-202ENST00000356805 PKD1L1Q8TDX9 2849 aa5.57□□□□□ -1.52
SPTBN1-202ENST00000356805 DMDP11532 3685 aa5.53□□□□□ -1.52
SPTBN1-202ENST00000356805 CRCT1Q9UGL9 99 aa5.51□□□□□ -1.53
SPTBN1-202ENST00000356805 ZFHX3Q15911 3703 aa5.5□□□□□ -1.53
SPTBN1-202ENST00000356805 KRTAP3-1Q9BYR8 98 aa5.47□□□□□ -1.53
SPTBN1-202ENST00000356805 KRTAP10-6P60371 365 aaPredicted RBP5.46□□□□□ -1.54
SPTBN1-202ENST00000356805 SVEP1Q4LDE5 3571 aa5.37□□□□□ -1.55
SPTBN1-202ENST00000356805 KRTAP23-1A1A580 65 aa5.36□□□□□ -1.55
SPTBN1-202ENST00000356805 CUBNO60494 3623 aa5.36□□□□□ -1.55
SPTBN1-202ENST00000356805 MEGF8Q7Z7M0 2845 aa5.35□□□□□ -1.55
SPTBN1-202ENST00000356805 COL7A1Q02388 2944 aa5.3□□□□□ -1.56
SPTBN1-202ENST00000356805 VPS13CQ709C8 3753 aa5.3□□□□□ -1.56
SPTBN1-202ENST00000356805 FBN3Q75N90 2809 aa5.29□□□□□ -1.56
SPTBN1-202ENST00000356805 KRTAP10-12P60413 245 aa5.25□□□□□ -1.57
SPTBN1-202ENST00000356805 KRTAP3-2Q9BYR7 98 aa5.22□□□□□ -1.57
SPTBN1-202ENST00000356805 TRRAPQ9Y4A5 3859 aa5.21□□□□□ -1.57
SPTBN1-202ENST00000356805 MUC3AQ02505 3323 aa5.21□□□□□ -1.58
SPTBN1-202ENST00000356805 CSMD3Q7Z407 3707 aa5.2□□□□□ -1.58
SPTBN1-202ENST00000356805 FBN1P35555 2871 aaKnown RBP5.16□□□□□ -1.58
SPTBN1-202ENST00000356805 KRTAP3-3Q9BYR6 98 aa5.13□□□□□ -1.59
SPTBN1-202ENST00000356805 CSMD2Q7Z408 3487 aa5.08□□□□□ -1.6
SPTBN1-202ENST00000356805 AKAP9Q99996 3911 aa5.06□□□□□ -1.6
SPTBN1-202ENST00000356805 BSNQ9UPA5 3926 aa5.05□□□□□ -1.6
SPTBN1-202ENST00000356805 KRTAP12-3P60328 96 aa5.04□□□□□ -1.6
SPTBN1-202ENST00000356805 KRTAP10-5P60370 271 aa5.02□□□□□ -1.61
SPTBN1-202ENST00000356805 LCE3AQ5TA76 89 aa4.99□□□□□ -1.61
SPTBN1-202ENST00000356805 OTOGQ6ZRI0 2925 aa4.95□□□□□ -1.62
SPTBN1-202ENST00000356805 ANK3Q12955 4377 aaKnown RBP4.89□□□□□ -1.63
SPTBN1-202ENST00000356805 KRTAP8-1Q8IUC2 63 aa4.88□□□□□ -1.63
SPTBN1-202ENST00000356805 MT1HL1P0DM35 61 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms